RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 RAD21O60216 631 aa21.64■■□□□ 1.06
CACNA1A-247ENST00000637769 MAGEC2Q9UBF1 373 aaPredicted RBP21.64■■□□□ 1.05
CACNA1A-247ENST00000637769 KINO60870 393 aaKnown RBP21.64■■□□□ 1.05
CACNA1A-247ENST00000637769 TAF3Q5VWG9 929 aa21.64■■□□□ 1.05
CACNA1A-247ENST00000637769 ZNHIT6Q9NWK9 470 aaKnown RBP21.64■■□□□ 1.05
CACNA1A-247ENST00000637769 API5Q9BZZ5 524 aaKnown RBP21.63■■□□□ 1.05
CACNA1A-247ENST00000637769 DESP17661 470 aa21.63■■□□□ 1.05
CACNA1A-247ENST00000637769 EIF3JO75822 258 aaKnown RBP21.62■■□□□ 1.05
CACNA1A-247ENST00000637769 FANCIQ9NVI1 1328 aa21.62■■□□□ 1.05
CACNA1A-247ENST00000637769 SLC3A2P08195 630 aaKnown RBP21.62■■□□□ 1.05
CACNA1A-247ENST00000637769 EVA1CP58658 441 aa21.62■■□□□ 1.05
CACNA1A-247ENST00000637769 CT47B1P0C2W7 299 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-247ENST00000637769 HIP1O00291 1037 aa21.61■■□□□ 1.05
CACNA1A-247ENST00000637769 SDF4Q9BRK5 362 aa21.61■■□□□ 1.05
CACNA1A-247ENST00000637769 MRE11P49959 708 aa21.6■■□□□ 1.05
CACNA1A-247ENST00000637769 GBP2P32456 591 aaPredicted RBP21.6■■□□□ 1.05
CACNA1A-247ENST00000637769 TSPYL1Q9H0U9 437 aa21.6■■□□□ 1.05
CACNA1A-247ENST00000637769 JMYQ8N9B5 988 aa21.6■■□□□ 1.05
CACNA1A-247ENST00000637769 VPS37CA5D8V6 355 aaPredicted RBP21.6■■□□□ 1.05
CACNA1A-247ENST00000637769 NEFHP12036 1026 aa21.59■■□□□ 1.05
CACNA1A-247ENST00000637769 CCAR1Q8IX12 1150 aaKnown RBP21.59■■□□□ 1.05
CACNA1A-247ENST00000637769 FOXD4L6Q3SYB3 417 aaPredicted RBP21.59■■□□□ 1.05
CACNA1A-247ENST00000637769 FOXD4L3Q6VB84 417 aaPredicted RBP21.59■■□□□ 1.05
CACNA1A-247ENST00000637769 STIM1Q13586 685 aa21.59■■□□□ 1.05
CACNA1A-247ENST00000637769 DYDC1Q8WWB3 177 aa21.58■■□□□ 1.05
CACNA1A-247ENST00000637769 RRP1P56182 461 aaKnown RBP21.58■■□□□ 1.05
CACNA1A-247ENST00000637769 AXDND1Q5T1B0 1012 aaPredicted RBP21.58■■□□□ 1.05
CACNA1A-247ENST00000637769 CCDC146Q8IYE0 955 aa21.58■■□□□ 1.05
CACNA1A-247ENST00000637769 PAF1Q8N7H5 531 aa21.58■■□□□ 1.04
CACNA1A-247ENST00000637769 MIA2Q96PC5 1412 aa21.58■■□□□ 1.04
CACNA1A-247ENST00000637769 TRIM21P19474 475 aaKnown RBP21.58■■□□□ 1.04
CACNA1A-247ENST00000637769 PDIA4P13667 645 aaKnown RBP21.57■■□□□ 1.04
CACNA1A-247ENST00000637769 CDK5RAP3Q96JB5 506 aa21.57■■□□□ 1.04
CACNA1A-247ENST00000637769 WASHC2CQ9Y4E1 1318 aa21.57■■□□□ 1.04
CACNA1A-247ENST00000637769 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.57■■□□□ 1.04
CACNA1A-247ENST00000637769 ERLIN1O75477 346 aa21.56■■□□□ 1.04
CACNA1A-247ENST00000637769 STK11IPQ8N1F8 1099 aa21.56■■□□□ 1.04
CACNA1A-247ENST00000637769 TSHZ2Q9NRE2 1034 aa21.56■■□□□ 1.04
CACNA1A-247ENST00000637769 DACH1Q9UI36 760 aa21.56■■□□□ 1.04
CACNA1A-247ENST00000637769 PDILTQ8N807 584 aa21.55■■□□□ 1.04
CACNA1A-247ENST00000637769 RBM33Q96EV2 1170 aaKnown RBP21.55■■□□□ 1.04
CACNA1A-247ENST00000637769 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
CACNA1A-247ENST00000637769 ENOX2Q16206 610 aaKnown RBP21.54■■□□□ 1.04
CACNA1A-247ENST00000637769 ZNF396Q96N95 335 aaPredicted RBP21.54■■□□□ 1.04
CACNA1A-247ENST00000637769 FEZ1Q99689 392 aa21.53■■□□□ 1.04
CACNA1A-247ENST00000637769 TRIM5Q9C035 493 aa21.52■■□□□ 1.04
CACNA1A-247ENST00000637769 CNTROBQ8N137 903 aa21.52■■□□□ 1.04
CACNA1A-247ENST00000637769 DNAI2Q9GZS0 605 aa21.52■■□□□ 1.04
CACNA1A-247ENST00000637769 DZIP1LQ8IYY4 767 aaKnown RBP21.51■■□□□ 1.03
CACNA1A-247ENST00000637769 VGFO15240 615 aaPredicted RBP21.5■■□□□ 1.03
CACNA1A-247ENST00000637769 LTV1Q96GA3 475 aaPredicted RBP21.5■■□□□ 1.03
CACNA1A-247ENST00000637769 DEF6Q9H4E7 631 aa21.48■■□□□ 1.03
CACNA1A-247ENST00000637769 TBC1D2BQ9UPU7 963 aa21.48■■□□□ 1.03
CACNA1A-247ENST00000637769 CUX1P39880 1505 aa21.48■■□□□ 1.03
CACNA1A-247ENST00000637769 PDS5BQ9NTI5 1447 aa21.48■■□□□ 1.03
CACNA1A-247ENST00000637769 HSP90AB3PQ58FF7 597 aa21.48■■□□□ 1.03
CACNA1A-247ENST00000637769 SLC26A8Q96RN1 970 aa21.47■■□□□ 1.03
CACNA1A-247ENST00000637769 ANKRD1Q15327 319 aa21.47■■□□□ 1.03
CACNA1A-247ENST00000637769 TMEM132AQ24JP5 1023 aa21.47■■□□□ 1.03
CACNA1A-247ENST00000637769 C22orf23Q9BZE7 217 aa21.46■■□□□ 1.03
CACNA1A-247ENST00000637769 CCDC91Q7Z6B0 441 aa21.46■■□□□ 1.03
CACNA1A-247ENST00000637769 CCDC181Q5TID7 509 aa21.46■■□□□ 1.03
CACNA1A-247ENST00000637769 SMC2O95347 1197 aa21.46■■□□□ 1.03
CACNA1A-247ENST00000637769 KIF3BO15066 747 aa21.45■■□□□ 1.02
CACNA1A-247ENST00000637769 CLASRPQ8N2M8 674 aaKnown RBP21.44■■□□□ 1.02
CACNA1A-247ENST00000637769 GNAI1P63096 354 aa21.44■■□□□ 1.02
CACNA1A-247ENST00000637769 CBFA2T2O43439 604 aa21.44■■□□□ 1.02
CACNA1A-247ENST00000637769 FKBP5Q13451 457 aaPredicted RBP21.44■■□□□ 1.02
CACNA1A-247ENST00000637769 PPFIBP1Q86W92 1011 aa21.44■■□□□ 1.02
CACNA1A-247ENST00000637769 TSPY26PQ9H489 355 aa21.44■■□□□ 1.02
CACNA1A-247ENST00000637769 CCDC192P0DO97 292 aa21.43■■□□□ 1.02
CACNA1A-247ENST00000637769 SCAPERQ9BY12 1400 aa21.43■■□□□ 1.02
CACNA1A-247ENST00000637769 CDC45O75419 566 aa21.43■■□□□ 1.02
CACNA1A-247ENST00000637769 USP47Q96K76 1375 aa21.43■■□□□ 1.02
CACNA1A-247ENST00000637769 PLCD4Q9BRC7 762 aa21.43■■□□□ 1.02
CACNA1A-247ENST00000637769 STAC3Q96MF2 364 aa21.42■■□□□ 1.02
CACNA1A-247ENST00000637769 MCM3P25205 808 aa21.42■■□□□ 1.02
CACNA1A-247ENST00000637769 ERC1Q8IUD2 1116 aa21.42■■□□□ 1.02
CACNA1A-247ENST00000637769 MSH5O43196 834 aa21.41■■□□□ 1.02
CACNA1A-247ENST00000637769 FOXD1Q16676 465 aa21.41■■□□□ 1.02
CACNA1A-247ENST00000637769 IKQ13123 557 aaPredicted RBP21.41■■□□□ 1.02
CACNA1A-247ENST00000637769 ANKRD62A6NC57 917 aa21.41■■□□□ 1.02
CACNA1A-247ENST00000637769 KRT18P05783 430 aaKnown RBP21.41■■□□□ 1.02
CACNA1A-247ENST00000637769 DCAF8L1A6NGE4 600 aa21.4■■□□□ 1.02
CACNA1A-247ENST00000637769 PPM1EQ8WY54 764 aa21.4■■□□□ 1.02
CACNA1A-247ENST00000637769 STAMBPO95630 424 aa21.4■■□□□ 1.02
CACNA1A-247ENST00000637769 HMGB2P26583 209 aaKnown RBP21.39■■□□□ 1.02
CACNA1A-247ENST00000637769 FBXW7Q969H0 707 aa21.39■■□□□ 1.02
CACNA1A-247ENST00000637769 PDCL2Q8N4E4 241 aa21.39■■□□□ 1.01
CACNA1A-247ENST00000637769 LRRCC1Q9C099 1032 aa21.39■■□□□ 1.01
CACNA1A-247ENST00000637769 DIAPH1O60610 1272 aaKnown RBP21.39■■□□□ 1.01
CACNA1A-247ENST00000637769 PANK3Q9H999 370 aa21.38■■□□□ 1.01
CACNA1A-247ENST00000637769 RUNDC1Q96C34 613 aa21.38■■□□□ 1.01
CACNA1A-247ENST00000637769 AEBP1Q8IUX7 1158 aa21.38■■□□□ 1.01
CACNA1A-247ENST00000637769 TRIM22Q8IYM9 498 aa21.38■■□□□ 1.01
CACNA1A-247ENST00000637769 CRBNQ96SW2 442 aa21.38■■□□□ 1.01
CACNA1A-247ENST00000637769 GNL3LQ9NVN8 582 aaKnown RBP21.38■■□□□ 1.01
CACNA1A-247ENST00000637769 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.38■■□□□ 1.01
CACNA1A-247ENST00000637769 KIF2AO00139 706 aaPredicted RBP21.37■■□□□ 1.01
CACNA1A-247ENST00000637769 TTLL5Q6EMB2 1281 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms