RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 MYO5BQ9ULV0 1848 aa13.69□□□□□ -0.22
PHGDH-228ENST00000641847 SOS2Q07890 1332 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-228ENST00000641847 ZNF326Q5BKZ1 582 aaKnown RBP13.69□□□□□ -0.22
PHGDH-228ENST00000641847 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
PHGDH-228ENST00000641847 C1orf167Q5SNV9 1468 aa13.67□□□□□ -0.22
PHGDH-228ENST00000641847 ANKRD30BQ9BXX2 1392 aa13.67□□□□□ -0.22
PHGDH-228ENST00000641847 DEFB132Q7Z7B7 95 aa13.65□□□□□ -0.22
PHGDH-228ENST00000641847 ORAI2Q96SN7 254 aa13.65□□□□□ -0.22
PHGDH-228ENST00000641847 METP08581 1390 aa13.65□□□□□ -0.22
PHGDH-228ENST00000641847 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
PHGDH-228ENST00000641847 CLTCL1P53675 1640 aa13.64□□□□□ -0.23
PHGDH-228ENST00000641847 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
PHGDH-228ENST00000641847 BCL9LQ86UU0 1499 aa13.63□□□□□ -0.23
PHGDH-228ENST00000641847 UNC5CLQ8IV45 518 aa13.63□□□□□ -0.23
PHGDH-228ENST00000641847 CCDC144AA2RUR9 1427 aa13.63□□□□□ -0.23
PHGDH-228ENST00000641847 LRPPRCP42704 1394 aaKnown RBP13.61□□□□□ -0.23
PHGDH-228ENST00000641847 BAG6P46379 1132 aa13.61□□□□□ -0.23
PHGDH-228ENST00000641847 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
PHGDH-228ENST00000641847 SIN3AQ96ST3 1273 aa13.61□□□□□ -0.23
PHGDH-228ENST00000641847 LRP5O75197 1615 aa13.6□□□□□ -0.23
PHGDH-228ENST00000641847 MYOM2P54296 1465 aa13.6□□□□□ -0.23
PHGDH-228ENST00000641847 PSDA5PKW4 1024 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-228ENST00000641847 NEUROD1Q13562 356 aa13.59□□□□□ -0.23
PHGDH-228ENST00000641847 LAMC1P11047 1609 aa13.58□□□□□ -0.24
PHGDH-228ENST00000641847 HAP1P54257 671 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-228ENST00000641847 SEPT12Q8IYM1 358 aa13.58□□□□□ -0.24
PHGDH-228ENST00000641847 CCDC9Q9Y3X0 531 aaKnown RBP13.58□□□□□ -0.24
PHGDH-228ENST00000641847 KIF1BO60333 1816 aa13.57□□□□□ -0.24
PHGDH-228ENST00000641847 RALGAPBQ86X10 1494 aa13.57□□□□□ -0.24
PHGDH-228ENST00000641847 KRT27Q7Z3Y8 459 aa13.57□□□□□ -0.24
PHGDH-228ENST00000641847 COL22A1Q8NFW1 1626 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-228ENST00000641847 A0A0G2JS52 829 aa13.56□□□□□ -0.24
PHGDH-228ENST00000641847 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-228ENST00000641847 FOXO3O43524 673 aa13.56□□□□□ -0.24
PHGDH-228ENST00000641847 MYT1Q01538 1121 aa13.56□□□□□ -0.24
PHGDH-228ENST00000641847 NRXN3Q9Y4C0 1643 aa13.56□□□□□ -0.24
PHGDH-228ENST00000641847 NALCNQ8IZF0 1738 aa13.56□□□□□ -0.24
PHGDH-228ENST00000641847 TONSLQ96HA7 1378 aa13.55□□□□□ -0.24
PHGDH-228ENST00000641847 DCAF8L1A6NGE4 600 aa13.54□□□□□ -0.24
PHGDH-228ENST00000641847 YY1P25490 414 aa13.54□□□□□ -0.24
PHGDH-228ENST00000641847 XPCQ01831 940 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-228ENST00000641847 VPS72Q15906 364 aa13.53□□□□□ -0.24
PHGDH-228ENST00000641847 ROBO2Q9HCK4 1378 aa13.53□□□□□ -0.24
PHGDH-228ENST00000641847 SPATA31E1Q6ZUB1 1445 aa13.53□□□□□ -0.24
PHGDH-228ENST00000641847 ZEB1P37275 1124 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-228ENST00000641847 SLIT2O94813 1529 aa13.51□□□□□ -0.25
PHGDH-228ENST00000641847 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-228ENST00000641847 PXDNQ92626 1479 aa13.5□□□□□ -0.25
PHGDH-228ENST00000641847 R3HDM1Q15032 1099 aaKnown RBP13.5□□□□□ -0.25
PHGDH-228ENST00000641847 IFT172Q9UG01 1749 aa13.5□□□□□ -0.25
PHGDH-228ENST00000641847 GLI3P10071 1580 aa13.49□□□□□ -0.25
PHGDH-228ENST00000641847 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.49□□□□□ -0.25
PHGDH-228ENST00000641847 SPATA31A3Q5VYP0 1347 aa13.48□□□□□ -0.25
PHGDH-228ENST00000641847 EN1Q05925 392 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-228ENST00000641847 PSME1Q06323 249 aa13.48□□□□□ -0.25
PHGDH-228ENST00000641847 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
PHGDH-228ENST00000641847 PPLO60437 1756 aa13.48□□□□□ -0.25
PHGDH-228ENST00000641847 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
PHGDH-228ENST00000641847 RGL3Q3MIN7 710 aa13.47□□□□□ -0.25
PHGDH-228ENST00000641847 L3MBTL2Q969R5 705 aa13.47□□□□□ -0.25
PHGDH-228ENST00000641847 PRAG1Q86YV5 1406 aa13.47□□□□□ -0.25
PHGDH-228ENST00000641847 RPGRIP1LQ68CZ1 1315 aa13.46□□□□□ -0.25
PHGDH-228ENST00000641847 NEXMIFQ5QGS0 1516 aa13.46□□□□□ -0.25
PHGDH-228ENST00000641847 NUTM2FA1L443 756 aa13.46□□□□□ -0.25
PHGDH-228ENST00000641847 KRT28Q7Z3Y7 464 aa13.46□□□□□ -0.25
PHGDH-228ENST00000641847 CDC42BPGQ6DT37 1551 aa13.45□□□□□ -0.26
PHGDH-228ENST00000641847 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
PHGDH-228ENST00000641847 FAM98CQ17RN3 349 aaKnown RBP13.44□□□□□ -0.26
PHGDH-228ENST00000641847 LMOD2Q6P5Q4 547 aa13.44□□□□□ -0.26
PHGDH-228ENST00000641847 PPP1R1BQ9UD71 204 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-228ENST00000641847 BRWD3Q6RI45 1802 aa13.42□□□□□ -0.26
PHGDH-228ENST00000641847 DCAF11Q8TEB1 546 aa13.42□□□□□ -0.26
PHGDH-228ENST00000641847 STK26Q9P289 416 aa13.42□□□□□ -0.26
PHGDH-228ENST00000641847 USP32Q8NFA0 1604 aa13.42□□□□□ -0.26
PHGDH-228ENST00000641847 CABLES1Q8TDN4 633 aa13.41□□□□□ -0.26
PHGDH-228ENST00000641847 ARHGEF10O15013 1369 aa13.41□□□□□ -0.26
PHGDH-228ENST00000641847 NBPF8Q3BBV2 869 aa13.4□□□□□ -0.26
PHGDH-228ENST00000641847 NBPF14Q5TI25 921 aa13.4□□□□□ -0.26
PHGDH-228ENST00000641847 TNS3Q68CZ2 1445 aa13.39□□□□□ -0.27
PHGDH-228ENST00000641847 FAM83GA6ND36 823 aa13.39□□□□□ -0.27
PHGDH-228ENST00000641847 WAPLQ7Z5K2 1190 aa13.39□□□□□ -0.27
PHGDH-228ENST00000641847 BTG4Q9NY30 223 aa13.39□□□□□ -0.27
PHGDH-228ENST00000641847 PHF8Q9UPP1 1060 aa13.39□□□□□ -0.27
PHGDH-228ENST00000641847 KDM2AQ9Y2K7 1162 aa13.39□□□□□ -0.27
PHGDH-228ENST00000641847 NRXN1Q9ULB1 1477 aa13.39□□□□□ -0.27
PHGDH-228ENST00000641847 TRPM1Q7Z4N2 1603 aa13.39□□□□□ -0.27
PHGDH-228ENST00000641847 DISP2A7MBM2 1401 aa13.39□□□□□ -0.27
PHGDH-228ENST00000641847 PARD3Q8TEW0 1356 aa13.38□□□□□ -0.27
PHGDH-228ENST00000641847 EZH2Q15910 746 aaKnown RBP13.38□□□□□ -0.27
PHGDH-228ENST00000641847 SBNO1A3KN83 1393 aa13.37□□□□□ -0.27
PHGDH-228ENST00000641847 NWD2Q9ULI1 1742 aa13.37□□□□□ -0.27
PHGDH-228ENST00000641847 FAM196AQ6ZSG2 479 aa13.37□□□□□ -0.27
PHGDH-228ENST00000641847 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
PHGDH-228ENST00000641847 PIK3C2GO75747 1445 aa13.37□□□□□ -0.27
PHGDH-228ENST00000641847 KIAA1210Q9ULL0 1709 aa13.36□□□□□ -0.27
PHGDH-228ENST00000641847 APBA3O96018 575 aa13.36□□□□□ -0.27
PHGDH-228ENST00000641847 FAM182BQ5T319 152 aa13.36□□□□□ -0.27
PHGDH-228ENST00000641847 SPON1Q9HCB6 807 aa13.36□□□□□ -0.27
PHGDH-228ENST00000641847 UTRNP46939 3433 aa13.36□□□□□ -0.27
PHGDH-228ENST00000641847 ADGRF5Q8IZF2 1346 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms