RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Sema5bQ60519 1093 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Strip2Q8C9H6 844 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Nol6Q8R5K4 1152 aaKnown RBP16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 PtgisO35074 501 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 CybbQ61093 570 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Sdf4Q61112 361 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Klhdc10Q6PAR0 439 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Fcho1Q8K285 873 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ppp1r14cQ8R4S0 164 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Spon1Q8VCC9 807 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Olfr1499Q8VG65 314 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Serpina1fQ9DCQ7 411 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 E2f6O54917 272 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Zfy1P10925 782 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 CblP22682 913 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Mcm9Q2KHI9 1134 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Creb3Q61817 404 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Txndc8Q69AB2 127 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Olfr389Q7TRX7 312 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Tdp1Q8BJ37 609 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Kank2Q8BX02 843 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Tdrd7Q8K1H1 1086 aaKnown RBP16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Rasgef1cQ9D300 466 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Sept5Q9Z2Q6 369 aa16.08■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 PdgfraP26618 1089 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 ZufspQ3T9Z9 577 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Btg1-ps1Q3V0S2 161 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Btg1-ps2Q3V0X0 161 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Xlr3aQ60595 226 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Six2Q62232 296 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Tdpoz3Q717B4 365 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 ScocQ78YZ6 125 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Klhl2Q8JZP3 593 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Slc14a1Q8VHL0 384 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Lpgat1Q91YX5 370 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Polr3hQ9D2C6 204 aaKnown RBP16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Kbtbd12Q9D618 625 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Tada2bD3Z4Z0 420 aaKnown RBP16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Pms2P54279 859 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 OsbpQ3B7Z2 805 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Tmem237Q3V0J1 427 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Abi3bpQ59IW6 1179 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ddr2Q62371 854 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ythdf3Q8BYK6 585 aaKnown RBP16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Mzb1Q9D8I1 188 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Hsd3b7Q9EQC1 369 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Gm7694J3QNH8 270 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Tlx1P43345 332 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Xpo1Q6P5F9 1071 aaKnown RBP16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Rccd1Q8BTU7 377 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Zdhhc3Q8R173 299 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Atpaf2Q91YY4 289 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Q9CR55 154 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Lrp6O88572 1613 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Kndc1Q0KK55 1742 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Map7d3A2AEY4 876 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Vmn2r55G3UWZ4 781 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Vmn2r53L7N473 806 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Bmpr2O35607 1038 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Plk4Q64702 925 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Gga2Q6P5E6 603 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 TwnkQ8CIW5 685 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Asb7Q91ZU0 318 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Rgs10Q9CQE5 181 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Chit1Q9D7Q1 464 aa16.07■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Klc2O88448 599 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Elk3P41971 409 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Slc38a5Q3U1J0 479 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 HrQ61645 1182 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Cyp2d26Q8CIM7 500 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Mrpl47Q8K2Y7 252 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 EmcnQ9R0H2 261 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Nwd2Q6P5U7 1742 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 FancfE9Q5Z5 343 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Rdh7O88451 316 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Abi2P62484 446 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Q14AM7 275 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Trim75Q3UWZ0 467 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Map3k10Q66L42 940 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 PygbQ8CI94 843 aaKnown RBP16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Cox18Q8VC74 331 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Pqbp1Q91VJ5 263 aaKnown RBP16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 PodxlQ9R0M4 503 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Bmp15Q9Z0L4 392 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Scn4aQ9ER60 1841 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ism1A2ATD1 454 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Fam71aB7XG49 585 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Apold1E9Q0X2 246 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Cdh18E9Q9Q6 790 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Shoc2O88520 582 aaKnown RBP16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Rab17P35292 214 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ephb2P54763 986 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Gm136Q3V037 328 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Rbl2Q64700 1135 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Mtmr10Q7TPM9 771 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Ccdc90bQ8C3X2 256 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Epn2Q8CHU3 595 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Dync1li1Q8R1Q8 523 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Zswim7Q9CWQ2 152 aa16.06■□□□□ 0.16
Ccdc88b-201ENSMUST00000113440 Gm7942L7N277 499 aa16.06■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms