RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Itgb3O54890 787 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Fermt1P59113 677 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Rab6bP61294 208 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Znf746Q3U133 652 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Orai3Q6P8G8 290 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Chsy1Q6ZQ11 800 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Zdhhc17Q80TN5 632 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Fbxw21Q8BI38 468 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Rhpn2Q8BWR8 686 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Lrrc56Q8K375 552 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Oit3Q8R4V5 546 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Itgbl1Q8VDV0 494 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Capn15Q9JLG8 1095 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 PnkpQ9JLV6 522 aaKnown RBP13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Slfn8B1ARD8 910 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Ptpn9O35239 593 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Atp2a2O55143 1044 aaKnown RBP13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Atoh1P48985 351 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Morf4l1P60762 362 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Npas2P97460 816 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Epas1P97481 874 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Q3TQQ9 903 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Spag6Q3V0U9 509 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Mfhas1Q3V1N1 1048 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Serpinb1cQ5SV42 375 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Klhdc10Q6PAR0 439 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Prl3a1Q78Y73 227 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Ccdc50Q810U5 305 aaKnown RBP13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Slc45a1Q8BIV7 751 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Phactr3Q8BYK5 558 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Ero1aQ8R180 464 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Btbd19S4R1I0 287 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 LctF8VPT3 1931 aa13.21□□□□□ -0.29
Rnf4-201ENSMUST00000030992 PtgisO35074 501 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Nrg3O35181 713 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 TktP40142 623 aaKnown RBP13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Hoxb13P70321 286 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ntan1Q64311 310 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tpp2Q64514 1262 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Cdkn3Q810P3 211 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Mettl21cQ8BLU2 248 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Znf76Q8BMU0 568 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Brat1Q8C3R1 822 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Rab44Q8CB87 725 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Mkl1Q8K4J6 964 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Vps37bQ8R0J7 285 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Mgrn1Q9D074 532 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ccdc103Q9D9P2 237 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Copg2Q9QXK3 871 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Noc2lQ9WV70 747 aaKnown RBP13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Myo16Q5DU14 1919 aa13.21□□□□□ -0.3
Rnf4-201ENSMUST00000030992 UtrnE9Q6R7 3430 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gm6205E9PZS2 359 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Vmn2r104E9Q2J5 860 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gm10722F6VLK5 217 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Myl4P09541 193 aaKnown RBP13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 VdrP48281 422 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 GclcP97494 637 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Nsun2Q1HFZ0 757 aaKnown RBP13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gm6367Q8C6L9 287 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tbrg4Q91YM4 630 aaKnown RBP13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tas1r2Q925I4 843 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Polr3cQ9D483 533 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Mettl7bQ9DD20 244 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Fam171a2A2A699 822 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Serpinb9O08797 374 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Adam19O35674 920 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pim1P06803 397 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Akr1b7P21300 316 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 PctpP53808 214 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Zbtb48Q1H9T6 681 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Alkbh5Q3TSG4 395 aaKnown RBP13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Slc38a5Q3U1J0 479 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Mif4gdQ3UBZ5 222 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Smcr8Q3UMB5 935 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 McuQ3UMR5 350 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 RilpQ5ND29 369 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 EfsQ64355 560 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Scube3Q66PY1 993 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ssxb5Q6XAS2 159 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Znf771Q8BJ90 317 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pyhin1Q8BV49 420 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 PreplQ8C167 725 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 HibchQ8QZS1 385 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tceal1Q921P9 165 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Trpm5Q9JJH7 1158 aa13.2□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pold2O35654 469 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Fcer2P20693 331 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 TdgP56581 421 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 SelpQ01102 768 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Mgat3Q10470 538 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ripply1Q2WG77 201 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Znf235Q61116 645 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Hif1aQ61221 836 aaKnown RBP13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Slc26a2Q62273 739 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Arhgap10Q6Y5D8 786 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ip6k2Q80V72 448 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Wasf2Q8BH43 497 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Eif2aQ8BJW6 581 aaKnown RBP13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Hspbap1Q8BK58 483 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms