RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 MIER1Q8N108 512 aa14.01□□□□□ -0.17
PAX6-242ENST00000638878 TIMELESSQ9UNS1 1208 aa14.01□□□□□ -0.17
PAX6-242ENST00000638878 YTHDC2Q9H6S0 1430 aaKnown RBP14□□□□□ -0.17
PAX6-242ENST00000638878 HSPA1LP34931 641 aa14□□□□□ -0.17
PAX6-242ENST00000638878 TMEM132EQ6IEE7 984 aa14□□□□□ -0.17
PAX6-242ENST00000638878 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
PAX6-242ENST00000638878 ATF3P18847 181 aa13.99□□□□□ -0.17
PAX6-242ENST00000638878 RBM33Q96EV2 1170 aaKnown RBP13.99□□□□□ -0.17
PAX6-242ENST00000638878 ADGRB1O14514 1584 aa13.98□□□□□ -0.17
PAX6-242ENST00000638878 C14orf37Q86TY3 774 aa13.97□□□□□ -0.17
PAX6-242ENST00000638878 ADGRL3Q9HAR2 1447 aa13.97□□□□□ -0.17
PAX6-242ENST00000638878 ASXL1Q8IXJ9 1541 aa13.97□□□□□ -0.17
PAX6-242ENST00000638878 DLC1Q96QB1 1528 aa13.96□□□□□ -0.17
PAX6-242ENST00000638878 MED1Q15648 1581 aaPredicted RBP13.96□□□□□ -0.17
PAX6-242ENST00000638878 KIAA1210Q9ULL0 1709 aa13.96□□□□□ -0.17
PAX6-242ENST00000638878 PIP4K2BP78356 416 aa13.96□□□□□ -0.18
PAX6-242ENST00000638878 FKBP8Q14318 412 aa13.96□□□□□ -0.18
PAX6-242ENST00000638878 KNDC1Q76NI1 1749 aa13.95□□□□□ -0.18
PAX6-242ENST00000638878 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.95□□□□□ -0.18
PAX6-242ENST00000638878 STK26Q9P289 416 aa13.95□□□□□ -0.18
PAX6-242ENST00000638878 PRKCSHP14314 528 aaPredicted RBP13.94□□□□□ -0.18
PAX6-242ENST00000638878 WAPLQ7Z5K2 1190 aa13.94□□□□□ -0.18
PAX6-242ENST00000638878 TONSLQ96HA7 1378 aa13.92□□□□□ -0.18
PAX6-242ENST00000638878 NBPF1Q3BBV0 1214 aa13.91□□□□□ -0.18
PAX6-242ENST00000638878 PRAM1Q96QH2 718 aa13.91□□□□□ -0.18
PAX6-242ENST00000638878 MST1RQ04912 1400 aa13.91□□□□□ -0.18
PAX6-242ENST00000638878 TRAK1Q9UPV9 953 aa13.9□□□□□ -0.18
PAX6-242ENST00000638878 BRINP3Q76B58 766 aa13.89□□□□□ -0.19
PAX6-242ENST00000638878 YTHDC1Q96MU7 727 aaKnown RBP13.89□□□□□ -0.19
PAX6-242ENST00000638878 POGKQ9P215 609 aa13.89□□□□□ -0.19
PAX6-242ENST00000638878 CDC42BPGQ6DT37 1551 aa13.89□□□□□ -0.19
PAX6-242ENST00000638878 NALCNQ8IZF0 1738 aa13.88□□□□□ -0.19
PAX6-242ENST00000638878 GPRASP1Q5JY77 1395 aa13.88□□□□□ -0.19
PAX6-242ENST00000638878 PLEKHH1Q9ULM0 1364 aa13.88□□□□□ -0.19
PAX6-242ENST00000638878 C1orf167Q5SNV9 1468 aa13.87□□□□□ -0.19
PAX6-242ENST00000638878 NBPF8Q3BBV2 869 aa13.87□□□□□ -0.19
PAX6-242ENST00000638878 ROBO1Q9Y6N7 1651 aa13.86□□□□□ -0.19
PAX6-242ENST00000638878 TRPM1Q7Z4N2 1603 aa13.85□□□□□ -0.19
PAX6-242ENST00000638878 PLCB2Q00722 1185 aa13.84□□□□□ -0.19
PAX6-242ENST00000638878 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
PAX6-242ENST00000638878 WASLO00401 505 aaPredicted RBP13.83□□□□□ -0.19
PAX6-242ENST00000638878 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.19
PAX6-242ENST00000638878 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.19
PAX6-242ENST00000638878 ADGRB2O60241 1585 aa13.83□□□□□ -0.19
PAX6-242ENST00000638878 AHDC1Q5TGY3 1603 aaPredicted RBP13.83□□□□□ -0.2
PAX6-242ENST00000638878 ANKARQ7Z5J8 1434 aa13.82□□□□□ -0.2
PAX6-242ENST00000638878 LRRC59Q96AG4 307 aaKnown RBP13.82□□□□□ -0.2
PAX6-242ENST00000638878 ORAI2Q96SN7 254 aa13.82□□□□□ -0.2
PAX6-242ENST00000638878 CENPJQ9HC77 1338 aaPredicted RBP13.81□□□□□ -0.2
PAX6-242ENST00000638878 RALGAPBQ86X10 1494 aa13.81□□□□□ -0.2
PAX6-242ENST00000638878 ARHGEF28Q8N1W1 1705 aaKnown RBP13.81□□□□□ -0.2
PAX6-242ENST00000638878 ESCO1Q5FWF5 840 aa13.81□□□□□ -0.2
PAX6-242ENST00000638878 SOS2Q07890 1332 aaPredicted RBP13.8□□□□□ -0.2
PAX6-242ENST00000638878 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
PAX6-242ENST00000638878 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
PAX6-242ENST00000638878 RGS17Q9UGC6 210 aaPredicted RBP13.8□□□□□ -0.2
PAX6-242ENST00000638878 NPHP3Q7Z494 1330 aa13.79□□□□□ -0.2
PAX6-242ENST00000638878 SBNO2Q9Y2G9 1366 aa13.79□□□□□ -0.2
PAX6-242ENST00000638878 FMN2Q9NZ56 1722 aa13.79□□□□□ -0.2
PAX6-242ENST00000638878 MINK1Q8N4C8 1332 aaPredicted RBP13.79□□□□□ -0.2
PAX6-242ENST00000638878 JCADQ9P266 1359 aa13.78□□□□□ -0.2
PAX6-242ENST00000638878 PUS7Q96PZ0 661 aaKnown RBP13.78□□□□□ -0.2
PAX6-242ENST00000638878 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
PAX6-242ENST00000638878 CDK19Q9BWU1 502 aa13.77□□□□□ -0.21
PAX6-242ENST00000638878 PHF8Q9UPP1 1060 aa13.77□□□□□ -0.21
PAX6-242ENST00000638878 SPATA31A6Q5VVP1 1343 aa13.77□□□□□ -0.21
PAX6-242ENST00000638878 COL16A1Q07092 1604 aaPredicted RBP13.77□□□□□ -0.21
PAX6-242ENST00000638878 NHSL1Q5SYE7 1610 aa13.77□□□□□ -0.21
PAX6-242ENST00000638878 PHLPP1O60346 1717 aa13.76□□□□□ -0.21
PAX6-242ENST00000638878 TULP4Q9NRJ4 1543 aa13.76□□□□□ -0.21
PAX6-242ENST00000638878 FOXO3O43524 673 aa13.76□□□□□ -0.21
PAX6-242ENST00000638878 HIRIP3Q9BW71 556 aaPredicted RBP13.76□□□□□ -0.21
PAX6-242ENST00000638878 CCDC61Q9Y6R9 512 aa13.76□□□□□ -0.21
PAX6-242ENST00000638878 PLEKHG3A1L390 1219 aa13.75□□□□□ -0.21
PAX6-242ENST00000638878 NUDT16Q96DE0 195 aaKnown RBP13.75□□□□□ -0.21
PAX6-242ENST00000638878 EVC2Q86UK5 1308 aa13.75□□□□□ -0.21
PAX6-242ENST00000638878 PSME1Q06323 249 aa13.74□□□□□ -0.21
PAX6-242ENST00000638878 KIF1AQ12756 1690 aa13.74□□□□□ -0.21
PAX6-242ENST00000638878 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
PAX6-242ENST00000638878 PRR36Q9H6K5 1346 aa13.73□□□□□ -0.21
PAX6-242ENST00000638878 PXDNQ92626 1479 aa13.72□□□□□ -0.21
PAX6-242ENST00000638878 SBNO1A3KN83 1393 aa13.71□□□□□ -0.21
PAX6-242ENST00000638878 KRT28Q7Z3Y7 464 aa13.71□□□□□ -0.21
PAX6-242ENST00000638878 USP32Q8NFA0 1604 aa13.71□□□□□ -0.21
PAX6-242ENST00000638878 DDX17Q92841 729 aaKnown RBP13.71□□□□□ -0.21
PAX6-242ENST00000638878 SUPT16HQ9Y5B9 1047 aaKnown RBP13.71□□□□□ -0.21
PAX6-242ENST00000638878 ATP7BP35670 1465 aa13.71□□□□□ -0.22
PAX6-242ENST00000638878 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.22
PAX6-242ENST00000638878 BRD4O60885 1362 aaPredicted RBP13.71□□□□□ -0.22
PAX6-242ENST00000638878 PIAS4Q8N2W9 510 aaPredicted RBP13.71□□□□□ -0.22
PAX6-242ENST00000638878 SHPRHQ149N8 1683 aa13.7□□□□□ -0.22
PAX6-242ENST00000638878 SPATA31A3Q5VYP0 1347 aa13.7□□□□□ -0.22
PAX6-242ENST00000638878 SRPK2P78362 688 aaKnown RBP13.7□□□□□ -0.22
PAX6-242ENST00000638878 TESK2Q96S53 571 aa13.7□□□□□ -0.22
PAX6-242ENST00000638878 QRICH2Q9H0J4 1663 aa13.69□□□□□ -0.22
PAX6-242ENST00000638878 PNPLA6Q8IY17 1366 aa13.69□□□□□ -0.22
PAX6-242ENST00000638878 ST20-MTHFSA0A0A6YYL1 179 aa13.69□□□□□ -0.22
PAX6-242ENST00000638878 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
PAX6-242ENST00000638878 RGPD8O14715 1765 aaPredicted RBP13.68□□□□□ -0.22
PAX6-242ENST00000638878 POTEAQ6S8J7 498 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms