RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Tssk3Q9D2E1 268 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 DcpsQ9DAR7 338 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Grk1Q9WVL4 564 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Gm21964A0A1W2P7S4 437 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Pnldc1B2RXZ1 531 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Tgm2P21981 686 aaKnown RBP16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 CratP47934 626 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Rhbdl3P58873 404 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Grm1P97772 1199 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 MyrfQ3UR85 1138 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Cpa1Q7TPZ8 419 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Rmnd5aQ80YQ8 391 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 SntnQ8C9X1 147 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 H2afy2Q8CCK0 372 aaKnown RBP16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Olfr866Q8VFI7 312 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Dpp3Q99KK7 738 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Gm5114W4VSN8 858 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Vmn2r5K7N788 911 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Hk2O08528 917 aaKnown RBP16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Nr1h4Q60641 488 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Deup1Q7M6Y5 601 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 ChfrQ810L3 664 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Trim14Q8BVW3 440 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Dennd2aQ8C4S8 1000 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Rev1Q920Q2 1249 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Rec114Q9CWH4 259 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Magea10A2AMW4 325 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Trim15G3UY57 292 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Slc38a5Q3U1J0 479 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Exoc3l4Q6DIA2 721 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 DcstampQ7TNJ0 470 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Pcsk9Q80W65 694 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Nipa1Q8BHK1 323 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Tcaf1Q8BNE1 924 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 TbcelQ8C5W3 424 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Fbxl13Q8CDU4 790 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Sugp1Q8CH02 643 aaKnown RBP16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Rxfp2Q91ZZ5 737 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Ifi30Q9ESY9 248 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Top3bQ9Z321 862 aaKnown RBP16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Pnpla7A2AJ88 1352 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Lilra5D3Z7A9 295 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 C1dO35473 141 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Fam83fQ3UKU4 495 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Gga3Q8BMI3 718 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Fam53cQ8BXQ8 393 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Nox1Q8CIZ9 591 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Smim11aQ99J19 55 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Kat2bQ9JHD1 813 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Entpd5Q9WUZ9 427 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Gm4869A0A1B0GSG7 984 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Zcchc7B1AX39 541 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Stmn3O70166 180 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 CidebO70303 219 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Traf2P39429 501 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Bace1P56818 501 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 NcstnP57716 708 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 CamkvQ3UHL1 512 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Nlrp9cQ66X01 1004 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Phf21aQ6ZPK0 659 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Siglec10Q80ZE3 688 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 E2f4Q8R0K9 410 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Nup85Q8R480 656 aaKnown RBP16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Txndc5Q91W90 417 aa16.02■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Vmn2r63E9Q0K5 859 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Gm9268E9Q0M3 861 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Vmn2r62K7N712 859 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Slc27a2O35488 620 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Srpk1O70551 648 aaKnown RBP16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Ets2P15037 468 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Cyp2c37P56654 490 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 PnocQ64387 187 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Zdhhc17Q80TN5 632 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 CyldQ80TQ2 952 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Rbbp8Q80YR6 893 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Senp7Q8BUH8 1037 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Tada1Q99LM9 335 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Elp3Q9CZX0 547 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Acsl4Q9QUJ7 711 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Cd97Q9Z0M6 818 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Gm5737A0A140LI11 423 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Tekt5G5E8A8 557 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Scgb2b19J3QM75 112 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Rgs2O08849 211 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 PigrO70570 771 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Zfp90Q61967 636 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Fbxo28Q8BIG4 368 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Tmco6Q8BQX5 494 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Tspan14Q8QZY6 270 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Fubp1Q91WJ8 651 aaKnown RBP16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Pfdn1Q9CWM4 122 aa16.02■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Olfr611K7N609 323 aa16.01■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Olfr612L7N462 323 aa16.01■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 GckP52792 465 aa16.01■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Lpar1P61793 364 aa16.01■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Hist2h2acQ64523 129 aa16.01■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Hist2h2aa1Q6GSS7 130 aaKnown RBP16.01■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Usp1Q8BJQ2 784 aa16.01■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 Kank2Q8BX02 843 aa16.01■□□□□ 0.15
Pcdha9-201ENSMUST00000115659 NlnQ91YP2 704 aa16.01■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms