RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 MAP7D2Q96T17 732 aa22.33■■□□□ 1.17
SCARB2-213ENST00000638680 KIF21BO75037 1637 aa22.33■■□□□ 1.17
SCARB2-213ENST00000638680 HSP90AB4PQ58FF6 505 aa22.33■■□□□ 1.17
SCARB2-213ENST00000638680 PRPF40AO75400 957 aaKnown RBP22.33■■□□□ 1.16
SCARB2-213ENST00000638680 DDX58O95786 925 aaKnown RBP22.33■■□□□ 1.16
SCARB2-213ENST00000638680 CCDC27Q2M243 656 aa22.32■■□□□ 1.16
SCARB2-213ENST00000638680 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.32■■□□□ 1.16
SCARB2-213ENST00000638680 ZNF644Q9H582 1327 aaPredicted RBP22.32■■□□□ 1.16
SCARB2-213ENST00000638680 CUX1P39880 1505 aa22.32■■□□□ 1.16
SCARB2-213ENST00000638680 TSPY26PQ9H489 355 aa22.32■■□□□ 1.16
SCARB2-213ENST00000638680 CCDC173Q0VFZ6 552 aa22.31■■□□□ 1.16
SCARB2-213ENST00000638680 GGNBP2Q9H3C7 697 aa22.31■■□□□ 1.16
SCARB2-213ENST00000638680 BACH2Q9BYV9 841 aa22.3■■□□□ 1.16
SCARB2-213ENST00000638680 NAT10Q9H0A0 1025 aaKnown RBP22.29■■□□□ 1.16
SCARB2-213ENST00000638680 LETM1O95202 739 aaPredicted RBP22.29■■□□□ 1.16
SCARB2-213ENST00000638680 LRRC9Q6ZRR7 1453 aa22.29■■□□□ 1.16
SCARB2-213ENST00000638680 MBD3O95983 291 aa22.29■■□□□ 1.16
SCARB2-213ENST00000638680 RBM10P98175 930 aaKnown RBP22.29■■□□□ 1.16
SCARB2-213ENST00000638680 TCP11L2Q8N4U5 519 aa22.29■■□□□ 1.16
SCARB2-213ENST00000638680 RUFY1Q96T51 708 aa22.28■■□□□ 1.16
SCARB2-213ENST00000638680 PPP2R1AP30153 589 aa22.28■■□□□ 1.16
SCARB2-213ENST00000638680 TRIM5Q9C035 493 aa22.28■■□□□ 1.16
SCARB2-213ENST00000638680 ACBD3Q9H3P7 528 aa22.27■■□□□ 1.16
SCARB2-213ENST00000638680 AK7Q96M32 723 aa22.27■■□□□ 1.16
SCARB2-213ENST00000638680 SMARCA4P51532 1647 aa22.27■■□□□ 1.16
SCARB2-213ENST00000638680 NINLQ9Y2I6 1382 aa22.27■■□□□ 1.16
SCARB2-213ENST00000638680 PDILTQ8N807 584 aa22.27■■□□□ 1.16
SCARB2-213ENST00000638680 NEK4P51957 841 aa22.27■■□□□ 1.16
SCARB2-213ENST00000638680 UBTFL1P0CB47 393 aaPredicted RBP22.26■■□□□ 1.15
SCARB2-213ENST00000638680 HSP90B2PQ58FF3 399 aa22.26■■□□□ 1.15
SCARB2-213ENST00000638680 AMOTL1Q8IY63 956 aa22.26■■□□□ 1.15
SCARB2-213ENST00000638680 ATAD2BQ9ULI0 1458 aa22.26■■□□□ 1.15
SCARB2-213ENST00000638680 ERICH2A1L162 156 aa22.26■■□□□ 1.15
SCARB2-213ENST00000638680 NOM1Q5C9Z4 860 aaKnown RBP22.26■■□□□ 1.15
SCARB2-213ENST00000638680 OLFM4Q6UX06 510 aa22.26■■□□□ 1.15
SCARB2-213ENST00000638680 MTHFSP49914 203 aa22.25■■□□□ 1.15
SCARB2-213ENST00000638680 SDF4Q9BRK5 362 aa22.25■■□□□ 1.15
SCARB2-213ENST00000638680 RAD21O60216 631 aa22.25■■□□□ 1.15
SCARB2-213ENST00000638680 RABEP1Q15276 862 aa22.25■■□□□ 1.15
SCARB2-213ENST00000638680 SAFBQ15424 915 aaKnown RBP eCLIP22.25■■□□□ 1.15
SCARB2-213ENST00000638680 CNTROBQ8N137 903 aa22.25■■□□□ 1.15
SCARB2-213ENST00000638680 WWC1Q8IX03 1113 aa22.25■■□□□ 1.15
SCARB2-213ENST00000638680 BCAR3O75815 825 aa22.25■■□□□ 1.15
SCARB2-213ENST00000638680 PSMA5P28066 241 aa22.25■■□□□ 1.15
SCARB2-213ENST00000638680 C1orf115Q9H7X2 142 aa22.25■■□□□ 1.15
SCARB2-213ENST00000638680 CABP2Q9NPB3 220 aa22.25■■□□□ 1.15
SCARB2-213ENST00000638680 NAP1L1P55209 391 aaKnown RBP22.24■■□□□ 1.15
SCARB2-213ENST00000638680 PTPRGP23470 1445 aa22.24■■□□□ 1.15
SCARB2-213ENST00000638680 EXOSC9Q06265 439 aaKnown RBP22.24■■□□□ 1.15
SCARB2-213ENST00000638680 NOL10Q9BSC4 688 aaKnown RBP22.23■■□□□ 1.15
SCARB2-213ENST00000638680 NEUROD6Q96NK8 337 aa22.23■■□□□ 1.15
SCARB2-213ENST00000638680 DHX16O60231 1041 aaKnown RBP22.23■■□□□ 1.15
SCARB2-213ENST00000638680 PDE3AQ14432 1141 aa22.23■■□□□ 1.15
SCARB2-213ENST00000638680 RALYLQ86SE5 291 aaKnown RBP22.22■■□□□ 1.15
SCARB2-213ENST00000638680 WASHC4Q2M389 1173 aa22.21■■□□□ 1.15
SCARB2-213ENST00000638680 IGF1RP08069 1367 aa22.2■■□□□ 1.15
SCARB2-213ENST00000638680 AIMP1Q12904 312 aaKnown RBP22.2■■□□□ 1.14
SCARB2-213ENST00000638680 GRPEL1Q9HAV7 217 aa22.2■■□□□ 1.14
SCARB2-213ENST00000638680 NOB1Q9ULX3 412 aaKnown RBP22.2■■□□□ 1.14
SCARB2-213ENST00000638680 FSD1Q9BTV5 496 aa22.2■■□□□ 1.14
SCARB2-213ENST00000638680 ANKRD50Q9ULJ7 1429 aa22.2■■□□□ 1.14
SCARB2-213ENST00000638680 SMC2O95347 1197 aa22.2■■□□□ 1.14
SCARB2-213ENST00000638680 MCM2P49736 904 aa22.2■■□□□ 1.14
SCARB2-213ENST00000638680 RIC3Q7Z5B4 369 aa22.19■■□□□ 1.14
SCARB2-213ENST00000638680 SPC24Q8NBT2 197 aa22.19■■□□□ 1.14
SCARB2-213ENST00000638680 FANCD2Q9BXW9 1451 aa22.19■■□□□ 1.14
SCARB2-213ENST00000638680 FIBPO43427 364 aa22.19■■□□□ 1.14
SCARB2-213ENST00000638680 GCC1Q96CN9 775 aa22.19■■□□□ 1.14
SCARB2-213ENST00000638680 EVA1CP58658 441 aa22.19■■□□□ 1.14
SCARB2-213ENST00000638680 VPS37DQ86XT2 251 aa22.19■■□□□ 1.14
SCARB2-213ENST00000638680 SMG6Q86US8 1419 aaKnown RBP22.18■■□□□ 1.14
SCARB2-213ENST00000638680 KDM4AO75164 1064 aa22.18■■□□□ 1.14
SCARB2-213ENST00000638680 HMGN5P82970 282 aaKnown RBP22.18■■□□□ 1.14
SCARB2-213ENST00000638680 STAC3Q96MF2 364 aa22.18■■□□□ 1.14
SCARB2-213ENST00000638680 NCOA2Q15596 1464 aa22.18■■□□□ 1.14
SCARB2-213ENST00000638680 TTLL5Q6EMB2 1281 aa22.18■■□□□ 1.14
SCARB2-213ENST00000638680 SURF6O75683 361 aaKnown RBP22.17■■□□□ 1.14
SCARB2-213ENST00000638680 KINO60870 393 aaKnown RBP22.16■■□□□ 1.14
SCARB2-213ENST00000638680 TMEM132EQ6IEE7 984 aa22.16■■□□□ 1.14
SCARB2-213ENST00000638680 CDR1P51861 262 aa22.16■■□□□ 1.14
SCARB2-213ENST00000638680 TCEAL9Q9UHQ7 104 aa22.16■■□□□ 1.14
SCARB2-213ENST00000638680 CAGE1Q8TC20 777 aa22.16■■□□□ 1.14
SCARB2-213ENST00000638680 TSR2Q969E8 191 aaKnown RBP22.16■■□□□ 1.14
SCARB2-213ENST00000638680 K7ELQ4 463 aaPredicted RBP22.15■■□□□ 1.14
SCARB2-213ENST00000638680 GNAI3P08754 354 aa22.15■■□□□ 1.14
SCARB2-213ENST00000638680 CWC15Q9P013 229 aaKnown RBP22.15■■□□□ 1.14
SCARB2-213ENST00000638680 FMNL2Q96PY5 1086 aa22.15■■□□□ 1.14
SCARB2-213ENST00000638680 CLASRPQ8N2M8 674 aaKnown RBP22.14■■□□□ 1.14
SCARB2-213ENST00000638680 FYCO1Q9BQS8 1478 aa22.14■■□□□ 1.14
SCARB2-213ENST00000638680 CCDC66A2RUB6 948 aa22.14■■□□□ 1.14
SCARB2-213ENST00000638680 PNISRQ8TF01 805 aaKnown RBP22.14■■□□□ 1.14
SCARB2-213ENST00000638680 CWC22Q9HCG8 908 aaKnown RBP22.14■■□□□ 1.14
SCARB2-213ENST00000638680 PSME1Q06323 249 aa22.14■■□□□ 1.13
SCARB2-213ENST00000638680 MPNDQ8N594 471 aa22.14■■□□□ 1.13
SCARB2-213ENST00000638680 TRIM34Q9BYJ4 488 aa22.14■■□□□ 1.13
SCARB2-213ENST00000638680 TWISTNBQ3B726 338 aaPredicted RBP22.13■■□□□ 1.13
SCARB2-213ENST00000638680 PKNOX2Q96KN3 472 aa22.13■■□□□ 1.13
SCARB2-213ENST00000638680 RRBP1Q9P2E9 1410 aaKnown RBP22.13■■□□□ 1.13
SCARB2-213ENST00000638680 PRKAR2BP31323 418 aa22.13■■□□□ 1.13
SCARB2-213ENST00000638680 CEBPZQ03701 1054 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms