RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 SLC27A5Q9Y2P5 690 aa10.57□□□□□ -0.72
CASC19-248ENST00000641674 CUX2O14529 1486 aa10.56□□□□□ -0.72
CASC19-248ENST00000641674 AVPP01185 164 aa10.56□□□□□ -0.72
CASC19-248ENST00000641674 AXIN1O15169 862 aa10.55□□□□□ -0.72
CASC19-248ENST00000641674 CD2BP2O95400 341 aaKnown RBP10.55□□□□□ -0.72
CASC19-248ENST00000641674 DAXXQ9UER7 740 aaPredicted RBP10.55□□□□□ -0.72
CASC19-248ENST00000641674 ATP6V1AP38606 617 aa10.54□□□□□ -0.72
CASC19-248ENST00000641674 PEG3Q9GZU2 1588 aa10.54□□□□□ -0.72
CASC19-248ENST00000641674 C11orf95C9JLR9 678 aaPredicted RBP10.53□□□□□ -0.72
CASC19-248ENST00000641674 FMNL1O95466 1100 aaPredicted RBP10.53□□□□□ -0.72
CASC19-248ENST00000641674 MROH2BQ7Z745 1585 aa10.52□□□□□ -0.73
CASC19-248ENST00000641674 WFS1O76024 890 aa10.52□□□□□ -0.73
CASC19-248ENST00000641674 RNF19BQ6ZMZ0 732 aa10.52□□□□□ -0.73
CASC19-248ENST00000641674 P3H3Q8IVL6 736 aa10.52□□□□□ -0.73
CASC19-248ENST00000641674 PHOX2BQ99453 314 aa10.52□□□□□ -0.73
CASC19-248ENST00000641674 GNPATO15228 680 aa10.51□□□□□ -0.73
CASC19-248ENST00000641674 GPR37O15354 613 aa10.51□□□□□ -0.73
CASC19-248ENST00000641674 GCGRP47871 477 aa10.51□□□□□ -0.73
CASC19-248ENST00000641674 BRICD5Q6PL45 260 aa10.51□□□□□ -0.73
CASC19-248ENST00000641674 NESP48681 1621 aa10.51□□□□□ -0.73
CASC19-248ENST00000641674 TTC24A2A3L6 582 aaPredicted RBP10.5□□□□□ -0.73
CASC19-248ENST00000641674 CTC1Q2NKJ3 1217 aa10.49□□□□□ -0.73
CASC19-248ENST00000641674 LAMC3Q9Y6N6 1575 aa10.49□□□□□ -0.73
CASC19-248ENST00000641674 TESPA1A2RU30 521 aaPredicted RBP10.48□□□□□ -0.73
CASC19-248ENST00000641674 SMCPP49901 116 aaPredicted RBP10.48□□□□□ -0.73
CASC19-248ENST00000641674 NFX1Q12986 1120 aaKnown RBP10.48□□□□□ -0.73
CASC19-248ENST00000641674 ZBTB24O43167 697 aaPredicted RBP10.47□□□□□ -0.73
CASC19-248ENST00000641674 SMPD1P17405 629 aa10.46□□□□□ -0.74
CASC19-248ENST00000641674 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.74
CASC19-248ENST00000641674 LCE2CQ5TA81 110 aa10.45□□□□□ -0.74
CASC19-248ENST00000641674 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
CASC19-248ENST00000641674 SNRPBP14678 240 aaKnown RBP10.44□□□□□ -0.74
CASC19-248ENST00000641674 MSS51Q4VC12 460 aa10.44□□□□□ -0.74
CASC19-248ENST00000641674 J3QL48 77 aa10.43□□□□□ -0.74
CASC19-248ENST00000641674 WNT7AO00755 349 aa10.43□□□□□ -0.74
CASC19-248ENST00000641674 SULF1Q8IWU6 871 aa10.43□□□□□ -0.74
CASC19-248ENST00000641674 MRGPRX2Q96LB1 330 aa10.43□□□□□ -0.74
CASC19-248ENST00000641674 ATP13A2Q9NQ11 1180 aa10.43□□□□□ -0.74
CASC19-248ENST00000641674 TRIM32Q13049 653 aa10.42□□□□□ -0.74
CASC19-248ENST00000641674 SNIP1Q8TAD8 396 aaKnown RBP10.42□□□□□ -0.74
CASC19-248ENST00000641674 WIZO95785 1651 aa10.41□□□□□ -0.74
CASC19-248ENST00000641674 CADPSQ9ULU8 1353 aa10.4□□□□□ -0.74
CASC19-248ENST00000641674 KIF21AQ7Z4S6 1674 aa10.4□□□□□ -0.75
CASC19-248ENST00000641674 WIPF1O43516 503 aa10.39□□□□□ -0.75
CASC19-248ENST00000641674 SMYD5Q6GMV2 418 aa10.39□□□□□ -0.75
CASC19-248ENST00000641674 HPS1Q92902 700 aa10.39□□□□□ -0.75
CASC19-248ENST00000641674 MMP16P51512 607 aa10.38□□□□□ -0.75
CASC19-248ENST00000641674 THOC2Q8NI27 1593 aaKnown RBP10.37□□□□□ -0.75
CASC19-248ENST00000641674 HLA-CQ95604 372 aa10.37□□□□□ -0.75
CASC19-248ENST00000641674 STK17AQ9UEE5 414 aa10.37□□□□□ -0.75
CASC19-248ENST00000641674 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
CASC19-248ENST00000641674 TRIM47Q96LD4 638 aa10.36□□□□□ -0.75
CASC19-248ENST00000641674 TERTO14746 1132 aaKnown RBP10.35□□□□□ -0.75
CASC19-248ENST00000641674 Q3C1V9 767 aa10.35□□□□□ -0.75
CASC19-248ENST00000641674 DXOO77932 396 aaKnown RBP10.34□□□□□ -0.75
CASC19-248ENST00000641674 SKOR1P84550 965 aa10.34□□□□□ -0.75
CASC19-248ENST00000641674 CCDC24Q8N4L8 307 aa10.34□□□□□ -0.75
CASC19-248ENST00000641674 USB1Q9BQ65 265 aaKnown RBP10.34□□□□□ -0.75
CASC19-248ENST00000641674 CD46P15529 392 aa10.33□□□□□ -0.76
CASC19-248ENST00000641674 INSM1Q01101 510 aaPredicted RBP10.33□□□□□ -0.76
CASC19-248ENST00000641674 RSF1Q96T23 1441 aaPredicted RBP10.32□□□□□ -0.76
CASC19-248ENST00000641674 RC3H1Q5TC82 1133 aaKnown RBP10.31□□□□□ -0.76
CASC19-248ENST00000641674 GPIHBP1Q8IV16 184 aa10.31□□□□□ -0.76
CASC19-248ENST00000641674 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
CASC19-248ENST00000641674 MRC2Q9UBG0 1479 aa10.31□□□□□ -0.76
CASC19-248ENST00000641674 KDM4AO75164 1064 aa10.3□□□□□ -0.76
CASC19-248ENST00000641674 CEP164Q9UPV0 1460 aa10.29□□□□□ -0.76
CASC19-248ENST00000641674 GUCA2AQ02747 115 aa10.28□□□□□ -0.76
CASC19-248ENST00000641674 REPIN1Q9BWE0 567 aaKnown RBP10.28□□□□□ -0.76
CASC19-248ENST00000641674 TOP2AP11388 1531 aaKnown RBP10.27□□□□□ -0.77
CASC19-248ENST00000641674 FANCD2Q9BXW9 1451 aa10.27□□□□□ -0.77
CASC19-248ENST00000641674 ALDH1A1P00352 501 aa10.26□□□□□ -0.77
CASC19-248ENST00000641674 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
CASC19-248ENST00000641674 CFTRP13569 1480 aa10.26□□□□□ -0.77
CASC19-248ENST00000641674 WDR62O43379 1518 aa10.26□□□□□ -0.77
CASC19-248ENST00000641674 MDM2Q00987 491 aaPredicted RBP10.26□□□□□ -0.77
CASC19-248ENST00000641674 WNT7BP56706 349 aa10.25□□□□□ -0.77
CASC19-248ENST00000641674 KIFC2Q96AC6 838 aa10.25□□□□□ -0.77
CASC19-248ENST00000641674 HOXA2O43364 376 aa10.24□□□□□ -0.77
CASC19-248ENST00000641674 BMP1P13497 986 aa10.24□□□□□ -0.77
CASC19-248ENST00000641674 PTCRAQ6ISU1 281 aaPredicted RBP10.23□□□□□ -0.77
CASC19-248ENST00000641674 JUNDP17535 347 aa10.21□□□□□ -0.78
CASC19-248ENST00000641674 MAP2K5Q13163 448 aa10.21□□□□□ -0.78
CASC19-248ENST00000641674 TRIM46Q7Z4K8 759 aa10.21□□□□□ -0.78
CASC19-248ENST00000641674 SIAH2O43255 324 aa10.2□□□□□ -0.78
CASC19-248ENST00000641674 VEGFBP49765 207 aa10.2□□□□□ -0.78
CASC19-248ENST00000641674 USP46P62068 366 aa10.2□□□□□ -0.78
CASC19-248ENST00000641674 PRDM2Q13029 1718 aa10.2□□□□□ -0.78
CASC19-248ENST00000641674 GMPRP36959 345 aa10.19□□□□□ -0.78
CASC19-248ENST00000641674 NXF1Q9UBU9 619 aaKnown RBP10.19□□□□□ -0.78
CASC19-248ENST00000641674 IRF6O14896 467 aa10.18□□□□□ -0.78
CASC19-248ENST00000641674 EHBP1Q8NDI1 1231 aa10.18□□□□□ -0.78
CASC19-248ENST00000641674 LORP23490 312 aaPredicted RBP10.17□□□□□ -0.78
CASC19-248ENST00000641674 SLC16A10Q8TF71 515 aa10.17□□□□□ -0.78
CASC19-248ENST00000641674 NUDT12Q9BQG2 462 aa10.17□□□□□ -0.78
CASC19-248ENST00000641674 CCDC88BA6NC98 1476 aa10.17□□□□□ -0.78
CASC19-248ENST00000641674 CAPN5O15484 640 aaPredicted RBP10.16□□□□□ -0.78
CASC19-248ENST00000641674 WASF2Q9Y6W5 498 aa10.15□□□□□ -0.78
CASC19-248ENST00000641674 URB2Q14146 1524 aaKnown RBP10.15□□□□□ -0.78
CASC19-248ENST00000641674 SH3BP2P78314 561 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms