RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 HNRNPMP52272 730 aaKnown RBP eCLIP6.12□□□□□ -1.43
HNRNPU-230ENST00000640657 UVSSAQ2YD98 709 aa6.12□□□□□ -1.43
HNRNPU-230ENST00000640657 TSPYL1Q9H0U9 437 aa6.12□□□□□ -1.43
HNRNPU-230ENST00000640657 TERF2IPQ9NYB0 399 aa6.12□□□□□ -1.43
HNRNPU-230ENST00000640657 NUP160Q12769 1436 aa6.12□□□□□ -1.43
HNRNPU-230ENST00000640657 ZNF644Q9H582 1327 aaPredicted RBP6.12□□□□□ -1.43
HNRNPU-230ENST00000640657 SMC5Q8IY18 1101 aa6.12□□□□□ -1.43
HNRNPU-230ENST00000640657 TNPO1Q92973 898 aaKnown RBP6.12□□□□□ -1.43
HNRNPU-230ENST00000640657 CHMP4CQ96CF2 233 aa6.12□□□□□ -1.43
HNRNPU-230ENST00000640657 C9orf84Q5VXU9 1444 aa6.12□□□□□ -1.43
HNRNPU-230ENST00000640657 FSD2A1L4K1 749 aa6.11□□□□□ -1.43
HNRNPU-230ENST00000640657 RBM25P49756 843 aaKnown RBP6.11□□□□□ -1.43
HNRNPU-230ENST00000640657 TEX14Q8IWB6 1497 aa6.11□□□□□ -1.43
HNRNPU-230ENST00000640657 NCBP3Q53F19 620 aaKnown RBP6.11□□□□□ -1.43
HNRNPU-230ENST00000640657 TCP11L2Q8N4U5 519 aa6.11□□□□□ -1.43
HNRNPU-230ENST00000640657 RARSP54136 660 aaKnown RBP6.11□□□□□ -1.43
HNRNPU-230ENST00000640657 GPS2Q13227 327 aa6.11□□□□□ -1.43
HNRNPU-230ENST00000640657 HDAC1Q13547 482 aaPredicted RBP6.11□□□□□ -1.43
HNRNPU-230ENST00000640657 WWC1Q8IX03 1113 aa6.11□□□□□ -1.43
HNRNPU-230ENST00000640657 ARID3AQ99856 593 aa6.11□□□□□ -1.43
HNRNPU-230ENST00000640657 HDAC5Q9UQL6 1122 aa6.11□□□□□ -1.43
HNRNPU-230ENST00000640657 TOPBP1Q92547 1522 aa6.11□□□□□ -1.43
HNRNPU-230ENST00000640657 SNAPC4Q5SXM2 1469 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 ATF7IPQ6VMQ6 1270 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 CHD1LQ86WJ1 897 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 PRPF40AO75400 957 aaKnown RBP6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 RNF20Q5VTR2 975 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 LNPKQ9C0E8 428 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 KIF14Q15058 1648 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 ABCA5Q8WWZ7 1642 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 GCC2Q8IWJ2 1684 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 IGHDP01880 384 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 RAB3GAP1Q15042 981 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 BCL2L13Q9BXK5 485 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 RRP7AQ9Y3A4 280 aaKnown RBP6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 ABCC11Q96J66 1382 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 PLEKHH1Q9ULM0 1364 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 PIK3C2GO75747 1445 aa6.1□□□□□ -1.43
HNRNPU-230ENST00000640657 GOLGA6L1Q8N7Z2 621 aa6.09□□□□□ -1.43
HNRNPU-230ENST00000640657 EVC2Q86UK5 1308 aa6.09□□□□□ -1.43
HNRNPU-230ENST00000640657 NPC1L1Q9UHC9 1359 aa6.09□□□□□ -1.43
HNRNPU-230ENST00000640657 BMP2KLQ5H9B9 411 aa6.09□□□□□ -1.43
HNRNPU-230ENST00000640657 CCDC94Q9BW85 323 aaPredicted RBP6.09□□□□□ -1.43
HNRNPU-230ENST00000640657 ARGLU1Q9NWB6 273 aaPredicted RBP6.09□□□□□ -1.43
HNRNPU-230ENST00000640657 ZKSCAN5Q9Y2L8 839 aa6.09□□□□□ -1.43
HNRNPU-230ENST00000640657 CCDC141Q6ZP82 1450 aa6.09□□□□□ -1.43
HNRNPU-230ENST00000640657 GNAI1P63096 354 aa6.09□□□□□ -1.43
HNRNPU-230ENST00000640657 PPP1R9BQ96SB3 815 aa6.09□□□□□ -1.43
HNRNPU-230ENST00000640657 STAG3Q9UJ98 1225 aa6.09□□□□□ -1.43
HNRNPU-230ENST00000640657 WDR33Q9C0J8 1336 aaKnown RBP6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 KIF20AO95235 890 aa6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 CCDC27Q2M243 656 aa6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 NBPF1Q3BBV0 1214 aa6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 ALDH1L2Q3SY69 923 aa6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 CWC15Q9P013 229 aaKnown RBP6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 GOLGA6L19H0YKK7 550 aa6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 KCNJ4P48050 445 aa6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 NOL7Q9UMY1 257 aaKnown RBP6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 BAG4O95429 457 aaKnown RBP6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 NOM1Q5C9Z4 860 aaKnown RBP6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 PANK2Q9BZ23 570 aa6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.08□□□□□ -1.44
HNRNPU-230ENST00000640657 NESP48681 1621 aa6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 PER1O15534 1290 aaPredicted RBP6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 SRPK2P78362 688 aaKnown RBP6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 IL16Q14005 1332 aa6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 CTTNBP2Q8WZ74 1663 aa6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 CCP110O43303 1012 aa6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 ZNF445P59923 1031 aa6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 LRSAM1Q6UWE0 723 aa6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 GPATCH3Q96I76 525 aa6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 A0A0U1RQG5 324 aaPredicted RBP6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 KIF2AO00139 706 aaPredicted RBP6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 RIPK4P57078 832 aa6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 KLHL34Q8N239 644 aa6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 RUFY2Q8WXA3 655 aa6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 CGNQ9P2M7 1197 aaKnown RBP6.07□□□□□ -1.44
HNRNPU-230ENST00000640657 EIF2AK4Q9P2K8 1649 aaKnown RBP6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 ZNF500O60304 480 aaPredicted RBP6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 DIAPH1O60610 1272 aaKnown RBP6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 IQGAP2Q13576 1575 aa6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 SKAP1Q86WV1 359 aa6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 JPH4Q96JJ6 628 aa6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 CALCOCO1Q9P1Z2 691 aa6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 SPAG9O60271 1321 aaKnown RBP6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 ERC2O15083 957 aa6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 ASXL1Q8IXJ9 1541 aa6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 IBTKQ9P2D0 1353 aaPredicted RBP6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 TRIM6-TRIM34B2RNG4 842 aa6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 EXOSC9Q06265 439 aaKnown RBP6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 UTP14CQ5TAP6 766 aaKnown RBP6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 FEZ1Q99689 392 aa6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 NOB1Q9ULX3 412 aaKnown RBP6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 PRAG1Q86YV5 1406 aa6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 CCDC192P0DO97 292 aa6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 CCDC112Q8NEF3 446 aa6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 SMC3Q9UQE7 1217 aa6.06□□□□□ -1.44
HNRNPU-230ENST00000640657 NPM1P06748 294 aaKnown RBP eCLIP6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 XPCQ01831 940 aaPredicted RBP6.05□□□□□ -1.44
HNRNPU-230ENST00000640657 ZSCAN23Q3MJ62 389 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms