RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
PHGDH-218ENST00000641491 TMF1P82094 1093 aa18.07■□□□□ 0.48
PHGDH-218ENST00000641491 CDCA8Q53HL2 280 aa18.07■□□□□ 0.48
PHGDH-218ENST00000641491 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
PHGDH-218ENST00000641491 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
PHGDH-218ENST00000641491 PTPRUQ92729 1446 aa18.06■□□□□ 0.48
PHGDH-218ENST00000641491 STRCP1A6NGW2 1772 aa18.05■□□□□ 0.48
PHGDH-218ENST00000641491 POLR3GLQ9BT43 218 aa18.05■□□□□ 0.48
PHGDH-218ENST00000641491 ROBO2Q9HCK4 1378 aa18.04■□□□□ 0.48
PHGDH-218ENST00000641491 MINK1Q8N4C8 1332 aaPredicted RBP18.04■□□□□ 0.48
PHGDH-218ENST00000641491 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
PHGDH-218ENST00000641491 POTEAQ6S8J7 498 aa18.04■□□□□ 0.48
PHGDH-218ENST00000641491 WAPLQ7Z5K2 1190 aa18.04■□□□□ 0.48
PHGDH-218ENST00000641491 NWD1Q149M9 1564 aa18.04■□□□□ 0.48
PHGDH-218ENST00000641491 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
PHGDH-218ENST00000641491 XRN1Q8IZH2 1706 aaKnown RBP18.02■□□□□ 0.48
PHGDH-218ENST00000641491 HIRIP3Q9BW71 556 aaPredicted RBP18.02■□□□□ 0.48
PHGDH-218ENST00000641491 SRPK2P78362 688 aaKnown RBP18.01■□□□□ 0.47
PHGDH-218ENST00000641491 MSH6P52701 1360 aa18■□□□□ 0.47
PHGDH-218ENST00000641491 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
PHGDH-218ENST00000641491 CHD2O14647 1828 aaKnown RBP18■□□□□ 0.47
PHGDH-218ENST00000641491 ATF3P18847 181 aa17.99■□□□□ 0.47
PHGDH-218ENST00000641491 TMEM94Q12767 1356 aa17.99■□□□□ 0.47
PHGDH-218ENST00000641491 PLEKHH1Q9ULM0 1364 aa17.98■□□□□ 0.47
PHGDH-218ENST00000641491 SBNO2Q9Y2G9 1366 aa17.98■□□□□ 0.47
PHGDH-218ENST00000641491 NCOA3Q9Y6Q9 1424 aa17.98■□□□□ 0.47
PHGDH-218ENST00000641491 QRICH2Q9H0J4 1663 aa17.97■□□□□ 0.47
PHGDH-218ENST00000641491 ZNF316A6NFI3 1004 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-218ENST00000641491 RBM33Q96EV2 1170 aaKnown RBP17.96■□□□□ 0.47
PHGDH-218ENST00000641491 C19orf44Q9H6X5 657 aa17.95■□□□□ 0.46
PHGDH-218ENST00000641491 ADGRL3Q9HAR2 1447 aa17.95■□□□□ 0.46
PHGDH-218ENST00000641491 WASLO00401 505 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-218ENST00000641491 CADPS2Q86UW7 1296 aa17.94■□□□□ 0.46
PHGDH-218ENST00000641491 CDK19Q9BWU1 502 aa17.93■□□□□ 0.46
PHGDH-218ENST00000641491 ATAD2Q6PL18 1390 aa17.92■□□□□ 0.46
PHGDH-218ENST00000641491 TMC1Q8TDI8 760 aa17.92■□□□□ 0.46
PHGDH-218ENST00000641491 TESK2Q96S53 571 aa17.92■□□□□ 0.46
PHGDH-218ENST00000641491 CABP2Q9NPB3 220 aa17.9■□□□□ 0.46
PHGDH-218ENST00000641491 XIRP1Q702N8 1843 aaKnown RBP17.9■□□□□ 0.46
PHGDH-218ENST00000641491 DCCP43146 1447 aa17.89■□□□□ 0.46
PHGDH-218ENST00000641491 NUTM2FA1L443 756 aa17.89■□□□□ 0.45
PHGDH-218ENST00000641491 ADGRB2O60241 1585 aa17.88■□□□□ 0.45
PHGDH-218ENST00000641491 CDC42BPGQ6DT37 1551 aa17.88■□□□□ 0.45
PHGDH-218ENST00000641491 PUS7Q96PZ0 661 aaKnown RBP17.87■□□□□ 0.45
PHGDH-218ENST00000641491 KIF7Q2M1P5 1343 aa17.86■□□□□ 0.45
PHGDH-218ENST00000641491 NINLQ9Y2I6 1382 aa17.86■□□□□ 0.45
PHGDH-218ENST00000641491 HDGFL2Q7Z4V5 671 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-218ENST00000641491 ANKARQ7Z5J8 1434 aa17.85■□□□□ 0.45
PHGDH-218ENST00000641491 NUDT16Q96DE0 195 aaKnown RBP17.85■□□□□ 0.45
PHGDH-218ENST00000641491 CCDC7Q96M83 1385 aa17.85■□□□□ 0.45
PHGDH-218ENST00000641491 TULP4Q9NRJ4 1543 aa17.85■□□□□ 0.45
PHGDH-218ENST00000641491 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
PHGDH-218ENST00000641491 ESCO1Q5FWF5 840 aa17.84■□□□□ 0.45
PHGDH-218ENST00000641491 TERF2IPQ9NYB0 399 aa17.84■□□□□ 0.45
PHGDH-218ENST00000641491 CCDC61Q9Y6R9 512 aa17.84■□□□□ 0.45
PHGDH-218ENST00000641491 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-218ENST00000641491 NGDNQ8NEJ9 315 aaKnown RBP17.83■□□□□ 0.44
PHGDH-218ENST00000641491 UPF1Q92900 1129 aaKnown RBP eCLIP17.82■□□□□ 0.44
PHGDH-218ENST00000641491 PPIP5K1Q6PFW1 1433 aa17.81■□□□□ 0.44
PHGDH-218ENST00000641491 ROBO1Q9Y6N7 1651 aa17.81■□□□□ 0.44
PHGDH-218ENST00000641491 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
PHGDH-218ENST00000641491 JCADQ9P266 1359 aa17.8■□□□□ 0.44
PHGDH-218ENST00000641491 CABP1Q9NZU7 370 aa17.79■□□□□ 0.44
PHGDH-218ENST00000641491 SLAIN2Q9P270 581 aa17.79■□□□□ 0.44
PHGDH-218ENST00000641491 PHF8Q9UPP1 1060 aa17.79■□□□□ 0.44
PHGDH-218ENST00000641491 ATP7BP35670 1465 aa17.78■□□□□ 0.44
PHGDH-218ENST00000641491 PMFBP1Q8TBY8 1022 aa17.77■□□□□ 0.44
PHGDH-218ENST00000641491 FMN2Q9NZ56 1722 aa17.77■□□□□ 0.44
PHGDH-218ENST00000641491 C1orf167Q5SNV9 1468 aa17.76■□□□□ 0.43
PHGDH-218ENST00000641491 ITSN1Q15811 1721 aa17.76■□□□□ 0.43
PHGDH-218ENST00000641491 MST1RQ04912 1400 aa17.76■□□□□ 0.43
PHGDH-218ENST00000641491 C11orf95C9JLR9 678 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-218ENST00000641491 PSME1Q06323 249 aa17.76■□□□□ 0.43
PHGDH-218ENST00000641491 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
PHGDH-218ENST00000641491 ZNF772Q68DY9 489 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-218ENST00000641491 ZNF692Q9BU19 519 aaPredicted RBP17.75■□□□□ 0.43
PHGDH-218ENST00000641491 KNSTRNQ9Y448 316 aa17.75■□□□□ 0.43
PHGDH-218ENST00000641491 SLC12A5Q9H2X9 1139 aa17.74■□□□□ 0.43
PHGDH-218ENST00000641491 ANKRD36BQ8N2N9 1353 aa17.74■□□□□ 0.43
PHGDH-218ENST00000641491 NPHP3Q7Z494 1330 aa17.73■□□□□ 0.43
PHGDH-218ENST00000641491 PRR36Q9H6K5 1346 aa17.73■□□□□ 0.43
PHGDH-218ENST00000641491 PANK3Q9H999 370 aa17.73■□□□□ 0.43
PHGDH-218ENST00000641491 KTN1Q86UP2 1357 aaKnown RBP17.73■□□□□ 0.43
PHGDH-218ENST00000641491 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
PHGDH-218ENST00000641491 PLEKHG3A1L390 1219 aa17.72■□□□□ 0.43
PHGDH-218ENST00000641491 ACEP12821 1306 aa17.72■□□□□ 0.43
PHGDH-218ENST00000641491 PAK3O75914 559 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-218ENST00000641491 ORAI2Q96SN7 254 aa17.71■□□□□ 0.43
PHGDH-218ENST00000641491 PHLPP1O60346 1717 aa17.71■□□□□ 0.43
PHGDH-218ENST00000641491 KIF1AQ12756 1690 aa17.71■□□□□ 0.42
PHGDH-218ENST00000641491 MEX3CQ5U5Q3 659 aaKnown RBP17.7■□□□□ 0.42
PHGDH-218ENST00000641491 A0A1W2PP64 1363 aa17.69■□□□□ 0.42
PHGDH-218ENST00000641491 FOXO3O43524 673 aa17.69■□□□□ 0.42
PHGDH-218ENST00000641491 RXRBP28702 533 aa17.69■□□□□ 0.42
PHGDH-218ENST00000641491 LMOD2Q6P5Q4 547 aa17.69■□□□□ 0.42
PHGDH-218ENST00000641491 BRINP3Q76B58 766 aa17.69■□□□□ 0.42
PHGDH-218ENST00000641491 CGNL1Q0VF96 1302 aa17.69■□□□□ 0.42
PHGDH-218ENST00000641491 NSD3Q9BZ95 1437 aa17.68■□□□□ 0.42
PHGDH-218ENST00000641491 LRP6O75581 1613 aa17.67■□□□□ 0.42
PHGDH-218ENST00000641491 TOPAZ1Q8N9V7 1692 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms