RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Rcsd1Q3UZA1 412 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Parp9Q8CAS9 866 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ifi205aQ8CGE8 404 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Mrfap1Q9CQL7 125 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ccdc88aQ5SNZ0 1873 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Gm6408J3QNG1 320 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pnma2Q8BHK0 365 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tmco1Q921L3 188 aaKnown RBP17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Vmp1Q99KU0 406 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 GabrqQ9JLF1 638 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Mcpt1P11034 246 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Irf5P56477 497 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ddx3xQ62167 662 aaKnown RBP17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ubap1Q8BH48 502 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 RorbQ8R1B8 470 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Exo5Q9CXP9 373 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Mrpl19Q9D338 292 aaKnown RBP17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ifi202Q9R002 445 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Abca17E9PX95 1733 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pabpc1P29341 636 aaKnown RBP17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Shmt1P50431 478 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Zdhhc9P59268 364 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Klra5Q60652 266 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 DcakdQ8BHC4 231 aaKnown RBP17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tbc1d10cQ8C9V1 444 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Smtnl2Q8CI12 456 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pcdha5Q91Y15 934 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tmem2Q5FWI3 1383 aa17.08■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tmem245B1AZA5 876 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Tgm2P21981 686 aaKnown RBP17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Klra9Q2TJJ8 266 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Tbl3Q8C4J7 801 aaKnown RBP17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Olfr474Q8VFC9 310 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 GOLGA7BQ9D428 167 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 EXOC1LB9EK06 172 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Pold2O35654 469 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Oas1aP11928 367 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 ItgadQ3V0T4 1168 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rrm2bQ6PEE3 351 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Oas1gQ8K469 367 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Spata9Q9D9R3 252 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 S100zB9EJL3 99 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Fam83fQ3UKU4 495 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Gm5431Q5NCB3 844 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Susd4Q8BH32 490 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Sorcs3Q8VI51 1219 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 NgrnQ99KS2 293 aaKnown RBP17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Atp5f1Q9CQQ7 256 aaKnown RBP17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 GrapQ9CX99 217 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Echdc3Q9D7J9 300 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Zscan4-ps1A0A1C7CYV3 506 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Zscan4dA7KBS4 506 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 H2-Eb1P04230 264 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Zscan4fQ3URS2 506 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Zscan4cQ80VJ6 506 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Samd4bQ80XS6 687 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Pcmtd2Q8BHD8 359 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Irx5Q9JKQ4 484 aa17.08■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rhbdl2A2AGA4 302 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mindy1Q76LS9 468 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Nsun6Q7TS68 476 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Nim1kQ8BHI9 436 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Itsn1Q9Z0R4 1714 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Arhgef16Q3U5C8 713 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Nox1Q8CIZ9 591 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Scube2Q9JJS0 997 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 XdhQ00519 1335 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Eva1bQ8K2Y3 164 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mettl13Q91YR5 698 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Pde2aQ922S4 916 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ptges3Q9R0Q7 160 aaKnown RBP17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ubr1O70481 1757 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Hpcal1P62748 193 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Tmcc2Q80W04 706 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Tmem161aQ8VCA6 480 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Arih1Q9Z1K5 555 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Prex1Q69ZK0 1650 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 EloblA6PWE0 161 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Nmt1O70310 496 aaKnown RBP17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Cdk7Q03147 346 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Capn13Q3UW68 665 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Thap11Q9JJD0 305 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Dnaja4Q9JMC3 397 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Bloc1s6Q9R0C0 172 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 PrkcdP28867 674 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Tex24Q5DP50 351 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mtmr12Q80TA6 747 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Q8CC96 669 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Q9CXL3 195 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 PrkceP16054 737 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 4933427I04RikQ3V053 235 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Lag3Q61790 521 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Sh3glb2Q8R3V5 400 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Nfkb1P25799 971 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Sstr3P30935 428 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Scrn3Q3TMH2 418 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rasip1Q3U0S6 961 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Klhdc10Q6PAR0 439 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Trim50Q810I2 483 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Pgs1Q8BHF7 553 aa17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms