RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 PTCH1Q13635 1447 aa29.12■■■□□ 2.25
SCARB2-219ENST00000639738 WAPLQ7Z5K2 1190 aa29.11■■■□□ 2.25
SCARB2-219ENST00000639738 ZNF335Q9H4Z2 1342 aaPredicted RBP29.08■■■□□ 2.25
SCARB2-219ENST00000639738 TULP4Q9NRJ4 1543 aa29.08■■■□□ 2.25
SCARB2-219ENST00000639738 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.08■■■□□ 2.24
SCARB2-219ENST00000639738 KCNA6P17658 529 aa29.07■■■□□ 2.24
SCARB2-219ENST00000639738 TMF1P82094 1093 aa29.07■■■□□ 2.24
SCARB2-219ENST00000639738 STRCP1A6NGW2 1772 aa29.07■■■□□ 2.24
SCARB2-219ENST00000639738 POGKQ9P215 609 aa29.06■■■□□ 2.24
SCARB2-219ENST00000639738 SLC24A1O60721 1099 aa29.05■■■□□ 2.24
SCARB2-219ENST00000639738 SAFB2Q14151 953 aaKnown RBP eCLIP29.04■■■□□ 2.24
SCARB2-219ENST00000639738 ADGRB2O60241 1585 aa29■■■□□ 2.23
SCARB2-219ENST00000639738 MINK1Q8N4C8 1332 aaPredicted RBP28.99■■■□□ 2.23
SCARB2-219ENST00000639738 DDX10Q13206 875 aaKnown RBP28.97■■■□□ 2.23
SCARB2-219ENST00000639738 PUS7Q96PZ0 661 aaKnown RBP28.97■■■□□ 2.23
SCARB2-219ENST00000639738 MYOM1P52179 1685 aa28.97■■■□□ 2.23
SCARB2-219ENST00000639738 NKTRP30414 1462 aaKnown RBP28.96■■■□□ 2.23
SCARB2-219ENST00000639738 EVC2Q86UK5 1308 aa28.95■■■□□ 2.23
SCARB2-219ENST00000639738 CDCA8Q53HL2 280 aa28.94■■■□□ 2.22
SCARB2-219ENST00000639738 NALCNQ8IZF0 1738 aa28.91■■■□□ 2.22
SCARB2-219ENST00000639738 CDK19Q9BWU1 502 aa28.9■■■□□ 2.22
SCARB2-219ENST00000639738 WASLO00401 505 aaPredicted RBP28.89■■■□□ 2.22
SCARB2-219ENST00000639738 DIEXFQ68CQ4 756 aaKnown RBP28.88■■■□□ 2.21
SCARB2-219ENST00000639738 POLR3GLQ9BT43 218 aa28.88■■■□□ 2.21
SCARB2-219ENST00000639738 CABP2Q9NPB3 220 aa28.88■■■□□ 2.21
SCARB2-219ENST00000639738 XIRP1Q702N8 1843 aaKnown RBP28.85■■■□□ 2.21
SCARB2-219ENST00000639738 ADGRL3Q9HAR2 1447 aa28.84■■■□□ 2.21
SCARB2-219ENST00000639738 RBM33Q96EV2 1170 aaKnown RBP28.84■■■□□ 2.21
SCARB2-219ENST00000639738 PROSER2Q86WR7 435 aaPredicted RBP28.83■■■□□ 2.21
SCARB2-219ENST00000639738 CDC42BPGQ6DT37 1551 aa28.83■■■□□ 2.21
SCARB2-219ENST00000639738 USP32Q8NFA0 1604 aa28.82■■■□□ 2.2
SCARB2-219ENST00000639738 UBAP1LF5GYI3 381 aa28.82■■■□□ 2.2
SCARB2-219ENST00000639738 FMN2Q9NZ56 1722 aa28.82■■■□□ 2.2
SCARB2-219ENST00000639738 NCOA3Q9Y6Q9 1424 aa28.82■■■□□ 2.2
SCARB2-219ENST00000639738 SRPK2P78362 688 aaKnown RBP28.81■■■□□ 2.2
SCARB2-219ENST00000639738 PRR36Q9H6K5 1346 aa28.8■■■□□ 2.2
SCARB2-219ENST00000639738 ATAD2Q6PL18 1390 aa28.8■■■□□ 2.2
SCARB2-219ENST00000639738 ATP7BP35670 1465 aa28.8■■■□□ 2.2
SCARB2-219ENST00000639738 LRRC7Q96NW7 1537 aa28.79■■■□□ 2.2
SCARB2-219ENST00000639738 TMEM94Q12767 1356 aa28.79■■■□□ 2.2
SCARB2-219ENST00000639738 TOPAZ1Q8N9V7 1692 aa28.78■■■□□ 2.2
SCARB2-219ENST00000639738 PER1O15534 1290 aaPredicted RBP28.77■■■□□ 2.2
SCARB2-219ENST00000639738 SLC12A5Q9H2X9 1139 aa28.77■■■□□ 2.2
SCARB2-219ENST00000639738 PANK3Q9H999 370 aa28.76■■■□□ 2.19
SCARB2-219ENST00000639738 RGPD8O14715 1765 aaPredicted RBP28.76■■■□□ 2.19
SCARB2-219ENST00000639738 NUDT16Q96DE0 195 aaKnown RBP28.75■■■□□ 2.19
SCARB2-219ENST00000639738 CD163L1Q9NR16 1453 aa28.75■■■□□ 2.19
SCARB2-219ENST00000639738 NINLQ9Y2I6 1382 aa28.74■■■□□ 2.19
SCARB2-219ENST00000639738 ANKARQ7Z5J8 1434 aa28.71■■■□□ 2.19
SCARB2-219ENST00000639738 C19orf44Q9H6X5 657 aa28.7■■■□□ 2.19
SCARB2-219ENST00000639738 CCDC61Q9Y6R9 512 aa28.7■■■□□ 2.19
SCARB2-219ENST00000639738 CARD14Q9BXL6 1004 aa28.69■■■□□ 2.18
SCARB2-219ENST00000639738 CABP1Q9NZU7 370 aa28.69■■■□□ 2.18
SCARB2-219ENST00000639738 TMC1Q8TDI8 760 aa28.69■■■□□ 2.18
SCARB2-219ENST00000639738 PPIP5K1Q6PFW1 1433 aa28.68■■■□□ 2.18
SCARB2-219ENST00000639738 ITSN1Q15811 1721 aa28.68■■■□□ 2.18
SCARB2-219ENST00000639738 ANKRD36BQ8N2N9 1353 aa28.68■■■□□ 2.18
SCARB2-219ENST00000639738 DCCP43146 1447 aa28.67■■■□□ 2.18
SCARB2-219ENST00000639738 CPSF1Q10570 1443 aaKnown RBP28.66■■■□□ 2.18
SCARB2-219ENST00000639738 AKAP12Q02952 1782 aa28.65■■■□□ 2.18
SCARB2-219ENST00000639738 PLEKHG3A1L390 1219 aa28.65■■■□□ 2.18
SCARB2-219ENST00000639738 A0A1W2PP64 1363 aa28.65■■■□□ 2.18
SCARB2-219ENST00000639738 NUTM2FA1L443 756 aa28.64■■■□□ 2.18
SCARB2-219ENST00000639738 TOM1O60784 492 aa28.64■■■□□ 2.17
SCARB2-219ENST00000639738 C14orf37Q86TY3 774 aa28.63■■■□□ 2.17
SCARB2-219ENST00000639738 MON2Q7Z3U7 1717 aa28.61■■■□□ 2.17
SCARB2-219ENST00000639738 SCAF1Q9H7N4 1312 aaKnown RBP28.6■■■□□ 2.17
SCARB2-219ENST00000639738 MST1RQ04912 1400 aa28.6■■■□□ 2.17
SCARB2-219ENST00000639738 PIP4K2BP78356 416 aa28.59■■■□□ 2.17
SCARB2-219ENST00000639738 AMER1Q5JTC6 1135 aaPredicted RBP28.59■■■□□ 2.17
SCARB2-219ENST00000639738 MIER1Q8N108 512 aa28.59■■■□□ 2.17
SCARB2-219ENST00000639738 TERF2IPQ9NYB0 399 aa28.58■■■□□ 2.17
SCARB2-219ENST00000639738 POLR3AO14802 1390 aaPredicted RBP28.58■■■□□ 2.17
SCARB2-219ENST00000639738 MSH6P52701 1360 aa28.58■■■□□ 2.17
SCARB2-219ENST00000639738 C1orf167Q5SNV9 1468 aa28.57■■■□□ 2.16
SCARB2-219ENST00000639738 NSD3Q9BZ95 1437 aa28.57■■■□□ 2.16
SCARB2-219ENST00000639738 NPC1L1Q9UHC9 1359 aa28.56■■■□□ 2.16
SCARB2-219ENST00000639738 ACEP12821 1306 aa28.54■■■□□ 2.16
SCARB2-219ENST00000639738 HDGFL2Q7Z4V5 671 aaPredicted RBP28.53■■■□□ 2.16
SCARB2-219ENST00000639738 CADPS2Q86UW7 1296 aa28.53■■■□□ 2.16
SCARB2-219ENST00000639738 KNSTRNQ9Y448 316 aa28.53■■■□□ 2.16
SCARB2-219ENST00000639738 NRKQ7Z2Y5 1582 aa28.53■■■□□ 2.16
SCARB2-219ENST00000639738 ATF3P18847 181 aa28.53■■■□□ 2.16
SCARB2-219ENST00000639738 PRKRIP1Q9H875 184 aaPredicted RBP28.53■■■□□ 2.16
SCARB2-219ENST00000639738 SSH2Q76I76 1423 aa28.52■■■□□ 2.16
SCARB2-219ENST00000639738 HSPA1LP34931 641 aa28.51■■■□□ 2.15
SCARB2-219ENST00000639738 PMFBP1Q8TBY8 1022 aa28.51■■■□□ 2.15
SCARB2-219ENST00000639738 ZNF692Q9BU19 519 aaPredicted RBP28.51■■■□□ 2.15
SCARB2-219ENST00000639738 KTN1Q86UP2 1357 aaKnown RBP28.51■■■□□ 2.15
SCARB2-219ENST00000639738 ANP32CO43423 234 aa28.5■■■□□ 2.15
SCARB2-219ENST00000639738 ORAI2Q96SN7 254 aa28.5■■■□□ 2.15
SCARB2-219ENST00000639738 PHF8Q9UPP1 1060 aa28.5■■■□□ 2.15
SCARB2-219ENST00000639738 EDC4Q6P2E9 1401 aaKnown RBP28.49■■■□□ 2.15
SCARB2-219ENST00000639738 PARD3Q8TEW0 1356 aa28.48■■■□□ 2.15
SCARB2-219ENST00000639738 USP6P35125 1406 aa28.48■■■□□ 2.15
SCARB2-219ENST00000639738 KIF1AQ12756 1690 aa28.47■■■□□ 2.15
SCARB2-219ENST00000639738 ESCO1Q5FWF5 840 aa28.46■■■□□ 2.15
SCARB2-219ENST00000639738 KIF20BQ96Q89 1820 aa28.45■■■□□ 2.15
SCARB2-219ENST00000639738 ILDR2Q71H61 639 aa28.44■■■□□ 2.14
SCARB2-219ENST00000639738 CC2D1BQ5T0F9 858 aaKnown RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms