RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 NCOA3Q9Y6Q9 1424 aa30.39■■■□□ 2.46
TSPAN9-208ENST00000640568 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.38■■■□□ 2.45
TSPAN9-208ENST00000640568 ADGRL3Q9HAR2 1447 aa30.35■■■□□ 2.45
TSPAN9-208ENST00000640568 ST20-MTHFSA0A0A6YYL1 179 aa30.34■■■□□ 2.45
TSPAN9-208ENST00000640568 MSH6P52701 1360 aa30.34■■■□□ 2.45
TSPAN9-208ENST00000640568 MINK1Q8N4C8 1332 aaPredicted RBP30.34■■■□□ 2.45
TSPAN9-208ENST00000640568 ADGRB2O60241 1585 aa30.3■■■□□ 2.44
TSPAN9-208ENST00000640568 HSPA5P11021 654 aaKnown RBP30.3■■■□□ 2.44
TSPAN9-208ENST00000640568 HIRIP3Q9BW71 556 aaPredicted RBP30.3■■■□□ 2.44
TSPAN9-208ENST00000640568 C19orf44Q9H6X5 657 aa30.29■■■□□ 2.44
TSPAN9-208ENST00000640568 CDC42BPGQ6DT37 1551 aa30.27■■■□□ 2.44
TSPAN9-208ENST00000640568 IQSEC2Q5JU85 1478 aa30.27■■■□□ 2.44
TSPAN9-208ENST00000640568 SBNO2Q9Y2G9 1366 aa30.27■■■□□ 2.44
TSPAN9-208ENST00000640568 CERKQ8TCT0 537 aa30.26■■■□□ 2.44
TSPAN9-208ENST00000640568 SLC24A1O60721 1099 aa30.25■■■□□ 2.43
TSPAN9-208ENST00000640568 ATF3P18847 181 aa30.25■■■□□ 2.43
TSPAN9-208ENST00000640568 DCCP43146 1447 aa30.24■■■□□ 2.43
TSPAN9-208ENST00000640568 FMN2Q9NZ56 1722 aa30.21■■■□□ 2.43
TSPAN9-208ENST00000640568 CADPS2Q86UW7 1296 aa30.21■■■□□ 2.43
TSPAN9-208ENST00000640568 EVC2Q86UK5 1308 aa30.21■■■□□ 2.43
TSPAN9-208ENST00000640568 WASLO00401 505 aaPredicted RBP30.19■■■□□ 2.42
TSPAN9-208ENST00000640568 TESK2Q96S53 571 aa30.19■■■□□ 2.42
TSPAN9-208ENST00000640568 TULP4Q9NRJ4 1543 aa30.19■■■□□ 2.42
TSPAN9-208ENST00000640568 TMF1P82094 1093 aa30.19■■■□□ 2.42
TSPAN9-208ENST00000640568 SRPK2P78362 688 aaKnown RBP30.17■■■□□ 2.42
TSPAN9-208ENST00000640568 CDK19Q9BWU1 502 aa30.17■■■□□ 2.42
TSPAN9-208ENST00000640568 NUTM2FA1L443 756 aa30.13■■■□□ 2.41
TSPAN9-208ENST00000640568 RGPD8O14715 1765 aaPredicted RBP30.13■■■□□ 2.41
TSPAN9-208ENST00000640568 ITSN1Q15811 1721 aa30.12■■■□□ 2.41
TSPAN9-208ENST00000640568 TOM1O60784 492 aa30.12■■■□□ 2.41
TSPAN9-208ENST00000640568 CDCA8Q53HL2 280 aa30.11■■■□□ 2.41
TSPAN9-208ENST00000640568 CABP2Q9NPB3 220 aa30.11■■■□□ 2.41
TSPAN9-208ENST00000640568 MST1RQ04912 1400 aa30.1■■■□□ 2.41
TSPAN9-208ENST00000640568 DISP3Q9P2K9 1392 aa30.1■■■□□ 2.41
TSPAN9-208ENST00000640568 ANKARQ7Z5J8 1434 aa30.09■■■□□ 2.41
TSPAN9-208ENST00000640568 USP32Q8NFA0 1604 aa30.09■■■□□ 2.41
TSPAN9-208ENST00000640568 UBAP1LF5GYI3 381 aa30.08■■■□□ 2.41
TSPAN9-208ENST00000640568 C1orf167Q5SNV9 1468 aa30.07■■■□□ 2.4
TSPAN9-208ENST00000640568 SLAIN2Q9P270 581 aa30.06■■■□□ 2.4
TSPAN9-208ENST00000640568 ATP7BP35670 1465 aa30.06■■■□□ 2.4
TSPAN9-208ENST00000640568 NUDT16Q96DE0 195 aaKnown RBP30.06■■■□□ 2.4
TSPAN9-208ENST00000640568 ATAD2Q6PL18 1390 aa30.05■■■□□ 2.4
TSPAN9-208ENST00000640568 POLR3GLQ9BT43 218 aa30.05■■■□□ 2.4
TSPAN9-208ENST00000640568 TOPAZ1Q8N9V7 1692 aa30.03■■■□□ 2.4
TSPAN9-208ENST00000640568 ESCO1Q5FWF5 840 aa30.02■■■□□ 2.4
TSPAN9-208ENST00000640568 PUS7Q96PZ0 661 aaKnown RBP30.02■■■□□ 2.4
TSPAN9-208ENST00000640568 PRR36Q9H6K5 1346 aa30.02■■■□□ 2.4
TSPAN9-208ENST00000640568 CCDC61Q9Y6R9 512 aa30■■■□□ 2.39
TSPAN9-208ENST00000640568 SCAF1Q9H7N4 1312 aaKnown RBP30■■■□□ 2.39
TSPAN9-208ENST00000640568 KIF1AQ12756 1690 aa30■■■□□ 2.39
TSPAN9-208ENST00000640568 ROBO1Q9Y6N7 1651 aa29.98■■■□□ 2.39
TSPAN9-208ENST00000640568 PIP4K2BP78356 416 aa29.98■■■□□ 2.39
TSPAN9-208ENST00000640568 PPIP5K1Q6PFW1 1433 aa29.98■■■□□ 2.39
TSPAN9-208ENST00000640568 TMC1Q8TDI8 760 aa29.96■■■□□ 2.39
TSPAN9-208ENST00000640568 ORAI2Q96SN7 254 aa29.96■■■□□ 2.39
TSPAN9-208ENST00000640568 C11orf95C9JLR9 678 aaPredicted RBP29.95■■■□□ 2.39
TSPAN9-208ENST00000640568 PHF8Q9UPP1 1060 aa29.95■■■□□ 2.39
TSPAN9-208ENST00000640568 KIF7Q2M1P5 1343 aa29.94■■■□□ 2.38
TSPAN9-208ENST00000640568 PMFBP1Q8TBY8 1022 aa29.93■■■□□ 2.38
TSPAN9-208ENST00000640568 BRINP3Q76B58 766 aa29.93■■■□□ 2.38
TSPAN9-208ENST00000640568 CABP1Q9NZU7 370 aa29.93■■■□□ 2.38
TSPAN9-208ENST00000640568 NINLQ9Y2I6 1382 aa29.92■■■□□ 2.38
TSPAN9-208ENST00000640568 MYOM1P52179 1685 aa29.92■■■□□ 2.38
TSPAN9-208ENST00000640568 CCDC7Q96M83 1385 aa29.91■■■□□ 2.38
TSPAN9-208ENST00000640568 NGDNQ8NEJ9 315 aaKnown RBP29.9■■■□□ 2.38
TSPAN9-208ENST00000640568 WASHC2AQ641Q2 1341 aa29.89■■■□□ 2.37
TSPAN9-208ENST00000640568 PLEKHG3A1L390 1219 aa29.87■■■□□ 2.37
TSPAN9-208ENST00000640568 NHSL1Q5SYE7 1610 aa29.87■■■□□ 2.37
TSPAN9-208ENST00000640568 AKAP12Q02952 1782 aa29.87■■■□□ 2.37
TSPAN9-208ENST00000640568 SLC12A5Q9H2X9 1139 aa29.87■■■□□ 2.37
TSPAN9-208ENST00000640568 ZNF316A6NFI3 1004 aaPredicted RBP29.86■■■□□ 2.37
TSPAN9-208ENST00000640568 ACEP12821 1306 aa29.85■■■□□ 2.37
TSPAN9-208ENST00000640568 NPHP3Q7Z494 1330 aa29.84■■■□□ 2.37
TSPAN9-208ENST00000640568 FOXO3O43524 673 aa29.84■■■□□ 2.37
TSPAN9-208ENST00000640568 HDGFL2Q7Z4V5 671 aaPredicted RBP29.84■■■□□ 2.37
TSPAN9-208ENST00000640568 TERF2IPQ9NYB0 399 aa29.83■■■□□ 2.37
TSPAN9-208ENST00000640568 POLR3AO14802 1390 aaPredicted RBP29.83■■■□□ 2.37
TSPAN9-208ENST00000640568 PSME1Q06323 249 aa29.82■■■□□ 2.36
TSPAN9-208ENST00000640568 PHLPP1O60346 1717 aa29.82■■■□□ 2.36
TSPAN9-208ENST00000640568 AHDC1Q5TGY3 1603 aaPredicted RBP29.81■■■□□ 2.36
TSPAN9-208ENST00000640568 MON2Q7Z3U7 1717 aa29.8■■■□□ 2.36
TSPAN9-208ENST00000640568 ZNF692Q9BU19 519 aaPredicted RBP29.8■■■□□ 2.36
TSPAN9-208ENST00000640568 ANKRD36BQ8N2N9 1353 aa29.79■■■□□ 2.36
TSPAN9-208ENST00000640568 DDX17Q92841 729 aaKnown RBP29.79■■■□□ 2.36
TSPAN9-208ENST00000640568 A0A1W2PP64 1363 aa29.78■■■□□ 2.36
TSPAN9-208ENST00000640568 KTN1Q86UP2 1357 aaKnown RBP29.78■■■□□ 2.36
TSPAN9-208ENST00000640568 CD163L1Q9NR16 1453 aa29.78■■■□□ 2.36
TSPAN9-208ENST00000640568 XPCQ01831 940 aaPredicted RBP29.76■■■□□ 2.35
TSPAN9-208ENST00000640568 KRT28Q7Z3Y7 464 aa29.76■■■□□ 2.35
TSPAN9-208ENST00000640568 FBXO41Q8TF61 875 aa29.76■■■□□ 2.35
TSPAN9-208ENST00000640568 CPSF1Q10570 1443 aaKnown RBP29.76■■■□□ 2.35
TSPAN9-208ENST00000640568 USP6P35125 1406 aa29.75■■■□□ 2.35
TSPAN9-208ENST00000640568 PXDNQ92626 1479 aa29.73■■■□□ 2.35
TSPAN9-208ENST00000640568 TRPM3Q9HCF6 1732 aaPredicted RBP29.72■■■□□ 2.35
TSPAN9-208ENST00000640568 NRKQ7Z2Y5 1582 aa29.71■■■□□ 2.35
TSPAN9-208ENST00000640568 SOS2Q07890 1332 aaPredicted RBP29.71■■■□□ 2.35
TSPAN9-208ENST00000640568 PAK3O75914 559 aaPredicted RBP29.71■■■□□ 2.35
TSPAN9-208ENST00000640568 PANK3Q9H999 370 aa29.71■■■□□ 2.35
TSPAN9-208ENST00000640568 BRD4O60885 1362 aaPredicted RBP29.71■■■□□ 2.35
TSPAN9-208ENST00000640568 COL16A1Q07092 1604 aaPredicted RBP29.7■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms