RNA–Protein interactions for RNA: ENST00000641733.1

CASC19-255, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,385 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-255ENST00000641733 TBC1D2Q9BYX2 928 aa10.16□□□□□ -0.78
CASC19-255ENST00000641733 ZNF516Q92618 1163 aa10.15□□□□□ -0.78
CASC19-255ENST00000641733 KCTD17Q8N5Z5 321 aa10.14□□□□□ -0.79
CASC19-255ENST00000641733 SLC27A5Q9Y2P5 690 aa10.14□□□□□ -0.79
CASC19-255ENST00000641733 SALL2Q9Y467 1007 aaPredicted RBP10.14□□□□□ -0.79
CASC19-255ENST00000641733 GJA5P36382 358 aa10.14□□□□□ -0.79
CASC19-255ENST00000641733 FAM117AQ9C073 453 aa10.14□□□□□ -0.79
CASC19-255ENST00000641733 FMNL1O95466 1100 aaPredicted RBP10.13□□□□□ -0.79
CASC19-255ENST00000641733 FDX1P10109 184 aa10.13□□□□□ -0.79
CASC19-255ENST00000641733 MOXD2PA6NHM9 499 aa10.12□□□□□ -0.79
CASC19-255ENST00000641733 A6NJR5 290 aa10.12□□□□□ -0.79
CASC19-255ENST00000641733 ADH1BP00325 375 aa10.12□□□□□ -0.79
CASC19-255ENST00000641733 CCDC82Q8N4S0 544 aa10.12□□□□□ -0.79
CASC19-255ENST00000641733 SPSB2Q99619 263 aa10.11□□□□□ -0.79
CASC19-255ENST00000641733 GGCXP38435 758 aa10.1□□□□□ -0.79
CASC19-255ENST00000641733 MYSM1Q5VVJ2 828 aa10.1□□□□□ -0.79
CASC19-255ENST00000641733 HLA-CQ95604 372 aa10.1□□□□□ -0.79
CASC19-255ENST00000641733 SPTLC1O15269 473 aa10.09□□□□□ -0.79
CASC19-255ENST00000641733 TLL1O43897 1013 aa10.09□□□□□ -0.79
CASC19-255ENST00000641733 RSBN1LQ6PCB5 846 aaPredicted RBP10.09□□□□□ -0.79
CASC19-255ENST00000641733 BRICD5Q6PL45 260 aa10.09□□□□□ -0.79
CASC19-255ENST00000641733 THAP11Q96EK4 314 aa10.09□□□□□ -0.79
CASC19-255ENST00000641733 TRAK2O60296 914 aa10.08□□□□□ -0.8
CASC19-255ENST00000641733 NDUFV2P19404 249 aa10.08□□□□□ -0.8
CASC19-255ENST00000641733 GUCA2AQ02747 115 aa10.08□□□□□ -0.8
CASC19-255ENST00000641733 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
CASC19-255ENST00000641733 RIC3Q7Z5B4 369 aa10.08□□□□□ -0.8
CASC19-255ENST00000641733 A0A0G2JS52 829 aa10.07□□□□□ -0.8
CASC19-255ENST00000641733 PLEKHG3A1L390 1219 aa10.07□□□□□ -0.8
CASC19-255ENST00000641733 NKX2-3Q8TAU0 364 aa10.07□□□□□ -0.8
CASC19-255ENST00000641733 CLK2P49760 499 aaKnown RBP10.06□□□□□ -0.8
CASC19-255ENST00000641733 TUSC1Q2TAM9 212 aa10.06□□□□□ -0.8
CASC19-255ENST00000641733 RNF19BQ6ZMZ0 732 aa10.06□□□□□ -0.8
CASC19-255ENST00000641733 TRAIPQ9BWF2 469 aa10.06□□□□□ -0.8
CASC19-255ENST00000641733 SPDYE5A6NIY4 337 aa10.05□□□□□ -0.8
CASC19-255ENST00000641733 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
CASC19-255ENST00000641733 SKIV2LQ15477 1246 aaKnown RBP10.05□□□□□ -0.8
CASC19-255ENST00000641733 USB1Q9BQ65 265 aaKnown RBP10.05□□□□□ -0.8
CASC19-255ENST00000641733 SLC6A16Q9GZN6 736 aa10.05□□□□□ -0.8
CASC19-255ENST00000641733 GOPCQ9HD26 462 aa10.05□□□□□ -0.8
CASC19-255ENST00000641733 PCDHGC3Q9UN70 934 aa10.05□□□□□ -0.8
CASC19-255ENST00000641733 RAD21O60216 631 aa10.04□□□□□ -0.8
CASC19-255ENST00000641733 MTMR2Q13614 643 aa10.04□□□□□ -0.8
CASC19-255ENST00000641733 MSS51Q4VC12 460 aa10.04□□□□□ -0.8
CASC19-255ENST00000641733 PRPF38BQ5VTL8 546 aaKnown RBP10.04□□□□□ -0.8
CASC19-255ENST00000641733 RETREG3Q86VR2 466 aa10.04□□□□□ -0.8
CASC19-255ENST00000641733 CCDC97Q96F63 343 aaPredicted RBP10.03□□□□□ -0.8
CASC19-255ENST00000641733 ZBTB3Q9H5J0 574 aa10.03□□□□□ -0.8
CASC19-255ENST00000641733 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
CASC19-255ENST00000641733 POLR3EQ9NVU0 708 aa10.03□□□□□ -0.8
CASC19-255ENST00000641733 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.8
CASC19-255ENST00000641733 LIMD1Q9UGP4 676 aa10.02□□□□□ -0.8
CASC19-255ENST00000641733 ATP1B4Q9UN42 357 aaPredicted RBP10.02□□□□□ -0.8
CASC19-255ENST00000641733 S1PR4O95977 384 aa10.01□□□□□ -0.81
CASC19-255ENST00000641733 SERPINA10Q9UK55 444 aa10.01□□□□□ -0.81
CASC19-255ENST00000641733 CSPP1Q1MSJ5 1256 aa10.01□□□□□ -0.81
CASC19-255ENST00000641733 AEBP1Q8IUX7 1158 aa10.01□□□□□ -0.81
CASC19-255ENST00000641733 FAM160A2Q8N612 972 aaPredicted RBP10.01□□□□□ -0.81
CASC19-255ENST00000641733 PCMTD1Q96MG8 357 aaPredicted RBP10.01□□□□□ -0.81
CASC19-255ENST00000641733 PCDHB15Q9Y5E8 787 aa10.01□□□□□ -0.81
CASC19-255ENST00000641733 SYMPKQ92797 1274 aaKnown RBP10□□□□□ -0.81
CASC19-255ENST00000641733 NUTM2BA6NNL0 878 aaPredicted RBP9.99□□□□□ -0.81
CASC19-255ENST00000641733 NUTM2EB1AL46 878 aaPredicted RBP9.99□□□□□ -0.81
CASC19-255ENST00000641733 NUTM2DQ5VT03 806 aaPredicted RBP9.99□□□□□ -0.81
CASC19-255ENST00000641733 NUTM2AQ8IVF1 878 aaPredicted RBP9.99□□□□□ -0.81
CASC19-255ENST00000641733 CLUAP1Q96AJ1 413 aa9.99□□□□□ -0.81
CASC19-255ENST00000641733 TMCO4Q5TGY1 634 aa9.98□□□□□ -0.81
CASC19-255ENST00000641733 ANKLE1Q8NAG6 615 aa9.98□□□□□ -0.81
CASC19-255ENST00000641733 RNF223E7ERA6 249 aa9.97□□□□□ -0.81
CASC19-255ENST00000641733 LILRB3O75022 631 aa9.97□□□□□ -0.81
CASC19-255ENST00000641733 RGS20O76081 388 aa9.97□□□□□ -0.81
CASC19-255ENST00000641733 MMP16P51512 607 aa9.97□□□□□ -0.81
CASC19-255ENST00000641733 PRR7Q8TB68 274 aa9.97□□□□□ -0.81
CASC19-255ENST00000641733 DXOO77932 396 aaKnown RBP9.96□□□□□ -0.82
CASC19-255ENST00000641733 JUNDP17535 347 aa9.96□□□□□ -0.82
CASC19-255ENST00000641733 QPCTQ16769 361 aa9.96□□□□□ -0.82
CASC19-255ENST00000641733 DESI1Q6ICB0 168 aa9.96□□□□□ -0.82
CASC19-255ENST00000641733 CABLES1Q8TDN4 633 aa9.96□□□□□ -0.82
CASC19-255ENST00000641733 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.82
CASC19-255ENST00000641733 PRDM9Q9NQV7 894 aa9.96□□□□□ -0.82
CASC19-255ENST00000641733 PROCA1Q8NCQ7 364 aaPredicted RBP9.94□□□□□ -0.82
CASC19-255ENST00000641733 SHROOM4Q9ULL8 1493 aa9.94□□□□□ -0.82
CASC19-255ENST00000641733 PDE4CQ08493 712 aa9.93□□□□□ -0.82
CASC19-255ENST00000641733 PROSER2Q86WR7 435 aaPredicted RBP9.93□□□□□ -0.82
CASC19-255ENST00000641733 HELBQ8NG08 1087 aaPredicted RBP9.93□□□□□ -0.82
CASC19-255ENST00000641733 FCF1Q9Y324 198 aaKnown RBP9.93□□□□□ -0.82
CASC19-255ENST00000641733 ZNF777Q9ULD5 760 aaPredicted RBP9.92□□□□□ -0.82
CASC19-255ENST00000641733 CFAP99D6REC4 459 aa9.91□□□□□ -0.82
CASC19-255ENST00000641733 PPEF1O14829 653 aaPredicted RBP9.91□□□□□ -0.82
CASC19-255ENST00000641733 PPP2R2DQ66LE6 453 aa9.91□□□□□ -0.82
CASC19-255ENST00000641733 PTPRNQ16849 979 aa9.9□□□□□ -0.82
CASC19-255ENST00000641733 RTL5Q5HYW3 569 aaPredicted RBP9.9□□□□□ -0.82
CASC19-255ENST00000641733 TSC1Q92574 1164 aa9.9□□□□□ -0.82
CASC19-255ENST00000641733 NUDT12Q9BQG2 462 aa9.89□□□□□ -0.83
CASC19-255ENST00000641733 PATL2C9JE40 543 aaKnown RBP9.88□□□□□ -0.83
CASC19-255ENST00000641733 MCM6Q14566 821 aa9.88□□□□□ -0.83
CASC19-255ENST00000641733 RGS22Q8NE09 1264 aa9.88□□□□□ -0.83
CASC19-255ENST00000641733 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
CASC19-255ENST00000641733 ZBTB24O43167 697 aaPredicted RBP9.88□□□□□ -0.83
CASC19-255ENST00000641733 CCNYL3P0C7X3 344 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms