RNA–Protein interactions for RNA: ENST00000640352.1

CNTN2-231, Transcript of contactin 2, human

TSL 5

Gene CNTN2, Length 4,000 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-231	ENST00000640352	DDX17	Q92841	729 aa	Known RBP	11.17	□□□□□ -0.62
CNTN2-231	ENST00000640352	ADAMTS8	Q9UP79	889 aa		11.17	□□□□□ -0.62
CNTN2-231	ENST00000640352	NEUROD2	Q15784	382 aa		11.16	□□□□□ -0.62
CNTN2-231	ENST00000640352	BCORL1	Q5H9F3	1711 aa		11.16	□□□□□ -0.62
CNTN2-231	ENST00000640352	PSME1	Q06323	249 aa		11.16	□□□□□ -0.62
CNTN2-231	ENST00000640352	TCOF1	Q13428	1488 aa	Known RBP	11.16	□□□□□ -0.62
CNTN2-231	ENST00000640352	NFKBIB	Q15653	356 aa		11.16	□□□□□ -0.62
CNTN2-231	ENST00000640352	CDC42BPA	Q5VT25	1732 aa		11.16	□□□□□ -0.62
CNTN2-231	ENST00000640352	DUOX2	Q9NRD8	1548 aa		11.15	□□□□□ -0.62
CNTN2-231	ENST00000640352	ARAP3	Q8WWN8	1544 aa		11.14	□□□□□ -0.63
CNTN2-231	ENST00000640352	PZP	P20742	1482 aa		11.14	□□□□□ -0.63
CNTN2-231	ENST00000640352	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.14	□□□□□ -0.63
CNTN2-231	ENST00000640352	FRAT1	Q92837	279 aa	Predicted RBP	11.14	□□□□□ -0.63
CNTN2-231	ENST00000640352	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.14	□□□□□ -0.63
CNTN2-231	ENST00000640352	NPAT	Q14207	1427 aa		11.14	□□□□□ -0.63
CNTN2-231	ENST00000640352	SLC12A5	Q9H2X9	1139 aa		11.14	□□□□□ -0.63
CNTN2-231	ENST00000640352	PREX2	Q70Z35	1606 aa		11.14	□□□□□ -0.63
CNTN2-231	ENST00000640352	UGGT1	Q9NYU2	1555 aa		11.13	□□□□□ -0.63
CNTN2-231	ENST00000640352	CDC42BPB	Q9Y5S2	1711 aa		11.13	□□□□□ -0.63
CNTN2-231	ENST00000640352	MAP3K4	Q9Y6R4	1608 aa		11.13	□□□□□ -0.63
CNTN2-231	ENST00000640352	BRD4	O60885	1362 aa	Predicted RBP	11.13	□□□□□ -0.63
CNTN2-231	ENST00000640352	FRAT2	O75474	233 aa	Predicted RBP	11.13	□□□□□ -0.63
CNTN2-231	ENST00000640352	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.13	□□□□□ -0.63
CNTN2-231	ENST00000640352	MLH3	Q9UHC1	1453 aa		11.13	□□□□□ -0.63
CNTN2-231	ENST00000640352	CFAP53	Q96M91	514 aa		11.13	□□□□□ -0.63
CNTN2-231	ENST00000640352	UHRF1BP1	Q6BDS2	1440 aa		11.12	□□□□□ -0.63
CNTN2-231	ENST00000640352	GCC2	Q8IWJ2	1684 aa		11.12	□□□□□ -0.63
CNTN2-231	ENST00000640352	CABP1	Q9NZU7	370 aa		11.12	□□□□□ -0.63
CNTN2-231	ENST00000640352	CFAP74	Q9C0B2	1584 aa		11.11	□□□□□ -0.63
CNTN2-231	ENST00000640352	MS4A1	P11836	297 aa		11.11	□□□□□ -0.63
CNTN2-231	ENST00000640352	TAF7L	Q5H9L4	462 aa		11.11	□□□□□ -0.63
CNTN2-231	ENST00000640352	ADAMTS2	O95450	1211 aa		11.11	□□□□□ -0.63
CNTN2-231	ENST00000640352	APP	P05067	770 aa		11.11	□□□□□ -0.63
CNTN2-231	ENST00000640352	GOLGA2	Q08379	1002 aa		11.11	□□□□□ -0.63
CNTN2-231	ENST00000640352	FAM135A	Q9P2D6	1515 aa		11.11	□□□□□ -0.63
CNTN2-231	ENST00000640352	CSB-PGBD3	P0DP91	1061 aa		11.11	□□□□□ -0.63
CNTN2-231	ENST00000640352	U2SURP	O15042	1029 aa	Known RBP	11.1	□□□□□ -0.63
CNTN2-231	ENST00000640352	FBLN1	P23142	703 aa		11.1	□□□□□ -0.63
CNTN2-231	ENST00000640352	CDK19	Q9BWU1	502 aa		11.1	□□□□□ -0.63
CNTN2-231	ENST00000640352	GGNBP2	Q9H3C7	697 aa		11.1	□□□□□ -0.63
CNTN2-231	ENST00000640352	DNMT1	P26358	1616 aa	Known RBP	11.09	□□□□□ -0.63
CNTN2-231	ENST00000640352	BCAR3	O75815	825 aa		11.09	□□□□□ -0.63
CNTN2-231	ENST00000640352	MAGI2	Q86UL8	1455 aa		11.09	□□□□□ -0.63
CNTN2-231	ENST00000640352	LRPPRC	P42704	1394 aa	Known RBP	11.09	□□□□□ -0.63
CNTN2-231	ENST00000640352	RIMS2	Q9UQ26	1411 aa		11.08	□□□□□ -0.63
CNTN2-231	ENST00000640352	FTSJ3	Q8IY81	847 aa	Known RBP	11.08	□□□□□ -0.64
CNTN2-231	ENST00000640352	PER1	O15534	1290 aa	Predicted RBP	11.08	□□□□□ -0.64
CNTN2-231	ENST00000640352	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.08	□□□□□ -0.64
CNTN2-231	ENST00000640352	BBX	Q8WY36	941 aa	Predicted RBP	11.08	□□□□□ -0.64
CNTN2-231	ENST00000640352	HECW2	Q9P2P5	1572 aa		11.08	□□□□□ -0.64
CNTN2-231	ENST00000640352	GOLGA6L3	A6NEY3	463 aa		11.08	□□□□□ -0.64
CNTN2-231	ENST00000640352	DISP3	Q9P2K9	1392 aa		11.08	□□□□□ -0.64
CNTN2-231	ENST00000640352	ZC3H6	P61129	1189 aa	Known RBP	11.07	□□□□□ -0.64
CNTN2-231	ENST00000640352	MEX3C	Q5U5Q3	659 aa	Known RBP	11.07	□□□□□ -0.64
CNTN2-231	ENST00000640352	APAF1	O14727	1248 aa		11.07	□□□□□ -0.64
CNTN2-231	ENST00000640352	FAM161A	Q3B820	660 aa		11.07	□□□□□ -0.64
CNTN2-231	ENST00000640352	GOLGA6L22	H0YM25	854 aa		11.07	□□□□□ -0.64
CNTN2-231	ENST00000640352	NLRP6	P59044	892 aa		11.07	□□□□□ -0.64
CNTN2-231	ENST00000640352	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.07	□□□□□ -0.64
CNTN2-231	ENST00000640352	MORC1	Q86VD1	984 aa		11.07	□□□□□ -0.64
CNTN2-231	ENST00000640352	CABLES1	Q8TDN4	633 aa		11.07	□□□□□ -0.64
CNTN2-231	ENST00000640352	BCL2L13	Q9BXK5	485 aa		11.06	□□□□□ -0.64
CNTN2-231	ENST00000640352	DMRT2	Q9Y5R5	561 aa		11.06	□□□□□ -0.64
CNTN2-231	ENST00000640352	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.06	□□□□□ -0.64
CNTN2-231	ENST00000640352	DHX37	Q8IY37	1157 aa	Known RBP	11.06	□□□□□ -0.64
CNTN2-231	ENST00000640352	ORAI2	Q96SN7	254 aa		11.06	□□□□□ -0.64
CNTN2-231	ENST00000640352	RRP7A	Q9Y3A4	280 aa	Known RBP	11.06	□□□□□ -0.64
CNTN2-231	ENST00000640352	EVC2	Q86UK5	1308 aa		11.06	□□□□□ -0.64
CNTN2-231	ENST00000640352	ABTB2	Q8N961	1025 aa		11.06	□□□□□ -0.64
CNTN2-231	ENST00000640352	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.06	□□□□□ -0.64
CNTN2-231	ENST00000640352	TULP1	O00294	542 aa	Predicted RBP	11.05	□□□□□ -0.64
CNTN2-231	ENST00000640352	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.05	□□□□□ -0.64
CNTN2-231	ENST00000640352	STRN4	Q9NRL3	753 aa		11.05	□□□□□ -0.64
CNTN2-231	ENST00000640352	LMTK3	Q96Q04	1460 aa		11.04	□□□□□ -0.64
CNTN2-231	ENST00000640352	CLUAP1	Q96AJ1	413 aa		11.04	□□□□□ -0.64
CNTN2-231	ENST00000640352	COG6	Q9Y2V7	657 aa		11.04	□□□□□ -0.64
CNTN2-231	ENST00000640352	PANK1	Q8TE04	598 aa		11.04	□□□□□ -0.64
CNTN2-231	ENST00000640352	SHANK2	Q9UPX8	1470 aa		11.03	□□□□□ -0.64
CNTN2-231	ENST00000640352	NUDT16	Q96DE0	195 aa	Known RBP	11.03	□□□□□ -0.64
CNTN2-231	ENST00000640352	C14orf93	Q9H972	538 aa	Known RBP	11.03	□□□□□ -0.64
CNTN2-231	ENST00000640352	PPP2R1A	P30153	589 aa		11.03	□□□□□ -0.64
CNTN2-231	ENST00000640352	C8orf34	Q49A92	452 aa		11.03	□□□□□ -0.64
CNTN2-231	ENST00000640352	DUSP27	Q5VZP5	1158 aa		11.03	□□□□□ -0.64
CNTN2-231	ENST00000640352	KDM5C	P41229	1560 aa		11.03	□□□□□ -0.64
CNTN2-231	ENST00000640352	PLEKHH1	Q9ULM0	1364 aa		11.02	□□□□□ -0.64
CNTN2-231	ENST00000640352	SEC24B	O95487	1268 aa		11.02	□□□□□ -0.64
CNTN2-231	ENST00000640352	MYH16	Q9H6N6	1097 aa		11.02	□□□□□ -0.64
CNTN2-231	ENST00000640352	TERF2IP	Q9NYB0	399 aa		11.02	□□□□□ -0.64
CNTN2-231	ENST00000640352	TMEM2	Q9UHN6	1383 aa		11.02	□□□□□ -0.65
CNTN2-231	ENST00000640352	AMPH	P49418	695 aa		11.02	□□□□□ -0.65
CNTN2-231	ENST00000640352	PHF23	Q9BUL5	403 aa	Predicted RBP	11.02	□□□□□ -0.65
CNTN2-231	ENST00000640352	HSP90AB1	P08238	724 aa	Known RBP	11.02	□□□□□ -0.65
CNTN2-231	ENST00000640352	HSCB	Q8IWL3	235 aa		11.02	□□□□□ -0.65
CNTN2-231	ENST00000640352	TESK2	Q96S53	571 aa		11.02	□□□□□ -0.65
CNTN2-231	ENST00000640352	PPRC1	Q5VV67	1664 aa	Known RBP	11.02	□□□□□ -0.65
CNTN2-231	ENST00000640352	MAPK8IP3	Q9UPT6	1336 aa		11.02	□□□□□ -0.65
CNTN2-231	ENST00000640352	IGHD	P01880	384 aa		11.01	□□□□□ -0.65
CNTN2-231	ENST00000640352	PTPRM	P28827	1452 aa		11.01	□□□□□ -0.65
CNTN2-231	ENST00000640352	PARD3	Q8TEW0	1356 aa		11.01	□□□□□ -0.65
CNTN2-231	ENST00000640352	FGD1	P98174	961 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms