RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Gm10719E9Q7T3 227 aa22.13■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 ChkbO55229 394 aa22.13■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Zmym1Q3TJB1 983 aa22.13■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 B230104I21RikQ3USW4 141 aa22.13■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 DazlQ64368 298 aaKnown RBP22.13■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Akap7Q7TN79 314 aa22.13■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Lrrc1Q80VQ1 524 aa22.13■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Prpf39Q8K2Z2 665 aa22.13■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Raver1Q9CW46 748 aaKnown RBP22.13■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Prl2a1Q9JHK0 228 aa22.13■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Mapk13Q9Z1B7 366 aa22.13■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Sf3b1Q99NB9 1304 aaKnown RBP22.13■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Olfr1023A2ASU6 311 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Daw1D3Z7A5 415 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Gm5926E9PWJ8 236 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Bmpr1aP36895 532 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Gdf7P43029 461 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 GaltQ03249 379 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Fubp3Q3TIX6 575 aaKnown RBP22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Tmem26Q3UP23 366 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Gm4952Q5FW57 296 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Fcrl5Q68SN8 596 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Slc51bQ80WK2 128 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Tldc1Q8K0P3 455 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 McmbpQ8R3C0 642 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Pomgnt1Q91X88 660 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Lpin3Q99PI4 848 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 LactbQ9EP89 551 aa22.12■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Rasal2E9PW37 1286 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 C87414E9PWI7 475 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Gm10722F6VLK5 217 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Soat2O88908 525 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Krt19P19001 403 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 YwhazP63101 245 aaKnown RBP22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 March9Q3TZ87 348 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Upf3aQ3ULJ3 422 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Cyp2c66Q5GLZ0 490 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Shkbp1Q6P7W2 704 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Lrsam1Q80ZI6 727 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 D8Ertd738eQ8R1F0 94 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Spns2Q91VM4 549 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Kdelr1Q99JH8 212 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Atg7Q9D906 698 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 PlekQ9JHK5 350 aaKnown RBP22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Dclk1Q9JLM8 756 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Nfu1Q9QZ23 255 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Gm3409A0A0G2JE67 319 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Vmn2r84D3YWE3 849 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Serpinb9O08797 374 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Enpp1P06802 906 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Mtus1Q5HZI1 1210 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Znf185Q62394 352 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Zdhhc24Q6IR37 284 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Vwa2Q70UZ7 791 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Olfr1415Q7TQS4 311 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Pcsk9Q80W65 694 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Zmym6Q8BS54 1249 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Taf5Q8C092 801 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Trub1Q8C0D0 338 aaKnown RBP22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Apol7cQ8C6E1 369 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Olfr1416Q8VGU4 312 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Npffr2Q924H0 417 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Noxred1Q9D3S5 366 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Dlgap1Q9D415 992 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Fam3aQ9D8T0 230 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 TheglQ9DA15 459 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Abcg8Q9DBM0 673 aa22.11■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Pcdh7A0A0A6YY83 1255 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Ssxb9A2BI93 185 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Kdelc2G5E897 503 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Pbx3O35317 434 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Cldn5O54942 218 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Odc1P00860 461 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Oas1aP11928 367 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 DstykQ6XUX1 927 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Fut11Q8BHC9 489 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Stau2Q8CJ67 570 aaKnown RBP22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Ugt3a2Q8JZZ0 523 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Oas1gQ8K469 367 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Pcdhb19Q91Y01 801 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Cuedc2Q9CXX9 284 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Mgrn1Q9D074 532 aa22.1■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Gm36028A0A0U1RPM1 299 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Cer1O55233 272 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Ctnnal1O88327 731 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Ap2a2P17427 938 aaKnown RBP22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Lsp1P19973 330 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Hoxd8P23463 289 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Vav1P27870 845 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Hsd17b2P51658 381 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 TankP70347 448 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 GstcdQ5RL51 634 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Slc5a10Q5SWY8 596 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Mvb12bQ6KAU4 317 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 AmphQ7TQF7 686 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Gpt2Q8BGT5 522 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Lims2Q91XD2 341 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Mettl13Q91YR5 698 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Cep19Q9CQA8 163 aa22.09■■□□□ 1.13
Ccdc88a-202ENSMUST00000109477 Dcaf6Q9DC22 876 aa22.09■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms