RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Myl4P09541 193 aaKnown RBP12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cd247P24161 164 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 EndouQ3V188 412 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ctc1Q5SUQ9 1212 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Znf512Q69Z99 562 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 CslQ80X68 466 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Q8BZJ8 459 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Vmn1r188Q8K3N2 308 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Usp3Q91W36 520 aaKnown RBP12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Elp2Q91WG4 831 aaKnown RBP12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cyp4a12aQ91WL5 508 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ppp1r16aQ923M0 524 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Gtpbp4Q99ME9 634 aaKnown RBP12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cfap45Q9D9U9 551 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cables1Q9ESJ1 568 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 NumbQ9QZS3 653 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 IkbkeQ9R0T8 717 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Rasgrp1Q9Z1S3 795 aa12.76□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 PtprfA2A8L5 1898 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Lcn6A2AJB9 181 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 MndalD0QMC3 538 aaKnown RBP12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Rfx8D3YU81 596 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Olfr552E9Q545 317 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Spata31d1dE9Q5W2 1247 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cdh18E9Q9Q6 790 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Rad51ap2G3UW63 976 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Gja4P28235 333 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Pik3caP42337 1068 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cd244Q07763 397 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Stt3bQ3TDQ1 823 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Nudt18Q3U2V3 323 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Slc6a4Q60857 630 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ift88Q61371 824 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Igfbp7Q61581 281 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Creb3Q61817 404 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Tbc1d30Q69ZT9 766 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 MylkQ6PDN3 1941 aaKnown RBP12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Tas2r134Q7TQB0 298 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Zbtb42Q811H0 420 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Tmco3Q8BH01 678 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Il33Q8BVZ5 266 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 DrgxQ8BYH0 263 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Pcyox1lQ8C7K6 495 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Pitrm1Q8K411 1036 aaKnown RBP12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Olfr805Q8VFI4 319 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Olfr356Q8VFP5 315 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ppa2Q91VM9 330 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cyp2c70Q91W64 489 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Epn3Q91W69 636 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Sh2b1Q91ZM2 756 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Q9D4A5 307 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Nek3Q9R0A5 511 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Sgk1Q9WVC6 431 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cpxm1Q9Z100 722 aa12.75□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Wdr90Q6ZPG2 1874 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Fam81bA0A140LI28 432 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Rpl9-ps6A0A140T8T4 192 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Zscan4-ps3A0A1B0GRH6 506 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Nhsl2B1AXH1 854 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Zfp40B1B1D3 796 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 D3Z070 196 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 DgkdE9PUQ8 1220 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Wdr78E9PYY5 807 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Olfr1022L7MTT3 315 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Wisp1O54775 367 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Rc3h2P0C090 1187 aaKnown RBP12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 AgtP11859 477 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Nfkb1P25799 971 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 FynP39688 537 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 CenpcP49452 906 aaKnown RBP12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Rpl9P51410 192 aaKnown RBP12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Sh3bp1P55194 680 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Fermt1P59113 677 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cdh9P70407 786 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Zfp781Q0P5U5 243 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Mapk6Q61532 720 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Gpr17Q6NS65 339 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Heatr6Q6P1G0 1184 aaKnown RBP12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Pced1aQ6P1Z5 449 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 DgkqQ6P5E8 934 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Dhx40Q6PE54 779 aaKnown RBP12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Wdtc1Q80ZK9 677 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ankrd45Q810N6 248 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Arid5bQ8BM75 1188 aaKnown RBP12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Itpk1Q8BYN3 419 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ldlrap1Q8C142 308 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ttc27Q8CD92 847 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ccdc17Q8CE13 565 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Pcdhgb1Q91XX8 918 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Tgs1Q923W1 853 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Trmt11Q9CWH5 460 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 AticQ9CWJ9 592 aaKnown RBP12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 4931423N10RikQ9D4J9 382 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Rin2Q9D684 903 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Mzb1Q9D8I1 188 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Rwdd2aQ9D9S3 292 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Trpc7Q9WVC5 862 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Magi2Q9WVQ1 1275 aa12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Tjp2Q9Z0U1 1167 aaKnown RBP12.74□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Alms1Q8K4E0 3251 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms