RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 ATAD2Q6PL18 1390 aa17.81■□□□□ 0.44
SCN8A-215ENST00000638820 PLEKHH1Q9ULM0 1364 aa17.81■□□□□ 0.44
SCN8A-215ENST00000638820 NEFLP07196 543 aa17.8■□□□□ 0.44
SCN8A-215ENST00000638820 NSD3Q9BZ95 1437 aa17.8■□□□□ 0.44
SCN8A-215ENST00000638820 TBX22Q9Y458 520 aa17.79■□□□□ 0.44
SCN8A-215ENST00000638820 ABCC11Q96J66 1382 aa17.79■□□□□ 0.44
SCN8A-215ENST00000638820 WASLO00401 505 aaPredicted RBP17.79■□□□□ 0.44
SCN8A-215ENST00000638820 PPM1GO15355 546 aaPredicted RBP17.79■□□□□ 0.44
SCN8A-215ENST00000638820 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
SCN8A-215ENST00000638820 RBM33Q96EV2 1170 aaKnown RBP17.79■□□□□ 0.44
SCN8A-215ENST00000638820 CARD14Q9BXL6 1004 aa17.79■□□□□ 0.44
SCN8A-215ENST00000638820 C3P01024 1663 aa17.79■□□□□ 0.44
SCN8A-215ENST00000638820 PLEKHG1Q9ULL1 1385 aa17.78■□□□□ 0.44
SCN8A-215ENST00000638820 GGNBP2Q9H3C7 697 aa17.78■□□□□ 0.44
SCN8A-215ENST00000638820 BRD4O60885 1362 aaPredicted RBP17.77■□□□□ 0.44
SCN8A-215ENST00000638820 KDM5AP29375 1690 aaKnown RBP17.77■□□□□ 0.44
SCN8A-215ENST00000638820 PPP2R1AP30153 589 aa17.77■□□□□ 0.44
SCN8A-215ENST00000638820 NUDT16Q96DE0 195 aaKnown RBP17.77■□□□□ 0.43
SCN8A-215ENST00000638820 PNISRQ8TF01 805 aaKnown RBP17.75■□□□□ 0.43
SCN8A-215ENST00000638820 CCDC61Q9Y6R9 512 aa17.75■□□□□ 0.43
SCN8A-215ENST00000638820 SETD1BQ9UPS6 1966 aaKnown RBP17.75■□□□□ 0.43
SCN8A-215ENST00000638820 KCNA6P17658 529 aa17.74■□□□□ 0.43
SCN8A-215ENST00000638820 HSPA2P54652 639 aa17.74■□□□□ 0.43
SCN8A-215ENST00000638820 CFAP53Q96M91 514 aa17.74■□□□□ 0.43
SCN8A-215ENST00000638820 QRICH2Q9H0J4 1663 aa17.74■□□□□ 0.43
SCN8A-215ENST00000638820 NGDNQ8NEJ9 315 aaKnown RBP17.74■□□□□ 0.43
SCN8A-215ENST00000638820 PARD3Q8TEW0 1356 aa17.74■□□□□ 0.43
SCN8A-215ENST00000638820 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
SCN8A-215ENST00000638820 PUS7Q96PZ0 661 aaKnown RBP17.73■□□□□ 0.43
SCN8A-215ENST00000638820 SOX12O15370 315 aa17.73■□□□□ 0.43
SCN8A-215ENST00000638820 PLEKHG5O94827 1062 aa17.73■□□□□ 0.43
SCN8A-215ENST00000638820 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
SCN8A-215ENST00000638820 PMFBP1Q8TBY8 1022 aa17.72■□□□□ 0.43
SCN8A-215ENST00000638820 ASXL1Q8IXJ9 1541 aa17.72■□□□□ 0.43
SCN8A-215ENST00000638820 ROBO2Q9HCK4 1378 aa17.71■□□□□ 0.43
SCN8A-215ENST00000638820 UBR1Q8IWV7 1749 aa17.71■□□□□ 0.43
SCN8A-215ENST00000638820 PTPRMP28827 1452 aa17.71■□□□□ 0.42
SCN8A-215ENST00000638820 ANKRD36BQ8N2N9 1353 aa17.7■□□□□ 0.42
SCN8A-215ENST00000638820 ADAMTS13Q76LX8 1427 aa17.69■□□□□ 0.42
SCN8A-215ENST00000638820 A0A1W2PP64 1363 aa17.69■□□□□ 0.42
SCN8A-215ENST00000638820 MTHFSP49914 203 aa17.68■□□□□ 0.42
SCN8A-215ENST00000638820 CEP170BQ9Y4F5 1589 aaPredicted RBP17.68■□□□□ 0.42
SCN8A-215ENST00000638820 U2SURPO15042 1029 aaKnown RBP17.68■□□□□ 0.42
SCN8A-215ENST00000638820 PROSER2Q86WR7 435 aaPredicted RBP17.68■□□□□ 0.42
SCN8A-215ENST00000638820 PAK3O75914 559 aaPredicted RBP17.67■□□□□ 0.42
SCN8A-215ENST00000638820 ARHGEF28Q8N1W1 1705 aaKnown RBP17.67■□□□□ 0.42
SCN8A-215ENST00000638820 NINLQ9Y2I6 1382 aa17.67■□□□□ 0.42
SCN8A-215ENST00000638820 SIRT1Q96EB6 747 aa17.66■□□□□ 0.42
SCN8A-215ENST00000638820 ADAMTS8Q9UP79 889 aa17.66■□□□□ 0.42
SCN8A-215ENST00000638820 TULP4Q9NRJ4 1543 aa17.66■□□□□ 0.42
SCN8A-215ENST00000638820 CCDC146Q8IYE0 955 aa17.66■□□□□ 0.42
SCN8A-215ENST00000638820 NEUROD2Q15784 382 aa17.65■□□□□ 0.42
SCN8A-215ENST00000638820 PPIP5K1Q6PFW1 1433 aa17.65■□□□□ 0.42
SCN8A-215ENST00000638820 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
SCN8A-215ENST00000638820 COG3Q96JB2 828 aa17.64■□□□□ 0.41
SCN8A-215ENST00000638820 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
SCN8A-215ENST00000638820 ZBED9Q6R2W3 1325 aa17.64■□□□□ 0.41
SCN8A-215ENST00000638820 U2AF1L5P0DN76 240 aaPredicted RBP17.63■□□□□ 0.41
SCN8A-215ENST00000638820 U2AF1Q01081 240 aaKnown RBP eCLIP17.63■□□□□ 0.41
SCN8A-215ENST00000638820 MYO3AQ8NEV4 1616 aa17.63■□□□□ 0.41
SCN8A-215ENST00000638820 FYB1O15117 783 aa17.63■□□□□ 0.41
SCN8A-215ENST00000638820 FAM135BQ49AJ0 1406 aa17.63■□□□□ 0.41
SCN8A-215ENST00000638820 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
SCN8A-215ENST00000638820 NEFMP07197 916 aa17.62■□□□□ 0.41
SCN8A-215ENST00000638820 NME9Q86XW9 330 aa17.62■□□□□ 0.41
SCN8A-215ENST00000638820 SUPT16HQ9Y5B9 1047 aaKnown RBP17.62■□□□□ 0.41
SCN8A-215ENST00000638820 FKBP8Q14318 412 aa17.61■□□□□ 0.41
SCN8A-215ENST00000638820 SLIT1O75093 1534 aa17.61■□□□□ 0.41
SCN8A-215ENST00000638820 ARHGAP23Q9P227 1491 aa17.61■□□□□ 0.41
SCN8A-215ENST00000638820 NPC1L1Q9UHC9 1359 aa17.61■□□□□ 0.41
SCN8A-215ENST00000638820 ACEP12821 1306 aa17.61■□□□□ 0.41
SCN8A-215ENST00000638820 ESCO1Q5FWF5 840 aa17.6■□□□□ 0.41
SCN8A-215ENST00000638820 NPHP4O75161 1426 aaPredicted RBP17.6■□□□□ 0.41
SCN8A-215ENST00000638820 ZBTB7CA1YPR0 619 aa17.59■□□□□ 0.41
SCN8A-215ENST00000638820 FBLN1P23142 703 aa17.59■□□□□ 0.41
SCN8A-215ENST00000638820 ADAMTSL3P82987 1691 aa17.59■□□□□ 0.41
SCN8A-215ENST00000638820 PTPRUQ92729 1446 aa17.59■□□□□ 0.41
SCN8A-215ENST00000638820 DLC1Q96QB1 1528 aa17.59■□□□□ 0.41
SCN8A-215ENST00000638820 IRX6P78412 446 aaPredicted RBP17.58■□□□□ 0.41
SCN8A-215ENST00000638820 PRR36Q9H6K5 1346 aa17.58■□□□□ 0.4
SCN8A-215ENST00000638820 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.4
SCN8A-215ENST00000638820 NSD2O96028 1365 aa17.56■□□□□ 0.4
SCN8A-215ENST00000638820 APAF1O14727 1248 aa17.56■□□□□ 0.4
SCN8A-215ENST00000638820 ZRANB1Q9UGI0 708 aa17.56■□□□□ 0.4
SCN8A-215ENST00000638820 NRXN3Q9Y4C0 1643 aa17.56■□□□□ 0.4
SCN8A-215ENST00000638820 TECPR2O15040 1411 aa17.56■□□□□ 0.4
SCN8A-215ENST00000638820 PSME1Q06323 249 aa17.56■□□□□ 0.4
SCN8A-215ENST00000638820 ATF3P18847 181 aa17.55■□□□□ 0.4
SCN8A-215ENST00000638820 PIK3R4Q99570 1358 aa17.55■□□□□ 0.4
SCN8A-215ENST00000638820 KDM4FA0A1W2PPD8 638 aa17.54■□□□□ 0.4
SCN8A-215ENST00000638820 NLRP6P59044 892 aa17.54■□□□□ 0.4
SCN8A-215ENST00000638820 MAPK8IP3Q9UPT6 1336 aa17.54■□□□□ 0.4
SCN8A-215ENST00000638820 RRP7AQ9Y3A4 280 aaKnown RBP17.53■□□□□ 0.4
SCN8A-215ENST00000638820 MYOM1P52179 1685 aa17.53■□□□□ 0.4
SCN8A-215ENST00000638820 RRS1Q15050 365 aaKnown RBP17.53■□□□□ 0.4
SCN8A-215ENST00000638820 DIAPH1O60610 1272 aaKnown RBP17.53■□□□□ 0.4
SCN8A-215ENST00000638820 PHF8Q9UPP1 1060 aa17.53■□□□□ 0.4
SCN8A-215ENST00000638820 XPCQ01831 940 aaPredicted RBP17.52■□□□□ 0.39
SCN8A-215ENST00000638820 ABTB2Q8N961 1025 aa17.52■□□□□ 0.39
SCN8A-215ENST00000638820 TTC21BQ7Z4L5 1316 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms