RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 PdgfraP26618 1089 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Slc11a2P49282 568 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 GaltQ03249 379 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Col19a1Q0VF58 1136 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 ZufspQ3T9Z9 577 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Tmem45aQ60774 273 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 AmphQ7TQF7 686 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Znf598Q80YR4 908 aaKnown RBP7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Gjc2Q8BQU6 440 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Wdr27Q8C5V5 780 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Apol7cQ8C6E1 369 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Etv3Q8R4Z4 513 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Erlin1Q91X78 346 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 ToporslQ9D2F8 683 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Ddit4Q9D3F7 229 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 CitP49025 2055 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 BC025446A0A087WQT1 134 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Zfp850J3QPC5 689 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Dmp1O55188 503 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 PfkmP47857 780 aaKnown RBP7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 TankP70347 448 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 9130409I23RikQ3TS87 320 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Trim38Q5SZ99 471 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Ccdc25Q78PG9 208 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Spag7Q7TNE3 227 aaKnown RBP7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Enpp4Q8BTJ4 456 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Ttc24Q8BYG0 334 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Ftsj1Q8CBC7 324 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Mill1Q8HWE7 395 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Acvr1cQ8K348 493 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 OafQ8QZR4 282 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Cgref1Q8R1U2 281 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Angel1Q8VCU0 667 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Synpo2Q91YE8 1087 aaKnown RBP7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Q922M7 232 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Q9D4A5 307 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Rabl3Q9D4V7 236 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Satl1Q9D5N8 744 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Irx5Q9JKQ4 484 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Bmp15Q9Z0L4 392 aa7.83□□□□□ -1.16
Usp40-204ENSMUST00000187758 Cacna2d1O08532 1103 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Oaz2O08608 189 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Ptpn9O35239 593 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Dsg3O35902 993 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Ndufaf2Q59J78 168 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Krt12Q64291 487 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Tsga10Q6NY15 697 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Ugt2b1Q8R084 529 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 SarafQ8R3Q0 334 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Pcdha10Q91Y20 946 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Mettl13Q91YR5 698 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Sh2b1Q91ZM2 756 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Pin4Q9CWW6 131 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Rexo2Q9D8S4 237 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Hsd3b7Q9EQC1 369 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Cpxm1Q9Z100 722 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Ssxb9A2BI93 185 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Gm21293E9Q4G9 266 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Sypl2O89104 264 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Enpp1P06802 906 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Hsd17b1P51656 344 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 CtswP56203 371 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Itga11P61622 1188 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Gsdmc2Q2KHK6 480 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 March5Q3KNM2 278 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Fam107bQ3TGF2 131 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Gsdmc4Q3TR54 480 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Ubn1Q4G0F8 1135 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Gm4952Q5FW57 296 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Grm6Q5NCH9 871 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Myo6Q64331 1265 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Baiap3Q80TT2 1134 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Trub1Q8C0D0 338 aaKnown RBP7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Fam118bQ8C569 351 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Uba6Q8C7R4 1053 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Gsdmc3Q8CB12 480 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Zmiz2Q8CIE2 920 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Ccdc65Q8VHI7 493 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Kdelr1Q99JH8 212 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Prl2a1Q9JHK0 228 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 PlekQ9JHK5 350 aaKnown RBP7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Nfu1Q9QZ23 255 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Slc22a3Q9WTW5 551 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Zfp236S4R299 1847 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Ism1A2ATD1 454 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Arhgap42B2RQE8 841 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Gm5483B2RV77 97 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 9330159F19RikD3Z623 648 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 C87414E9PWI7 475 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Slc12a2P55012 1205 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Fubp3Q3TIX6 575 aaKnown RBP7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Upf3aQ3ULJ3 422 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Dnajc1Q61712 552 aaKnown RBP7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Pick1Q62083 416 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Crtc1Q68ED7 630 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Rapgefl1Q68EF8 662 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 MyorgQ69ZQ1 716 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Best2Q8BGM5 508 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Sh3rf3Q8C120 878 aa7.82□□□□□ -1.16
Usp40-204ENSMUST00000187758 Kctd12bQ8C7J6 292 aa7.82□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms