RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 GMPR2Q9P2T1 348 aaKnown RBP10.46□□□□□ -0.73
AP3S1-209ENST00000640413 TREML4Q6UXN2 200 aa10.45□□□□□ -0.74
AP3S1-209ENST00000640413 KDM2AQ9Y2K7 1162 aa10.45□□□□□ -0.74
AP3S1-209ENST00000640413 Q3C1V9 767 aa10.44□□□□□ -0.74
AP3S1-209ENST00000640413 HLA-CQ95604 372 aa10.44□□□□□ -0.74
AP3S1-209ENST00000640413 TRIM32Q13049 653 aa10.43□□□□□ -0.74
AP3S1-209ENST00000640413 KDM4AO75164 1064 aa10.42□□□□□ -0.74
AP3S1-209ENST00000640413 MMP16P51512 607 aa10.42□□□□□ -0.74
AP3S1-209ENST00000640413 MDM2Q00987 491 aaPredicted RBP10.42□□□□□ -0.74
AP3S1-209ENST00000640413 MAP2K5Q13163 448 aa10.42□□□□□ -0.74
AP3S1-209ENST00000640413 CTC1Q2NKJ3 1217 aa10.42□□□□□ -0.74
AP3S1-209ENST00000640413 LCE2AQ5TA79 106 aaPredicted RBP10.42□□□□□ -0.74
AP3S1-209ENST00000640413 C11orf95C9JLR9 678 aaPredicted RBP10.41□□□□□ -0.74
AP3S1-209ENST00000640413 WNT7AO00755 349 aa10.41□□□□□ -0.74
AP3S1-209ENST00000640413 USB1Q9BQ65 265 aaKnown RBP10.41□□□□□ -0.74
AP3S1-209ENST00000640413 IRF6O14896 467 aa10.4□□□□□ -0.74
AP3S1-209ENST00000640413 SMPD1P17405 629 aa10.4□□□□□ -0.74
AP3S1-209ENST00000640413 SMCPP49901 116 aaPredicted RBP10.4□□□□□ -0.74
AP3S1-209ENST00000640413 SNIP1Q8TAD8 396 aaKnown RBP10.4□□□□□ -0.74
AP3S1-209ENST00000640413 MRGPRX2Q96LB1 330 aa10.4□□□□□ -0.74
AP3S1-209ENST00000640413 J3QL48 77 aa10.39□□□□□ -0.75
AP3S1-209ENST00000640413 DXOO77932 396 aaKnown RBP10.39□□□□□ -0.75
AP3S1-209ENST00000640413 CCDC24Q8N4L8 307 aa10.39□□□□□ -0.75
AP3S1-209ENST00000640413 GUCA2AQ02747 115 aa10.37□□□□□ -0.75
AP3S1-209ENST00000640413 HOXA2O43364 376 aa10.35□□□□□ -0.75
AP3S1-209ENST00000640413 MINK1Q8N4C8 1332 aaPredicted RBP10.34□□□□□ -0.75
AP3S1-209ENST00000640413 WFS1O76024 890 aa10.34□□□□□ -0.75
AP3S1-209ENST00000640413 USP46P62068 366 aa10.34□□□□□ -0.75
AP3S1-209ENST00000640413 SYMPKQ92797 1274 aaKnown RBP10.34□□□□□ -0.75
AP3S1-209ENST00000640413 ATP13A2Q9NQ11 1180 aa10.34□□□□□ -0.75
AP3S1-209ENST00000640413 SKOR1P84550 965 aa10.33□□□□□ -0.76
AP3S1-209ENST00000640413 HPS1Q92902 700 aa10.33□□□□□ -0.76
AP3S1-209ENST00000640413 CCDC102AQ96A19 550 aa10.33□□□□□ -0.76
AP3S1-209ENST00000640413 RC3H1Q5TC82 1133 aaKnown RBP10.32□□□□□ -0.76
AP3S1-209ENST00000640413 TULP1O00294 542 aaPredicted RBP10.31□□□□□ -0.76
AP3S1-209ENST00000640413 SNRPBP14678 240 aaKnown RBP10.31□□□□□ -0.76
AP3S1-209ENST00000640413 NFX1Q12986 1120 aaKnown RBP10.3□□□□□ -0.76
AP3S1-209ENST00000640413 REPIN1Q9BWE0 567 aaKnown RBP10.3□□□□□ -0.76
AP3S1-209ENST00000640413 JUNDP17535 347 aa10.29□□□□□ -0.76
AP3S1-209ENST00000640413 GPCPD1Q9NPB8 672 aa10.29□□□□□ -0.76
AP3S1-209ENST00000640413 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
AP3S1-209ENST00000640413 WNT7BP56706 349 aa10.28□□□□□ -0.76
AP3S1-209ENST00000640413 CLCN1P35523 988 aa10.27□□□□□ -0.77
AP3S1-209ENST00000640413 NUTM1Q86Y26 1132 aa10.27□□□□□ -0.77
AP3S1-209ENST00000640413 PTCRAQ6ISU1 281 aaPredicted RBP10.26□□□□□ -0.77
AP3S1-209ENST00000640413 ALDH1A1P00352 501 aa10.25□□□□□ -0.77
AP3S1-209ENST00000640413 TRIM47Q96LD4 638 aa10.25□□□□□ -0.77
AP3S1-209ENST00000640413 LCE2CQ5TA81 110 aa10.24□□□□□ -0.77
AP3S1-209ENST00000640413 RETREG3Q86VR2 466 aa10.24□□□□□ -0.77
AP3S1-209ENST00000640413 KRI1Q8N9T8 703 aaKnown RBP10.24□□□□□ -0.77
AP3S1-209ENST00000640413 NUDT12Q9BQG2 462 aa10.24□□□□□ -0.77
AP3S1-209ENST00000640413 SENP2Q9HC62 589 aa10.24□□□□□ -0.77
AP3S1-209ENST00000640413 PCDHGC3Q9UN70 934 aa10.23□□□□□ -0.77
AP3S1-209ENST00000640413 FDX1P10109 184 aa10.22□□□□□ -0.77
AP3S1-209ENST00000640413 C6orf229H3BNL8 230 aa10.21□□□□□ -0.77
AP3S1-209ENST00000640413 TERTO14746 1132 aaKnown RBP10.21□□□□□ -0.77
AP3S1-209ENST00000640413 SIAH2O43255 324 aa10.2□□□□□ -0.78
AP3S1-209ENST00000640413 VSIG10Q8N0Z9 540 aa10.2□□□□□ -0.78
AP3S1-209ENST00000640413 EHBP1Q8NDI1 1231 aa10.2□□□□□ -0.78
AP3S1-209ENST00000640413 WIPF1O43516 503 aa10.19□□□□□ -0.78
AP3S1-209ENST00000640413 KIFC2Q96AC6 838 aa10.19□□□□□ -0.78
AP3S1-209ENST00000640413 NDUFV2P19404 249 aa10.18□□□□□ -0.78
AP3S1-209ENST00000640413 SSTR3P32745 418 aaPredicted RBP10.18□□□□□ -0.78
AP3S1-209ENST00000640413 SPIRE2Q8WWL2 714 aa10.18□□□□□ -0.78
AP3S1-209ENST00000640413 MS4A1P11836 297 aa10.17□□□□□ -0.78
AP3S1-209ENST00000640413 SH3BP2P78314 561 aa10.17□□□□□ -0.78
AP3S1-209ENST00000640413 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.17□□□□□ -0.78
AP3S1-209ENST00000640413 CCNYL3P0C7X3 344 aa10.16□□□□□ -0.78
AP3S1-209ENST00000640413 BMP1P13497 986 aa10.16□□□□□ -0.78
AP3S1-209ENST00000640413 WASF2Q9Y6W5 498 aa10.16□□□□□ -0.78
AP3S1-209ENST00000640413 INSM1Q01101 510 aaPredicted RBP10.15□□□□□ -0.78
AP3S1-209ENST00000640413 LINC01559Q495D7 138 aa10.15□□□□□ -0.78
AP3S1-209ENST00000640413 TRIM46Q7Z4K8 759 aa10.15□□□□□ -0.78
AP3S1-209ENST00000640413 STK17AQ9UEE5 414 aa10.15□□□□□ -0.78
AP3S1-209ENST00000640413 MOXD2PA6NHM9 499 aa10.14□□□□□ -0.79
AP3S1-209ENST00000640413 CAPN5O15484 640 aaPredicted RBP10.14□□□□□ -0.79
AP3S1-209ENST00000640413 BAP1Q92560 729 aa10.13□□□□□ -0.79
AP3S1-209ENST00000640413 UNC93B1Q9H1C4 597 aa10.13□□□□□ -0.79
AP3S1-209ENST00000640413 EVA1BQ9NVM1 165 aa10.13□□□□□ -0.79
AP3S1-209ENST00000640413 PTPRNQ16849 979 aa10.12□□□□□ -0.79
AP3S1-209ENST00000640413 PRR7Q8TB68 274 aa10.12□□□□□ -0.79
AP3S1-209ENST00000640413 TTLL12Q14166 644 aaPredicted RBP10.11□□□□□ -0.79
AP3S1-209ENST00000640413 TLL2Q9Y6L7 1015 aa10.11□□□□□ -0.79
AP3S1-209ENST00000640413 KCNH2Q12809 1159 aa10.1□□□□□ -0.79
AP3S1-209ENST00000640413 NXF1Q9UBU9 619 aaKnown RBP10.09□□□□□ -0.79
AP3S1-209ENST00000640413 VEGFBP49765 207 aa10.08□□□□□ -0.8
AP3S1-209ENST00000640413 MTMR2Q13614 643 aa10.08□□□□□ -0.8
AP3S1-209ENST00000640413 GIGYF2Q6Y7W6 1299 aaKnown RBP10.08□□□□□ -0.8
AP3S1-209ENST00000640413 BARGINQ6ZT62 677 aa10.08□□□□□ -0.8
AP3S1-209ENST00000640413 SLC16A10Q8TF71 515 aa10.08□□□□□ -0.8
AP3S1-209ENST00000640413 ZNF511Q8NB15 262 aa10.07□□□□□ -0.8
AP3S1-209ENST00000640413 BEGAINQ9BUH8 593 aa10.06□□□□□ -0.8
AP3S1-209ENST00000640413 ZMYND10O75800 440 aa10.05□□□□□ -0.8
AP3S1-209ENST00000640413 GMPRP36959 345 aa10.05□□□□□ -0.8
AP3S1-209ENST00000640413 AMHR2Q16671 573 aa10.05□□□□□ -0.8
AP3S1-209ENST00000640413 ZFP42Q96MM3 310 aa10.05□□□□□ -0.8
AP3S1-209ENST00000640413 SPDYE5A6NIY4 337 aa10.04□□□□□ -0.8
AP3S1-209ENST00000640413 VARSP26640 1264 aaKnown RBP10.04□□□□□ -0.8
AP3S1-209ENST00000640413 NNTQ13423 1086 aa10.04□□□□□ -0.8
AP3S1-209ENST00000640413 DESI1Q6ICB0 168 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms