RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Camk2aP11798 478 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gria2P23819 883 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Atxn10P28658 475 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 TtkP35761 856 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 PolgP54099 1218 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Polr3bP59470 1133 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Kdm7aQ3UWM4 940 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Spag8Q3V0Q6 470 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Xkr5Q5GH66 676 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ctnna2Q61301 953 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Pou4f2Q63934 411 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cacna2d2Q6PHS9 1154 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 ErasQ7TN89 227 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ints7Q7TQK1 966 aaKnown RBP9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Znf423Q80TS5 1292 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Impg2Q80XH2 1243 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 ToporsQ80Z37 1033 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Slc30a6Q8BJM5 460 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Bnc2Q8BMQ3 1127 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Scamp1Q8K021 338 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 RnpepQ8VCT3 650 aaKnown RBP9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Olfr393Q8VGR6 312 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 GhdcQ99J23 532 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Fam173bQ9D1Z3 247 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 MispQ9D279 648 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 MlklQ9D2Y4 472 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Prkar1aQ9DBC7 381 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Msgn1Q9JK54 188 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tp53bp1P70399 1969 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rab3gap2Q8BMG7 1366 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Eif3aP23116 1344 aaKnown RBP9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Arhgap33Q80YF9 1305 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm7086A0A1W2P766 342 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Lzts3A2AHG0 700 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Btbd2E9PUS2 523 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Krt90E9Q1Z0 538 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Nccrp1G3X9C2 266 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Dpysl2O08553 572 aaKnown RBP9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Pitpnm1O35954 1243 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 TpmtO55060 240 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Sipa1P46062 1037 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 CartptP56388 129 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Galnt3P70419 633 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Taf1bP97358 586 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Csn1s2aQ02862 184 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cyp2e1Q05421 493 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ttc39dQ0VF76 604 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ccdc33Q3ULW6 985 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rgl1Q60695 768 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ddx4Q61496 702 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Mapk3Q63844 380 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Fndc3bQ6NWW9 1207 aaKnown RBP9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ece2Q80Z60 881 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rdh13Q8CEE7 334 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Nox1Q8CIZ9 591 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Vps36Q91XD6 386 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rnf144aQ925F3 292 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Prdm5Q9CXE0 599 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Slco6d1Q9D5W6 683 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 AllcQ9JHX6 414 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Dpf1Q9QX66 387 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Adgrb1Q3UHD1 1582 aa9.46□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Pnpla7A2AJ88 1352 aa9.46□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Simc1E9Q6E9 1354 aa9.46□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Usp36B1AQJ2 1098 aaKnown RBP9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gm8225D3Z536 292 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 CflarO35732 481 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 SfnO70456 248 aaKnown RBP9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 AlbP07724 608 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Fabp1P12710 127 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cpa3P15089 417 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Rasgrf1P27671 1262 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 SqleP52019 572 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ccl7Q03366 97 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tmprss11bQ14C59 416 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Stt3bQ3TDQ1 823 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 FaxcQ3UMF9 409 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Nlrp2Q4PLS0 1046 aaKnown RBP9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 PighQ5M9N4 188 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pim2Q62070 370 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Hbs1lQ69ZS7 682 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tpm4Q6IRU2 248 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Krit1Q6S5J6 736 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 InavaQ7TN12 663 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dnajc16Q80TN4 772 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Zbed4Q80WQ9 1168 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Q8BGC1 442 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Zfp189Q8BKP2 608 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Drd5Q8BLD9 478 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Lrrd1Q8C0R9 853 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Slc9a8Q8R4D1 576 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pip4k2cQ91XU3 421 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dnajc3Q91YW3 504 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Coro6Q920M5 471 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ttc5Q99LG4 440 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pdzk1Q9JIL4 519 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Htr6Q9R1C8 440 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ggps1Q9WTN0 300 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Adam17Q9Z0F8 827 aa9.46□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Parp14Q2EMV9 1817 aa9.46□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms