RNA–Protein interactions for RNA: ENST00000641261.1

LINC02228-202, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-202ENST00000641261 STAG3Q9UJ98 1225 aa17.76■□□□□ 0.43
LINC02228-202ENST00000641261 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
LINC02228-202ENST00000641261 YTHDC2Q9H6S0 1430 aaKnown RBP17.75■□□□□ 0.43
LINC02228-202ENST00000641261 A2ML1A8K2U0 1454 aa17.75■□□□□ 0.43
LINC02228-202ENST00000641261 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
LINC02228-202ENST00000641261 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
LINC02228-202ENST00000641261 ZNF521Q96K83 1311 aa17.74■□□□□ 0.43
LINC02228-202ENST00000641261 ANKRD36BQ8N2N9 1353 aa17.73■□□□□ 0.43
LINC02228-202ENST00000641261 MORC1Q86VD1 984 aa17.72■□□□□ 0.43
LINC02228-202ENST00000641261 PRAM1Q96QH2 718 aa17.72■□□□□ 0.43
LINC02228-202ENST00000641261 SETD1AO15047 1707 aaKnown RBP17.72■□□□□ 0.43
LINC02228-202ENST00000641261 PUS7Q96PZ0 661 aaKnown RBP17.72■□□□□ 0.43
LINC02228-202ENST00000641261 POLR3AO14802 1390 aaPredicted RBP17.71■□□□□ 0.43
LINC02228-202ENST00000641261 CCDC136Q96JN2 1154 aa17.71■□□□□ 0.43
LINC02228-202ENST00000641261 MINK1Q8N4C8 1332 aaPredicted RBP17.71■□□□□ 0.43
LINC02228-202ENST00000641261 CGNL1Q0VF96 1302 aa17.7■□□□□ 0.42
LINC02228-202ENST00000641261 APAF1O14727 1248 aa17.7■□□□□ 0.42
LINC02228-202ENST00000641261 SRPK2P78362 688 aaKnown RBP17.7■□□□□ 0.42
LINC02228-202ENST00000641261 A0A1W2PP64 1363 aa17.69■□□□□ 0.42
LINC02228-202ENST00000641261 EXOC6Q8TAG9 804 aa17.69■□□□□ 0.42
LINC02228-202ENST00000641261 RIMS2Q9UQ26 1411 aa17.69■□□□□ 0.42
LINC02228-202ENST00000641261 DUSP27Q5VZP5 1158 aa17.69■□□□□ 0.42
LINC02228-202ENST00000641261 PLIN1O60240 522 aa17.68■□□□□ 0.42
LINC02228-202ENST00000641261 POGKQ9P215 609 aa17.67■□□□□ 0.42
LINC02228-202ENST00000641261 NRXN3Q9Y4C0 1643 aa17.67■□□□□ 0.42
LINC02228-202ENST00000641261 ZMYM3Q14202 1370 aa17.67■□□□□ 0.42
LINC02228-202ENST00000641261 GOLGA2Q08379 1002 aa17.66■□□□□ 0.42
LINC02228-202ENST00000641261 CD163L1Q9NR16 1453 aa17.65■□□□□ 0.42
LINC02228-202ENST00000641261 SPINK5Q9NQ38 1064 aaPredicted RBP17.65■□□□□ 0.42
LINC02228-202ENST00000641261 ABCC11Q96J66 1382 aa17.65■□□□□ 0.42
LINC02228-202ENST00000641261 MTHFSP49914 203 aa17.64■□□□□ 0.42
LINC02228-202ENST00000641261 ATAD2Q6PL18 1390 aa17.64■□□□□ 0.41
LINC02228-202ENST00000641261 NINLQ9Y2I6 1382 aa17.64■□□□□ 0.41
LINC02228-202ENST00000641261 NSD2O96028 1365 aa17.63■□□□□ 0.41
LINC02228-202ENST00000641261 SLFN5Q08AF3 891 aa17.63■□□□□ 0.41
LINC02228-202ENST00000641261 ESF1Q9H501 851 aaKnown RBP17.63■□□□□ 0.41
LINC02228-202ENST00000641261 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
LINC02228-202ENST00000641261 WAPLQ7Z5K2 1190 aa17.62■□□□□ 0.41
LINC02228-202ENST00000641261 DLC1Q96QB1 1528 aa17.62■□□□□ 0.41
LINC02228-202ENST00000641261 ANKRD26Q9UPS8 1709 aa17.61■□□□□ 0.41
LINC02228-202ENST00000641261 CDK19Q9BWU1 502 aa17.6■□□□□ 0.41
LINC02228-202ENST00000641261 NLRP1Q9C000 1473 aa17.6■□□□□ 0.41
LINC02228-202ENST00000641261 TRMT2AQ8IZ69 625 aaKnown RBP17.6■□□□□ 0.41
LINC02228-202ENST00000641261 GGNBP2Q9H3C7 697 aa17.6■□□□□ 0.41
LINC02228-202ENST00000641261 C20orf194Q5TEA3 1177 aa17.59■□□□□ 0.41
LINC02228-202ENST00000641261 IQSEC2Q5JU85 1478 aa17.59■□□□□ 0.41
LINC02228-202ENST00000641261 UBR1Q8IWV7 1749 aa17.59■□□□□ 0.41
LINC02228-202ENST00000641261 METP08581 1390 aa17.58■□□□□ 0.41
LINC02228-202ENST00000641261 TNRQ92752 1358 aa17.57■□□□□ 0.4
LINC02228-202ENST00000641261 CRBNQ96SW2 442 aa17.57■□□□□ 0.4
LINC02228-202ENST00000641261 NKTRP30414 1462 aaKnown RBP17.57■□□□□ 0.4
LINC02228-202ENST00000641261 KIF20BQ96Q89 1820 aa17.57■□□□□ 0.4
LINC02228-202ENST00000641261 TERF2IPQ9NYB0 399 aa17.57■□□□□ 0.4
LINC02228-202ENST00000641261 CABP1Q9NZU7 370 aa17.57■□□□□ 0.4
LINC02228-202ENST00000641261 FYB1O15117 783 aa17.56■□□□□ 0.4
LINC02228-202ENST00000641261 WWC1Q8IX03 1113 aa17.56■□□□□ 0.4
LINC02228-202ENST00000641261 RRP7AQ9Y3A4 280 aaKnown RBP17.56■□□□□ 0.4
LINC02228-202ENST00000641261 NEUROD2Q15784 382 aa17.55■□□□□ 0.4
LINC02228-202ENST00000641261 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
LINC02228-202ENST00000641261 E9PSI1 815 aa17.54■□□□□ 0.4
LINC02228-202ENST00000641261 RUNDC1Q96C34 613 aa17.54■□□□□ 0.4
LINC02228-202ENST00000641261 TCP11L2Q8N4U5 519 aa17.54■□□□□ 0.4
LINC02228-202ENST00000641261 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.54■□□□□ 0.4
LINC02228-202ENST00000641261 KNDC1Q76NI1 1749 aa17.53■□□□□ 0.4
LINC02228-202ENST00000641261 MED14O60244 1454 aa17.53■□□□□ 0.4
LINC02228-202ENST00000641261 NGEFQ8N5V2 710 aa17.53■□□□□ 0.4
LINC02228-202ENST00000641261 COL3A1P02461 1466 aaPredicted RBP17.53■□□□□ 0.4
LINC02228-202ENST00000641261 HDGFL2Q7Z4V5 671 aaPredicted RBP17.52■□□□□ 0.4
LINC02228-202ENST00000641261 TXNDC2Q86VQ3 553 aa17.52■□□□□ 0.4
LINC02228-202ENST00000641261 TMEM2Q9UHN6 1383 aa17.52■□□□□ 0.39
LINC02228-202ENST00000641261 U2AF1L5P0DN76 240 aaPredicted RBP17.5■□□□□ 0.39
LINC02228-202ENST00000641261 U2AF1Q01081 240 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC02228-202ENST00000641261 ADGRB2O60241 1585 aa17.5■□□□□ 0.39
LINC02228-202ENST00000641261 ATP7BP35670 1465 aa17.5■□□□□ 0.39
LINC02228-202ENST00000641261 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
LINC02228-202ENST00000641261 BCAR3O75815 825 aa17.49■□□□□ 0.39
LINC02228-202ENST00000641261 CEBPAP49715 358 aaPredicted RBP17.49■□□□□ 0.39
LINC02228-202ENST00000641261 CPS1P31327 1500 aa17.49■□□□□ 0.39
LINC02228-202ENST00000641261 FANCIQ9NVI1 1328 aa17.49■□□□□ 0.39
LINC02228-202ENST00000641261 TECPR2O15040 1411 aa17.49■□□□□ 0.39
LINC02228-202ENST00000641261 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.48■□□□□ 0.39
LINC02228-202ENST00000641261 C3P01024 1663 aa17.48■□□□□ 0.39
LINC02228-202ENST00000641261 WASLO00401 505 aaPredicted RBP17.47■□□□□ 0.39
LINC02228-202ENST00000641261 ADAMTS13Q76LX8 1427 aa17.47■□□□□ 0.39
LINC02228-202ENST00000641261 MSH5O43196 834 aa17.47■□□□□ 0.39
LINC02228-202ENST00000641261 PPIP5K1Q6PFW1 1433 aa17.46■□□□□ 0.39
LINC02228-202ENST00000641261 NCKAP5LQ9HCH0 1330 aa17.46■□□□□ 0.39
LINC02228-202ENST00000641261 FAM135BQ49AJ0 1406 aa17.46■□□□□ 0.39
LINC02228-202ENST00000641261 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
LINC02228-202ENST00000641261 FBLN1P23142 703 aa17.46■□□□□ 0.39
LINC02228-202ENST00000641261 MAP2P11137 1827 aaKnown RBP17.46■□□□□ 0.38
LINC02228-202ENST00000641261 LTKP29376 864 aa17.45■□□□□ 0.38
LINC02228-202ENST00000641261 HDGFP51858 240 aaKnown RBP17.45■□□□□ 0.38
LINC02228-202ENST00000641261 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
LINC02228-202ENST00000641261 CPSF1Q10570 1443 aaKnown RBP17.45■□□□□ 0.38
LINC02228-202ENST00000641261 ROBO2Q9HCK4 1378 aa17.45■□□□□ 0.38
LINC02228-202ENST00000641261 FER1L4A9Z1Z3 1794 aa17.44■□□□□ 0.38
LINC02228-202ENST00000641261 CCDC27Q2M243 656 aa17.43■□□□□ 0.38
LINC02228-202ENST00000641261 SKAP1Q86WV1 359 aa17.43■□□□□ 0.38
LINC02228-202ENST00000641261 MON2Q7Z3U7 1717 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms