RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 SLC27A5Q9Y2P5 690 aa10.57□□□□□ -0.72
CASC19-248ENST00000641674 CUX2O14529 1486 aa10.56□□□□□ -0.72
CASC19-248ENST00000641674 AVPP01185 164 aa10.56□□□□□ -0.72
CASC19-248ENST00000641674 AXIN1O15169 862 aa10.55□□□□□ -0.72
CASC19-248ENST00000641674 CD2BP2O95400 341 aaKnown RBP10.55□□□□□ -0.72
CASC19-248ENST00000641674 DAXXQ9UER7 740 aaPredicted RBP10.55□□□□□ -0.72
CASC19-248ENST00000641674 ATP6V1AP38606 617 aa10.54□□□□□ -0.72
CASC19-248ENST00000641674 PEG3Q9GZU2 1588 aa10.54□□□□□ -0.72
CASC19-248ENST00000641674 C11orf95C9JLR9 678 aaPredicted RBP10.53□□□□□ -0.72
CASC19-248ENST00000641674 FMNL1O95466 1100 aaPredicted RBP10.53□□□□□ -0.72
CASC19-248ENST00000641674 MROH2BQ7Z745 1585 aa10.52□□□□□ -0.73
CASC19-248ENST00000641674 WFS1O76024 890 aa10.52□□□□□ -0.73
CASC19-248ENST00000641674 RNF19BQ6ZMZ0 732 aa10.52□□□□□ -0.73
CASC19-248ENST00000641674 P3H3Q8IVL6 736 aa10.52□□□□□ -0.73
CASC19-248ENST00000641674 PHOX2BQ99453 314 aa10.52□□□□□ -0.73
CASC19-248ENST00000641674 GNPATO15228 680 aa10.51□□□□□ -0.73
CASC19-248ENST00000641674 GPR37O15354 613 aa10.51□□□□□ -0.73
CASC19-248ENST00000641674 GCGRP47871 477 aa10.51□□□□□ -0.73
CASC19-248ENST00000641674 BRICD5Q6PL45 260 aa10.51□□□□□ -0.73
CASC19-248ENST00000641674 NESP48681 1621 aa10.51□□□□□ -0.73
CASC19-248ENST00000641674 TTC24A2A3L6 582 aaPredicted RBP10.5□□□□□ -0.73
CASC19-248ENST00000641674 CTC1Q2NKJ3 1217 aa10.49□□□□□ -0.73
CASC19-248ENST00000641674 LAMC3Q9Y6N6 1575 aa10.49□□□□□ -0.73
CASC19-248ENST00000641674 TESPA1A2RU30 521 aaPredicted RBP10.48□□□□□ -0.73
CASC19-248ENST00000641674 SMCPP49901 116 aaPredicted RBP10.48□□□□□ -0.73
CASC19-248ENST00000641674 NFX1Q12986 1120 aaKnown RBP10.48□□□□□ -0.73
CASC19-248ENST00000641674 ZBTB24O43167 697 aaPredicted RBP10.47□□□□□ -0.73
CASC19-248ENST00000641674 SMPD1P17405 629 aa10.46□□□□□ -0.74
CASC19-248ENST00000641674 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.74
CASC19-248ENST00000641674 LCE2CQ5TA81 110 aa10.45□□□□□ -0.74
CASC19-248ENST00000641674 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
CASC19-248ENST00000641674 SNRPBP14678 240 aaKnown RBP10.44□□□□□ -0.74
CASC19-248ENST00000641674 MSS51Q4VC12 460 aa10.44□□□□□ -0.74
CASC19-248ENST00000641674 J3QL48 77 aa10.43□□□□□ -0.74
CASC19-248ENST00000641674 WNT7AO00755 349 aa10.43□□□□□ -0.74
CASC19-248ENST00000641674 SULF1Q8IWU6 871 aa10.43□□□□□ -0.74
CASC19-248ENST00000641674 MRGPRX2Q96LB1 330 aa10.43□□□□□ -0.74
CASC19-248ENST00000641674 ATP13A2Q9NQ11 1180 aa10.43□□□□□ -0.74
CASC19-248ENST00000641674 TRIM32Q13049 653 aa10.42□□□□□ -0.74
CASC19-248ENST00000641674 SNIP1Q8TAD8 396 aaKnown RBP10.42□□□□□ -0.74
CASC19-248ENST00000641674 WIZO95785 1651 aa10.41□□□□□ -0.74
CASC19-248ENST00000641674 CADPSQ9ULU8 1353 aa10.4□□□□□ -0.74
CASC19-248ENST00000641674 KIF21AQ7Z4S6 1674 aa10.4□□□□□ -0.75
CASC19-248ENST00000641674 WIPF1O43516 503 aa10.39□□□□□ -0.75
CASC19-248ENST00000641674 SMYD5Q6GMV2 418 aa10.39□□□□□ -0.75
CASC19-248ENST00000641674 HPS1Q92902 700 aa10.39□□□□□ -0.75
CASC19-248ENST00000641674 MMP16P51512 607 aa10.38□□□□□ -0.75
CASC19-248ENST00000641674 THOC2Q8NI27 1593 aaKnown RBP10.37□□□□□ -0.75
CASC19-248ENST00000641674 HLA-CQ95604 372 aa10.37□□□□□ -0.75
CASC19-248ENST00000641674 STK17AQ9UEE5 414 aa10.37□□□□□ -0.75
CASC19-248ENST00000641674 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
CASC19-248ENST00000641674 TRIM47Q96LD4 638 aa10.36□□□□□ -0.75
CASC19-248ENST00000641674 TERTO14746 1132 aaKnown RBP10.35□□□□□ -0.75
CASC19-248ENST00000641674 Q3C1V9 767 aa10.35□□□□□ -0.75
CASC19-248ENST00000641674 DXOO77932 396 aaKnown RBP10.34□□□□□ -0.75
CASC19-248ENST00000641674 SKOR1P84550 965 aa10.34□□□□□ -0.75
CASC19-248ENST00000641674 CCDC24Q8N4L8 307 aa10.34□□□□□ -0.75
CASC19-248ENST00000641674 USB1Q9BQ65 265 aaKnown RBP10.34□□□□□ -0.75
CASC19-248ENST00000641674 CD46P15529 392 aa10.33□□□□□ -0.76
CASC19-248ENST00000641674 INSM1Q01101 510 aaPredicted RBP10.33□□□□□ -0.76
CASC19-248ENST00000641674 RSF1Q96T23 1441 aaPredicted RBP10.32□□□□□ -0.76
CASC19-248ENST00000641674 RC3H1Q5TC82 1133 aaKnown RBP10.31□□□□□ -0.76
CASC19-248ENST00000641674 GPIHBP1Q8IV16 184 aa10.31□□□□□ -0.76
CASC19-248ENST00000641674 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
CASC19-248ENST00000641674 MRC2Q9UBG0 1479 aa10.31□□□□□ -0.76
CASC19-248ENST00000641674 KDM4AO75164 1064 aa10.3□□□□□ -0.76
CASC19-248ENST00000641674 CEP164Q9UPV0 1460 aa10.29□□□□□ -0.76
CASC19-248ENST00000641674 GUCA2AQ02747 115 aa10.28□□□□□ -0.76
CASC19-248ENST00000641674 REPIN1Q9BWE0 567 aaKnown RBP10.28□□□□□ -0.76
CASC19-248ENST00000641674 TOP2AP11388 1531 aaKnown RBP10.27□□□□□ -0.77
CASC19-248ENST00000641674 FANCD2Q9BXW9 1451 aa10.27□□□□□ -0.77
CASC19-248ENST00000641674 ALDH1A1P00352 501 aa10.26□□□□□ -0.77
CASC19-248ENST00000641674 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
CASC19-248ENST00000641674 CFTRP13569 1480 aa10.26□□□□□ -0.77
CASC19-248ENST00000641674 WDR62O43379 1518 aa10.26□□□□□ -0.77
CASC19-248ENST00000641674 MDM2Q00987 491 aaPredicted RBP10.26□□□□□ -0.77
CASC19-248ENST00000641674 WNT7BP56706 349 aa10.25□□□□□ -0.77
CASC19-248ENST00000641674 KIFC2Q96AC6 838 aa10.25□□□□□ -0.77
CASC19-248ENST00000641674 HOXA2O43364 376 aa10.24□□□□□ -0.77
CASC19-248ENST00000641674 BMP1P13497 986 aa10.24□□□□□ -0.77
CASC19-248ENST00000641674 PTCRAQ6ISU1 281 aaPredicted RBP10.23□□□□□ -0.77
CASC19-248ENST00000641674 JUNDP17535 347 aa10.21□□□□□ -0.78
CASC19-248ENST00000641674 MAP2K5Q13163 448 aa10.21□□□□□ -0.78
CASC19-248ENST00000641674 TRIM46Q7Z4K8 759 aa10.21□□□□□ -0.78
CASC19-248ENST00000641674 SIAH2O43255 324 aa10.2□□□□□ -0.78
CASC19-248ENST00000641674 VEGFBP49765 207 aa10.2□□□□□ -0.78
CASC19-248ENST00000641674 USP46P62068 366 aa10.2□□□□□ -0.78
CASC19-248ENST00000641674 PRDM2Q13029 1718 aa10.2□□□□□ -0.78
CASC19-248ENST00000641674 GMPRP36959 345 aa10.19□□□□□ -0.78
CASC19-248ENST00000641674 NXF1Q9UBU9 619 aaKnown RBP10.19□□□□□ -0.78
CASC19-248ENST00000641674 IRF6O14896 467 aa10.18□□□□□ -0.78
CASC19-248ENST00000641674 EHBP1Q8NDI1 1231 aa10.18□□□□□ -0.78
CASC19-248ENST00000641674 LORP23490 312 aaPredicted RBP10.17□□□□□ -0.78
CASC19-248ENST00000641674 SLC16A10Q8TF71 515 aa10.17□□□□□ -0.78
CASC19-248ENST00000641674 NUDT12Q9BQG2 462 aa10.17□□□□□ -0.78
CASC19-248ENST00000641674 CCDC88BA6NC98 1476 aa10.17□□□□□ -0.78
CASC19-248ENST00000641674 CAPN5O15484 640 aaPredicted RBP10.16□□□□□ -0.78
CASC19-248ENST00000641674 WASF2Q9Y6W5 498 aa10.15□□□□□ -0.78
CASC19-248ENST00000641674 URB2Q14146 1524 aaKnown RBP10.15□□□□□ -0.78
CASC19-248ENST00000641674 SH3BP2P78314 561 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms