RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	VSIG8	P0DPA2	414 aa		4.87	□□□□□ -1.63
LMBR1-222	ENST00000638959	RBM46	Q8TBY0	533 aa	Known RBP	4.87	□□□□□ -1.63
LMBR1-222	ENST00000638959	CAPN5	O15484	640 aa	Predicted RBP	4.86	□□□□□ -1.63
LMBR1-222	ENST00000638959	ADAMTS8	Q9UP79	889 aa		4.86	□□□□□ -1.63
LMBR1-222	ENST00000638959	RCCD1	A6NED2	376 aa		4.85	□□□□□ -1.63
LMBR1-222	ENST00000638959	ALDH1A1	P00352	501 aa		4.85	□□□□□ -1.63
LMBR1-222	ENST00000638959	FOXK2	Q01167	660 aa		4.85	□□□□□ -1.63
LMBR1-222	ENST00000638959	FAM160A2	Q8N612	972 aa	Predicted RBP	4.85	□□□□□ -1.63
LMBR1-222	ENST00000638959	ADAM23	O75077	832 aa		4.84	□□□□□ -1.63
LMBR1-222	ENST00000638959	FMNL1	O95466	1100 aa	Predicted RBP	4.84	□□□□□ -1.63
LMBR1-222	ENST00000638959	IRS1	P35568	1242 aa		4.84	□□□□□ -1.63
LMBR1-222	ENST00000638959	ZFP42	Q96MM3	310 aa		4.84	□□□□□ -1.63
LMBR1-222	ENST00000638959	THAP11	Q96EK4	314 aa		4.83	□□□□□ -1.64
LMBR1-222	ENST00000638959	RC3H1	Q5TC82	1133 aa	Known RBP	4.82	□□□□□ -1.64
LMBR1-222	ENST00000638959	SOBP	A7XYQ1	873 aa		4.81	□□□□□ -1.64
LMBR1-222	ENST00000638959	FECH	P22830	423 aa		4.81	□□□□□ -1.64
LMBR1-222	ENST00000638959	MORN1	Q5T089	497 aa		4.81	□□□□□ -1.64
LMBR1-222	ENST00000638959	RSPH4A	Q5TD94	716 aa		4.81	□□□□□ -1.64
LMBR1-222	ENST00000638959	WASF2	Q9Y6W5	498 aa		4.81	□□□□□ -1.64
LMBR1-222	ENST00000638959	SVOP	Q8N4V2	548 aa		4.8	□□□□□ -1.64
LMBR1-222	ENST00000638959	ADGRG1	Q9Y653	693 aa		4.8	□□□□□ -1.64
LMBR1-222	ENST00000638959	FAM161A	Q3B820	660 aa		4.79	□□□□□ -1.64
LMBR1-222	ENST00000638959	MSS51	Q4VC12	460 aa		4.79	□□□□□ -1.64
LMBR1-222	ENST00000638959	KANK3	Q6NY19	840 aa		4.79	□□□□□ -1.64
LMBR1-222	ENST00000638959	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	4.78	□□□□□ -1.64
LMBR1-222	ENST00000638959	SKOR1	P84550	965 aa		4.78	□□□□□ -1.64
LMBR1-222	ENST00000638959	LCE3B	Q5TA77	95 aa		4.78	□□□□□ -1.64
LMBR1-222	ENST00000638959		Q8N3U1	123 aa		4.78	□□□□□ -1.64
LMBR1-222	ENST00000638959	SLC27A5	Q9Y2P5	690 aa		4.78	□□□□□ -1.64
LMBR1-222	ENST00000638959	MSTN	O14793	375 aa		4.77	□□□□□ -1.65
LMBR1-222	ENST00000638959	WNT7B	P56706	349 aa		4.77	□□□□□ -1.65
LMBR1-222	ENST00000638959	FUT2	Q10981	343 aa		4.77	□□□□□ -1.65
LMBR1-222	ENST00000638959	SCARF1	Q14162	830 aa		4.77	□□□□□ -1.65
LMBR1-222	ENST00000638959	CNTNAP3B	Q96NU0	1288 aa		4.77	□□□□□ -1.65
LMBR1-222	ENST00000638959	PURB	Q96QR8	312 aa	Known RBP	4.77	□□□□□ -1.65
LMBR1-222	ENST00000638959	CNTNAP3	Q9BZ76	1288 aa		4.77	□□□□□ -1.65
LMBR1-222	ENST00000638959	ATP6V1A	P38606	617 aa		4.76	□□□□□ -1.65
LMBR1-222	ENST00000638959	MARS	P56192	900 aa	Known RBP	4.76	□□□□□ -1.65
LMBR1-222	ENST00000638959	KRT76	Q01546	638 aa		4.76	□□□□□ -1.65
LMBR1-222	ENST00000638959	E2F4	Q16254	413 aa		4.76	□□□□□ -1.65
LMBR1-222	ENST00000638959	MRPL14	Q6P1L8	145 aa	Known RBP	4.76	□□□□□ -1.65
LMBR1-222	ENST00000638959	BRICD5	Q6PL45	260 aa		4.76	□□□□□ -1.65
LMBR1-222	ENST00000638959	RNF19B	Q6ZMZ0	732 aa		4.76	□□□□□ -1.65
LMBR1-222	ENST00000638959	RDH13	Q8NBN7	331 aa		4.76	□□□□□ -1.65
LMBR1-222	ENST00000638959	PPFIA3	O75145	1194 aa		4.75	□□□□□ -1.65
LMBR1-222	ENST00000638959	ZNF385C	Q66K41	422 aa	Predicted RBP	4.75	□□□□□ -1.65
LMBR1-222	ENST00000638959	CCDC24	Q8N4L8	307 aa		4.75	□□□□□ -1.65
LMBR1-222	ENST00000638959	SALL2	Q9Y467	1007 aa	Predicted RBP	4.75	□□□□□ -1.65
LMBR1-222	ENST00000638959	MAN1A2	O60476	641 aa		4.74	□□□□□ -1.65
LMBR1-222	ENST00000638959	PTGDR	Q13258	359 aa		4.74	□□□□□ -1.65
LMBR1-222	ENST00000638959	GALNT6	Q8NCL4	622 aa		4.74	□□□□□ -1.65
LMBR1-222	ENST00000638959	EHBP1	Q8NDI1	1231 aa		4.74	□□□□□ -1.65
LMBR1-222	ENST00000638959	SCARF2	Q96GP6	870 aa	Predicted RBP	4.74	□□□□□ -1.65
LMBR1-222	ENST00000638959	SPOCK3	Q9BQ16	436 aa		4.74	□□□□□ -1.65
LMBR1-222	ENST00000638959	ARIH1	Q9Y4X5	557 aa	Predicted RBP	4.74	□□□□□ -1.65
LMBR1-222	ENST00000638959	MMP16	P51512	607 aa		4.73	□□□□□ -1.65
LMBR1-222	ENST00000638959		K7ELQ4	463 aa	Predicted RBP	4.72	□□□□□ -1.65
LMBR1-222	ENST00000638959	PLA2G4E	Q3MJ16	856 aa		4.72	□□□□□ -1.65
LMBR1-222	ENST00000638959	BTBD11	A6QL63	1104 aa		4.71	□□□□□ -1.66
LMBR1-222	ENST00000638959	SIAH2	O43255	324 aa		4.71	□□□□□ -1.66
LMBR1-222	ENST00000638959	GPR161	Q8N6U8	529 aa	Known RBP	4.7	□□□□□ -1.66
LMBR1-222	ENST00000638959	PXYLP1	Q8TE99	480 aa		4.7	□□□□□ -1.66
LMBR1-222	ENST00000638959	WHAMM	Q8TF30	809 aa		4.7	□□□□□ -1.66
LMBR1-222	ENST00000638959	COL25A1	Q9BXS0	654 aa	Predicted RBP	4.7	□□□□□ -1.66
LMBR1-222	ENST00000638959	DDX11L8	A8MPP1	907 aa		4.69	□□□□□ -1.66
LMBR1-222	ENST00000638959	DXO	O77932	396 aa	Known RBP	4.69	□□□□□ -1.66
LMBR1-222	ENST00000638959	ARHGEF15	O94989	841 aa		4.69	□□□□□ -1.66
LMBR1-222	ENST00000638959	PROC	P04070	461 aa		4.68	□□□□□ -1.66
LMBR1-222	ENST00000638959		Q3C1V9	767 aa		4.68	□□□□□ -1.66
LMBR1-222	ENST00000638959	C6orf118	Q5T5N4	469 aa		4.68	□□□□□ -1.66
LMBR1-222	ENST00000638959	TLL2	Q9Y6L7	1015 aa		4.68	□□□□□ -1.66
LMBR1-222	ENST00000638959	OAT	P04181	439 aa		4.67	□□□□□ -1.66
LMBR1-222	ENST00000638959	TIMP2	P16035	220 aa		4.67	□□□□□ -1.66
LMBR1-222	ENST00000638959	WDR4	P57081	412 aa	Known RBP	4.67	□□□□□ -1.66
LMBR1-222	ENST00000638959	NNT	Q13423	1086 aa		4.67	□□□□□ -1.66
LMBR1-222	ENST00000638959	GRIPAP1	Q4V328	841 aa		4.67	□□□□□ -1.66
LMBR1-222	ENST00000638959	RNFT1	Q5M7Z0	435 aa		4.67	□□□□□ -1.66
LMBR1-222	ENST00000638959	KRTAP4-12	Q9BQ66	201 aa		4.67	□□□□□ -1.66
LMBR1-222	ENST00000638959	ADH1C	P00326	375 aa		4.66	□□□□□ -1.66
LMBR1-222	ENST00000638959	GCGR	P47871	477 aa		4.66	□□□□□ -1.66
LMBR1-222	ENST00000638959	DCAF5	Q96JK2	942 aa		4.66	□□□□□ -1.66
LMBR1-222	ENST00000638959	USB1	Q9BQ65	265 aa	Known RBP	4.66	□□□□□ -1.66
LMBR1-222	ENST00000638959	KRTAP9-9	Q9BYP9	154 aa		4.66	□□□□□ -1.66
LMBR1-222	ENST00000638959	KRTAP9-4	Q9BYQ2	154 aa		4.66	□□□□□ -1.66
LMBR1-222	ENST00000638959	NUTM2F	A1L443	756 aa		4.65	□□□□□ -1.67
LMBR1-222	ENST00000638959	ITGB2	P05107	769 aa		4.65	□□□□□ -1.67
LMBR1-222	ENST00000638959	DCAF8L2	P0C7V8	631 aa		4.65	□□□□□ -1.67
LMBR1-222	ENST00000638959	SLURP2	P0DP57	97 aa		4.65	□□□□□ -1.67
LMBR1-222	ENST00000638959	MAP3K10	Q02779	954 aa		4.65	□□□□□ -1.67
LMBR1-222	ENST00000638959	METTL3	Q86U44	580 aa	Known RBP	4.65	□□□□□ -1.67
LMBR1-222	ENST00000638959	WDR70	Q9NW82	654 aa		4.65	□□□□□ -1.67
LMBR1-222	ENST00000638959	DAXX	Q9UER7	740 aa	Predicted RBP	4.65	□□□□□ -1.67
LMBR1-222	ENST00000638959	KRTAP4-8	A0A0G2JLE6	195 aa		4.64	□□□□□ -1.67
LMBR1-222	ENST00000638959	PLEKHG3	A1L390	1219 aa		4.64	□□□□□ -1.67
LMBR1-222	ENST00000638959	PHF20L1	A8MW92	1017 aa		4.63	□□□□□ -1.67
LMBR1-222	ENST00000638959	BMP2	P12643	396 aa		4.63	□□□□□ -1.67
LMBR1-222	ENST00000638959	MLLT3	P42568	568 aa	Predicted RBP	4.63	□□□□□ -1.67
LMBR1-222	ENST00000638959	DNMT3L	Q9UJW3	386 aa		4.63	□□□□□ -1.67
LMBR1-222	ENST00000638959	FCHSD2	O94868	740 aa		4.62	□□□□□ -1.67
LMBR1-222	ENST00000638959	UPP2	O95045	317 aa		4.62	□□□□□ -1.67

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