RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ZFP91Q96JP5 570 aaPredicted RBP11.3□□□□□ -0.6
SCARB2-220ENST00000640076 AK7Q96M32 723 aa11.3□□□□□ -0.6
SCARB2-220ENST00000640076 MYO5BQ9ULV0 1848 aa11.3□□□□□ -0.6
SCARB2-220ENST00000640076 KCTD17Q8N5Z5 321 aa11.3□□□□□ -0.6
SCARB2-220ENST00000640076 KDM4CQ9H3R0 1056 aa11.3□□□□□ -0.6
SCARB2-220ENST00000640076 PTPRMP28827 1452 aa11.29□□□□□ -0.6
SCARB2-220ENST00000640076 NLRP1Q9C000 1473 aa11.29□□□□□ -0.6
SCARB2-220ENST00000640076 IFT172Q9UG01 1749 aa11.29□□□□□ -0.6
SCARB2-220ENST00000640076 UHRF1BP1Q6BDS2 1440 aa11.29□□□□□ -0.6
SCARB2-220ENST00000640076 NUBP1P53384 320 aa11.28□□□□□ -0.6
SCARB2-220ENST00000640076 NBPF8Q3BBV2 869 aa11.28□□□□□ -0.6
SCARB2-220ENST00000640076 ZNF326Q5BKZ1 582 aaKnown RBP11.28□□□□□ -0.6
SCARB2-220ENST00000640076 A2ML1A8K2U0 1454 aa11.28□□□□□ -0.6
SCARB2-220ENST00000640076 KDM5AP29375 1690 aaKnown RBP11.28□□□□□ -0.6
SCARB2-220ENST00000640076 PPLO60437 1756 aa11.28□□□□□ -0.6
SCARB2-220ENST00000640076 SETD1BQ9UPS6 1966 aaKnown RBP11.28□□□□□ -0.6
SCARB2-220ENST00000640076 PRAG1Q86YV5 1406 aa11.28□□□□□ -0.6
SCARB2-220ENST00000640076 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
SCARB2-220ENST00000640076 SPINK5Q9NQ38 1064 aaPredicted RBP11.27□□□□□ -0.61
SCARB2-220ENST00000640076 MYO3AQ8NEV4 1616 aa11.27□□□□□ -0.61
SCARB2-220ENST00000640076 NEXMIFQ5QGS0 1516 aa11.27□□□□□ -0.61
SCARB2-220ENST00000640076 RPGRIP1LQ68CZ1 1315 aa11.27□□□□□ -0.61
SCARB2-220ENST00000640076 MYOM2P54296 1465 aa11.27□□□□□ -0.61
SCARB2-220ENST00000640076 UBR1Q8IWV7 1749 aa11.27□□□□□ -0.61
SCARB2-220ENST00000640076 DCAF8Q5TAQ9 597 aa11.27□□□□□ -0.61
SCARB2-220ENST00000640076 KDM4FA0A1W2PPD8 638 aa11.25□□□□□ -0.61
SCARB2-220ENST00000640076 CCDC82Q8N4S0 544 aa11.25□□□□□ -0.61
SCARB2-220ENST00000640076 NRXN1Q9ULB1 1477 aa11.24□□□□□ -0.61
SCARB2-220ENST00000640076 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
SCARB2-220ENST00000640076 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
SCARB2-220ENST00000640076 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
SCARB2-220ENST00000640076 RALGAPBQ86X10 1494 aa11.24□□□□□ -0.61
SCARB2-220ENST00000640076 CEP170BQ9Y4F5 1589 aaPredicted RBP11.24□□□□□ -0.61
SCARB2-220ENST00000640076 ZFYVE9O95405 1425 aa11.23□□□□□ -0.61
SCARB2-220ENST00000640076 E2F4Q16254 413 aa11.23□□□□□ -0.61
SCARB2-220ENST00000640076 ADGRF5Q8IZF2 1346 aa11.23□□□□□ -0.61
SCARB2-220ENST00000640076 TRPM1Q7Z4N2 1603 aa11.23□□□□□ -0.61
SCARB2-220ENST00000640076 RAD21O60216 631 aa11.23□□□□□ -0.61
SCARB2-220ENST00000640076 IGSF3O75054 1194 aa11.23□□□□□ -0.61
SCARB2-220ENST00000640076 FLIIQ13045 1269 aa11.23□□□□□ -0.61
SCARB2-220ENST00000640076 SMYD5Q6GMV2 418 aa11.23□□□□□ -0.61
SCARB2-220ENST00000640076 ZNF142P52746 1687 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-220ENST00000640076 RIMS2Q9UQ26 1411 aa11.22□□□□□ -0.61
SCARB2-220ENST00000640076 CHRM1P11229 460 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-220ENST00000640076 TRAIPQ9BWF2 469 aa11.22□□□□□ -0.61
SCARB2-220ENST00000640076 TMEM2Q9UHN6 1383 aa11.21□□□□□ -0.61
SCARB2-220ENST00000640076 PIK3C2GO75747 1445 aa11.21□□□□□ -0.61
SCARB2-220ENST00000640076 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.62
SCARB2-220ENST00000640076 RGS22Q8NE09 1264 aa11.21□□□□□ -0.62
SCARB2-220ENST00000640076 KIAA1210Q9ULL0 1709 aa11.2□□□□□ -0.62
SCARB2-220ENST00000640076 THEMISQ8N1K5 641 aaPredicted RBP11.2□□□□□ -0.62
SCARB2-220ENST00000640076 SLIT1O75093 1534 aa11.2□□□□□ -0.62
SCARB2-220ENST00000640076 ARHGAP23Q9P227 1491 aa11.19□□□□□ -0.62
SCARB2-220ENST00000640076 ROCK2O75116 1388 aaKnown RBP11.19□□□□□ -0.62
SCARB2-220ENST00000640076 GPRASP1Q5JY77 1395 aa11.19□□□□□ -0.62
SCARB2-220ENST00000640076 NBPF1Q3BBV0 1214 aa11.19□□□□□ -0.62
SCARB2-220ENST00000640076 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.19□□□□□ -0.62
SCARB2-220ENST00000640076 HDGFP51858 240 aaKnown RBP11.18□□□□□ -0.62
SCARB2-220ENST00000640076 CFAP70Q5T0N1 1121 aa11.17□□□□□ -0.62
SCARB2-220ENST00000640076 LAMC1P11047 1609 aa11.17□□□□□ -0.62
SCARB2-220ENST00000640076 CARD11Q9BXL7 1154 aa11.17□□□□□ -0.62
SCARB2-220ENST00000640076 C14orf93Q9H972 538 aaKnown RBP11.17□□□□□ -0.62
SCARB2-220ENST00000640076 LTKP29376 864 aa11.16□□□□□ -0.62
SCARB2-220ENST00000640076 SETBP1Q9Y6X0 1596 aa11.16□□□□□ -0.62
SCARB2-220ENST00000640076 EID1Q9Y6B2 187 aa11.16□□□□□ -0.62
SCARB2-220ENST00000640076 EIF4G2P78344 907 aaKnown RBP eCLIP11.15□□□□□ -0.62
SCARB2-220ENST00000640076 PDE4DQ08499 809 aa11.15□□□□□ -0.62
SCARB2-220ENST00000640076 TXNDC2Q86VQ3 553 aa11.15□□□□□ -0.62
SCARB2-220ENST00000640076 NRXN3Q9Y4C0 1643 aa11.15□□□□□ -0.62
SCARB2-220ENST00000640076 ADGRB1O14514 1584 aa11.15□□□□□ -0.62
SCARB2-220ENST00000640076 USP47Q96K76 1375 aa11.15□□□□□ -0.63
SCARB2-220ENST00000640076 SCAF11Q99590 1463 aaKnown RBP11.14□□□□□ -0.63
SCARB2-220ENST00000640076 ALKQ9UM73 1620 aa11.14□□□□□ -0.63
SCARB2-220ENST00000640076 A6NJR5 290 aa11.14□□□□□ -0.63
SCARB2-220ENST00000640076 PLEKHG1Q9ULL1 1385 aa11.14□□□□□ -0.63
SCARB2-220ENST00000640076 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
SCARB2-220ENST00000640076 TRIM66O15016 1216 aa11.14□□□□□ -0.63
SCARB2-220ENST00000640076 TRAK2O60296 914 aa11.14□□□□□ -0.63
SCARB2-220ENST00000640076 HSPA5P11021 654 aaKnown RBP11.14□□□□□ -0.63
SCARB2-220ENST00000640076 KRI1Q8N9T8 703 aaKnown RBP11.14□□□□□ -0.63
SCARB2-220ENST00000640076 IQGAP1P46940 1657 aa11.14□□□□□ -0.63
SCARB2-220ENST00000640076 SETD1AO15047 1707 aaKnown RBP11.13□□□□□ -0.63
SCARB2-220ENST00000640076 ASXL1Q8IXJ9 1541 aa11.12□□□□□ -0.63
SCARB2-220ENST00000640076 FAM212AQ96EL1 285 aa11.12□□□□□ -0.63
SCARB2-220ENST00000640076 HIRIP3Q9BW71 556 aaPredicted RBP11.12□□□□□ -0.63
SCARB2-220ENST00000640076 MTMR7Q9Y216 660 aa11.12□□□□□ -0.63
SCARB2-220ENST00000640076 CAPN15O75808 1086 aa11.11□□□□□ -0.63
SCARB2-220ENST00000640076 TMEM132EQ6IEE7 984 aa11.11□□□□□ -0.63
SCARB2-220ENST00000640076 ANKLE2Q86XL3 938 aa11.11□□□□□ -0.63
SCARB2-220ENST00000640076 ADAMTS13Q76LX8 1427 aa11.11□□□□□ -0.63
SCARB2-220ENST00000640076 LMTK3Q96Q04 1460 aa11.1□□□□□ -0.63
SCARB2-220ENST00000640076 ONECUT3O60422 494 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-220ENST00000640076 FAM117AQ9C073 453 aa11.1□□□□□ -0.63
SCARB2-220ENST00000640076 MED14O60244 1454 aa11.1□□□□□ -0.63
SCARB2-220ENST00000640076 AEBP1Q8IUX7 1158 aa11.1□□□□□ -0.63
SCARB2-220ENST00000640076 POLR1AO95602 1720 aaPredicted RBP11.09□□□□□ -0.63
SCARB2-220ENST00000640076 ST20-MTHFSA0A0A6YYL1 179 aa11.09□□□□□ -0.63
SCARB2-220ENST00000640076 METP08581 1390 aa11.09□□□□□ -0.63
SCARB2-220ENST00000640076 DIP2AQ14689 1571 aa11.08□□□□□ -0.64
SCARB2-220ENST00000640076 YTHDC2Q9H6S0 1430 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms