RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 TPM4P67936 248 aa13.58□□□□□ -0.24
SCN1B-208ENST00000640135 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.24
SCN1B-208ENST00000640135 AKAP17AQ02040 695 aaKnown RBP13.58□□□□□ -0.24
SCN1B-208ENST00000640135 SLC26A8Q96RN1 970 aa13.57□□□□□ -0.24
SCN1B-208ENST00000640135 HMOX1P09601 288 aa13.57□□□□□ -0.24
SCN1B-208ENST00000640135 DENND4BO75064 1496 aaPredicted RBP13.57□□□□□ -0.24
SCN1B-208ENST00000640135 KIF21AQ7Z4S6 1674 aa13.57□□□□□ -0.24
SCN1B-208ENST00000640135 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
SCN1B-208ENST00000640135 CCDC30Q5VVM6 783 aa13.56□□□□□ -0.24
SCN1B-208ENST00000640135 BCL2L13Q9BXK5 485 aa13.56□□□□□ -0.24
SCN1B-208ENST00000640135 MARCH6O60337 910 aa13.56□□□□□ -0.24
SCN1B-208ENST00000640135 REC8O95072 547 aa13.56□□□□□ -0.24
SCN1B-208ENST00000640135 ZKSCAN1P17029 563 aaPredicted RBP13.56□□□□□ -0.24
SCN1B-208ENST00000640135 KIAA2012Q0VF49 1180 aa13.56□□□□□ -0.24
SCN1B-208ENST00000640135 KCNH5Q8NCM2 988 aa13.56□□□□□ -0.24
SCN1B-208ENST00000640135 RASSF8Q8NHQ8 419 aa13.56□□□□□ -0.24
SCN1B-208ENST00000640135 PRDM11Q9NQV5 511 aa13.56□□□□□ -0.24
SCN1B-208ENST00000640135 RRP1P56182 461 aaKnown RBP13.55□□□□□ -0.24
SCN1B-208ENST00000640135 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
SCN1B-208ENST00000640135 CCDC61Q9Y6R9 512 aa13.55□□□□□ -0.24
SCN1B-208ENST00000640135 ERC2O15083 957 aa13.55□□□□□ -0.24
SCN1B-208ENST00000640135 CABP1Q9NZU7 370 aa13.55□□□□□ -0.24
SCN1B-208ENST00000640135 TOM1L2Q6ZVM7 507 aa13.54□□□□□ -0.24
SCN1B-208ENST00000640135 ARHGEF11O15085 1522 aa13.54□□□□□ -0.24
SCN1B-208ENST00000640135 CTDP1Q9Y5B0 961 aaPredicted RBP13.54□□□□□ -0.24
SCN1B-208ENST00000640135 KIF14Q15058 1648 aa13.54□□□□□ -0.24
SCN1B-208ENST00000640135 RNF20Q5VTR2 975 aa13.54□□□□□ -0.24
SCN1B-208ENST00000640135 STRN4Q9NRL3 753 aa13.54□□□□□ -0.24
SCN1B-208ENST00000640135 GNAI3P08754 354 aa13.53□□□□□ -0.24
SCN1B-208ENST00000640135 ATP6V1DQ9Y5K8 247 aa13.53□□□□□ -0.24
SCN1B-208ENST00000640135 TRDNQ13061 729 aa13.53□□□□□ -0.24
SCN1B-208ENST00000640135 KIF6Q6ZMV9 814 aa13.53□□□□□ -0.24
SCN1B-208ENST00000640135 CDK13Q14004 1512 aaKnown RBP13.53□□□□□ -0.24
SCN1B-208ENST00000640135 DRC7Q8IY82 874 aa13.53□□□□□ -0.24
SCN1B-208ENST00000640135 COG6Q9Y2V7 657 aa13.53□□□□□ -0.24
SCN1B-208ENST00000640135 USP35Q9P2H5 1018 aa13.52□□□□□ -0.25
SCN1B-208ENST00000640135 UBTFL1P0CB47 393 aaPredicted RBP13.51□□□□□ -0.25
SCN1B-208ENST00000640135 NBPF1Q3BBV0 1214 aa13.51□□□□□ -0.25
SCN1B-208ENST00000640135 NECTIN2Q92692 538 aa13.51□□□□□ -0.25
SCN1B-208ENST00000640135 TEX14Q8IWB6 1497 aa13.51□□□□□ -0.25
SCN1B-208ENST00000640135 MAP3K1Q13233 1512 aa13.51□□□□□ -0.25
SCN1B-208ENST00000640135 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
SCN1B-208ENST00000640135 SF3A1Q15459 793 aaKnown RBP13.51□□□□□ -0.25
SCN1B-208ENST00000640135 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
SCN1B-208ENST00000640135 PRKAR2BP31323 418 aa13.51□□□□□ -0.25
SCN1B-208ENST00000640135 SLC12A5Q9H2X9 1139 aa13.51□□□□□ -0.25
SCN1B-208ENST00000640135 FAM184AQ8NB25 1140 aa13.5□□□□□ -0.25
SCN1B-208ENST00000640135 PPP2R1AP30153 589 aa13.5□□□□□ -0.25
SCN1B-208ENST00000640135 TCP11L2Q8N4U5 519 aa13.5□□□□□ -0.25
SCN1B-208ENST00000640135 CABP4P57796 275 aa13.49□□□□□ -0.25
SCN1B-208ENST00000640135 CT47B1P0C2W7 299 aaPredicted RBP13.49□□□□□ -0.25
SCN1B-208ENST00000640135 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
SCN1B-208ENST00000640135 APPP05067 770 aa13.48□□□□□ -0.25
SCN1B-208ENST00000640135 NUTM2BA6NNL0 878 aaPredicted RBP13.48□□□□□ -0.25
SCN1B-208ENST00000640135 NUTM2EB1AL46 878 aaPredicted RBP13.48□□□□□ -0.25
SCN1B-208ENST00000640135 H3BQV1 296 aa13.48□□□□□ -0.25
SCN1B-208ENST00000640135 AIMP1Q12904 312 aaKnown RBP13.48□□□□□ -0.25
SCN1B-208ENST00000640135 IFFO2Q5TF58 517 aa13.48□□□□□ -0.25
SCN1B-208ENST00000640135 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
SCN1B-208ENST00000640135 NUTM2AQ8IVF1 878 aaPredicted RBP13.48□□□□□ -0.25
SCN1B-208ENST00000640135 NUDT16Q96DE0 195 aaKnown RBP13.48□□□□□ -0.25
SCN1B-208ENST00000640135 VPS53Q5VIR6 699 aa13.48□□□□□ -0.25
SCN1B-208ENST00000640135 FANCAO15360 1455 aa13.48□□□□□ -0.25
SCN1B-208ENST00000640135 CAMSAP2Q08AD1 1489 aa13.48□□□□□ -0.25
SCN1B-208ENST00000640135 LRPPRCP42704 1394 aaKnown RBP13.48□□□□□ -0.25
SCN1B-208ENST00000640135 FAM161AQ3B820 660 aa13.48□□□□□ -0.25
SCN1B-208ENST00000640135 EIF4G3O43432 1585 aaKnown RBP13.47□□□□□ -0.25
SCN1B-208ENST00000640135 PHF14O94880 888 aa13.47□□□□□ -0.25
SCN1B-208ENST00000640135 ERICH2A1L162 156 aa13.47□□□□□ -0.25
SCN1B-208ENST00000640135 TRIM29Q14134 588 aa13.47□□□□□ -0.25
SCN1B-208ENST00000640135 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
SCN1B-208ENST00000640135 DHX29Q7Z478 1369 aaKnown RBP13.46□□□□□ -0.25
SCN1B-208ENST00000640135 CRBNQ96SW2 442 aa13.46□□□□□ -0.26
SCN1B-208ENST00000640135 KLHL34Q8N239 644 aa13.46□□□□□ -0.26
SCN1B-208ENST00000640135 FBXW7Q969H0 707 aa13.46□□□□□ -0.26
SCN1B-208ENST00000640135 ADAMTS8Q9UP79 889 aa13.46□□□□□ -0.26
SCN1B-208ENST00000640135 ADAMTS12P58397 1594 aa13.45□□□□□ -0.26
SCN1B-208ENST00000640135 ERC1Q8IUD2 1116 aa13.45□□□□□ -0.26
SCN1B-208ENST00000640135 CLASRPQ8N2M8 674 aaKnown RBP13.45□□□□□ -0.26
SCN1B-208ENST00000640135 TCEAL9Q9UHQ7 104 aa13.45□□□□□ -0.26
SCN1B-208ENST00000640135 NAIPQ13075 1403 aa13.45□□□□□ -0.26
SCN1B-208ENST00000640135 CPLX1O14810 134 aa13.45□□□□□ -0.26
SCN1B-208ENST00000640135 MSNP26038 577 aaKnown RBP13.45□□□□□ -0.26
SCN1B-208ENST00000640135 PIP4K2BP78356 416 aa13.45□□□□□ -0.26
SCN1B-208ENST00000640135 ZNF428Q96B54 188 aa13.45□□□□□ -0.26
SCN1B-208ENST00000640135 SLKQ9H2G2 1235 aaPredicted RBP13.45□□□□□ -0.26
SCN1B-208ENST00000640135 TBC1D2BQ9UPU7 963 aa13.45□□□□□ -0.26
SCN1B-208ENST00000640135 FCHSD2O94868 740 aa13.44□□□□□ -0.26
SCN1B-208ENST00000640135 INTS3Q68E01 1043 aaKnown RBP13.44□□□□□ -0.26
SCN1B-208ENST00000640135 NEUROD6Q96NK8 337 aa13.44□□□□□ -0.26
SCN1B-208ENST00000640135 HDGFL1Q5TGJ6 251 aa13.43□□□□□ -0.26
SCN1B-208ENST00000640135 GNL3LQ9NVN8 582 aaKnown RBP13.43□□□□□ -0.26
SCN1B-208ENST00000640135 RBM19Q9Y4C8 960 aaKnown RBP13.43□□□□□ -0.26
SCN1B-208ENST00000640135 TWISTNBQ3B726 338 aaPredicted RBP13.43□□□□□ -0.26
SCN1B-208ENST00000640135 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
SCN1B-208ENST00000640135 ABCC5O15440 1437 aa13.43□□□□□ -0.26
SCN1B-208ENST00000640135 PLIN1O60240 522 aa13.43□□□□□ -0.26
SCN1B-208ENST00000640135 WDR63Q8IWG1 891 aa13.43□□□□□ -0.26
SCN1B-208ENST00000640135 EXOC6Q8TAG9 804 aa13.42□□□□□ -0.26
SCN1B-208ENST00000640135 CADPS2Q86UW7 1296 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms