RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Rdh7O88451 316 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Nr3c1P06537 783 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 CratP47934 626 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Sox30Q8CGW4 782 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Olfr393Q8VGR6 312 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Taf1dQ9D4V4 322 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Tm9sf1Q9DBU0 606 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Tll2Q9WVM6 1012 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Gm8298J3QPI0 401 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Vmn2r1O70410 912 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Eps8Q08509 821 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Mxd4Q60948 209 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Capn11Q6J756 714 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Bfsp2Q6NVD9 416 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Usp20Q8C6M1 916 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Snrnp27Q8K194 155 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Grk1Q9WVL4 564 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Mzf1S4R1L6 814 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Mup6A2AV72 179 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Zfp882E9Q4R4 555 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Gm7942L7N277 499 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Traf2P39429 501 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Olfm4Q3UZZ4 505 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 PygbQ8CI94 843 aaKnown RBP17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 D630039A03RikQ8K0M7 236 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Abtb1Q99LJ2 478 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Fbxo32Q9CPU7 355 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Slc12a4Q9JIS8 1085 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Mapk13Q9Z1B7 366 aa17.13■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Gm28961A0A087WPA5 222 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Gm21858A0A087WQ24 222 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Zfp358E9Q8M1 571 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Mboat4P0C7A3 435 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Oas1aP11928 367 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 HdcP23738 662 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ripk2P58801 539 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Kcnt1Q6ZPR4 1224 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Znf879Q8BI99 563 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 HadhaQ8BMS1 763 aaKnown RBP17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Oas1gQ8K469 367 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 ZwilchQ8R060 589 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Dlgap1Q9D415 992 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Bcl10Q9Z0H7 233 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Oas1eA0A0J9YV76 386 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Erich1E9PY43 332 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rap1gds1E9Q912 607 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Drg1P32233 367 aaKnown RBP17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ccna2P51943 422 aaKnown RBP17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Galnt3P70419 633 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 4930430A15RikQ05AC5 485 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Phactr1Q2M3X8 580 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Arid5aQ3U108 590 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Cspg5Q71M36 566 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Olfr389Q7TRX7 312 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Prkag3Q8BGM7 489 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 FsbpQ8BKE5 299 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Fbxl13Q8CDU4 790 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Utp6Q8VCY6 597 aaKnown RBP17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Mtfr1lQ9CWE0 289 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 CygbQ9CX80 190 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Gpatch1Q9DBM1 930 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Cyp4f14Q9EP75 524 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ppp2r3cQ9JK24 453 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Edf1Q9JMG1 148 aaKnown RBP17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Nwd1A6H603 1563 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Kidins220E9Q9B7 1793 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Trim12cD3Z3L3 497 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Nkx2-3P97334 362 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Fam91a1Q3UVG3 837 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Nell2Q61220 819 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 HpseQ6YGZ1 535 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Sel1l3Q80TS8 1137 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Pan2Q8BGF7 1200 aaKnown RBP17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ttc39bQ8BYY4 617 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Q922M7 232 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Serbp1Q9CY58 407 aaKnown RBP17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Gtf3c6Q9D8P7 227 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rab27aQ9ERI2 221 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Sbno2Q7TNB8 1349 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 1700031M16RikA0A087WSH0 82 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Olfr1123A2AT85 323 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ttc23lA6H6E9 458 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Tbx1P70323 479 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Hnrnph2P70333 449 aaKnown RBP17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 SelpQ01102 768 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Dph1Q5NCQ5 438 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Runx1t1Q61909 577 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Dnali1Q8BVN8 258 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 AopepQ8BXQ6 817 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 NkrfQ8BY02 690 aaKnown RBP17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Nlrp4bQ8C6J9 863 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Mcoln2Q8K595 566 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Tmem82Q8R115 356 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 CpzQ8R4V4 654 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Q8VDP2 222 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ascc2Q91WR3 749 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Pcdha5Q91Y15 934 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Asb7Q91ZU0 318 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Mta3Q924K8 591 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Lztr1Q9CQ33 837 aa17.12■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms