RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 ALKQ9UM73 1620 aa20.41■□□□□ 0.86
SCN8A-214ENST00000637709 PLEKHH1Q9ULM0 1364 aa20.41■□□□□ 0.86
SCN8A-214ENST00000637709 PLIN1O60240 522 aa20.41■□□□□ 0.86
SCN8A-214ENST00000637709 PTPRMP28827 1452 aa20.4■□□□□ 0.86
SCN8A-214ENST00000637709 SLC24A1O60721 1099 aa20.39■□□□□ 0.86
SCN8A-214ENST00000637709 RIMS2Q9UQ26 1411 aa20.39■□□□□ 0.85
SCN8A-214ENST00000637709 RCAN3Q9UKA8 241 aa20.38■□□□□ 0.85
SCN8A-214ENST00000637709 APAF1O14727 1248 aa20.38■□□□□ 0.85
SCN8A-214ENST00000637709 ZFYVE9O95405 1425 aa20.38■□□□□ 0.85
SCN8A-214ENST00000637709 SPATA31D1Q6ZQQ2 1576 aa20.38■□□□□ 0.85
SCN8A-214ENST00000637709 GGNBP2Q9H3C7 697 aa20.36■□□□□ 0.85
SCN8A-214ENST00000637709 NPC1L1Q9UHC9 1359 aa20.36■□□□□ 0.85
SCN8A-214ENST00000637709 NEUROD2Q15784 382 aa20.36■□□□□ 0.85
SCN8A-214ENST00000637709 A0A1W2PP64 1363 aa20.35■□□□□ 0.85
SCN8A-214ENST00000637709 TXNDC2Q86VQ3 553 aa20.34■□□□□ 0.85
SCN8A-214ENST00000637709 CDK19Q9BWU1 502 aa20.34■□□□□ 0.85
SCN8A-214ENST00000637709 MTHFSP49914 203 aa20.34■□□□□ 0.85
SCN8A-214ENST00000637709 RRP7AQ9Y3A4 280 aaKnown RBP20.34■□□□□ 0.85
SCN8A-214ENST00000637709 FBLN1P23142 703 aa20.33■□□□□ 0.85
SCN8A-214ENST00000637709 CGNL1Q0VF96 1302 aa20.33■□□□□ 0.84
SCN8A-214ENST00000637709 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.84
SCN8A-214ENST00000637709 RRP1P56182 461 aaKnown RBP20.33■□□□□ 0.84
SCN8A-214ENST00000637709 SPINK5Q9NQ38 1064 aaPredicted RBP20.33■□□□□ 0.84
SCN8A-214ENST00000637709 PPP6R1Q9UPN7 881 aa20.33■□□□□ 0.84
SCN8A-214ENST00000637709 DMRT2Q9Y5R5 561 aa20.33■□□□□ 0.84
SCN8A-214ENST00000637709 NCKAP5LQ9HCH0 1330 aa20.32■□□□□ 0.84
SCN8A-214ENST00000637709 CABP1Q9NZU7 370 aa20.32■□□□□ 0.84
SCN8A-214ENST00000637709 METP08581 1390 aa20.32■□□□□ 0.84
SCN8A-214ENST00000637709 EXOC6Q8TAG9 804 aa20.31■□□□□ 0.84
SCN8A-214ENST00000637709 ANKRD36BQ8N2N9 1353 aa20.31■□□□□ 0.84
SCN8A-214ENST00000637709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.3■□□□□ 0.84
SCN8A-214ENST00000637709 TNRQ92752 1358 aa20.29■□□□□ 0.84
SCN8A-214ENST00000637709 PDE3BQ13370 1112 aa20.29■□□□□ 0.84
SCN8A-214ENST00000637709 CCDC136Q96JN2 1154 aa20.29■□□□□ 0.84
SCN8A-214ENST00000637709 NUTM2FA1L443 756 aa20.28■□□□□ 0.84
SCN8A-214ENST00000637709 NRXN3Q9Y4C0 1643 aa20.27■□□□□ 0.84
SCN8A-214ENST00000637709 SETD1AO15047 1707 aaKnown RBP20.26■□□□□ 0.83
SCN8A-214ENST00000637709 C20orf194Q5TEA3 1177 aa20.26■□□□□ 0.83
SCN8A-214ENST00000637709 RBM19Q9Y4C8 960 aaKnown RBP20.26■□□□□ 0.83
SCN8A-214ENST00000637709 ERICH6BQ5W0A0 696 aa20.25■□□□□ 0.83
SCN8A-214ENST00000637709 SHPRHQ149N8 1683 aa20.25■□□□□ 0.83
SCN8A-214ENST00000637709 LTKP29376 864 aa20.25■□□□□ 0.83
SCN8A-214ENST00000637709 DUSP27Q5VZP5 1158 aa20.25■□□□□ 0.83
SCN8A-214ENST00000637709 SLC26A8Q96RN1 970 aa20.25■□□□□ 0.83
SCN8A-214ENST00000637709 GOLGA2Q08379 1002 aa20.24■□□□□ 0.83
SCN8A-214ENST00000637709 CD163L1Q9NR16 1453 aa20.24■□□□□ 0.83
SCN8A-214ENST00000637709 FYB1O15117 783 aa20.24■□□□□ 0.83
SCN8A-214ENST00000637709 ZNF521Q96K83 1311 aa20.23■□□□□ 0.83
SCN8A-214ENST00000637709 PPM1GO15355 546 aaPredicted RBP20.22■□□□□ 0.83
SCN8A-214ENST00000637709 POLR3AO14802 1390 aaPredicted RBP20.22■□□□□ 0.83
SCN8A-214ENST00000637709 UBR1Q8IWV7 1749 aa20.21■□□□□ 0.83
SCN8A-214ENST00000637709 U2AF1L5P0DN76 240 aaPredicted RBP20.2■□□□□ 0.82
SCN8A-214ENST00000637709 U2AF1Q01081 240 aaKnown RBP eCLIP20.2■□□□□ 0.82
SCN8A-214ENST00000637709 TERF2IPQ9NYB0 399 aa20.2■□□□□ 0.82
SCN8A-214ENST00000637709 ATAD2Q6PL18 1390 aa20.2■□□□□ 0.82
SCN8A-214ENST00000637709 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
SCN8A-214ENST00000637709 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
SCN8A-214ENST00000637709 INSRP06213 1382 aa20.19■□□□□ 0.82
SCN8A-214ENST00000637709 ABCC11Q96J66 1382 aa20.19■□□□□ 0.82
SCN8A-214ENST00000637709 TMEM2Q9UHN6 1383 aa20.19■□□□□ 0.82
SCN8A-214ENST00000637709 SLFN5Q08AF3 891 aa20.18■□□□□ 0.82
SCN8A-214ENST00000637709 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
SCN8A-214ENST00000637709 CRBNQ96SW2 442 aa20.18■□□□□ 0.82
SCN8A-214ENST00000637709 USP32Q8NFA0 1604 aa20.18■□□□□ 0.82
SCN8A-214ENST00000637709 SKAP1Q86WV1 359 aa20.17■□□□□ 0.82
SCN8A-214ENST00000637709 TCP11L2Q8N4U5 519 aa20.17■□□□□ 0.82
SCN8A-214ENST00000637709 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.17■□□□□ 0.82
SCN8A-214ENST00000637709 PUS7Q96PZ0 661 aaKnown RBP20.16■□□□□ 0.82
SCN8A-214ENST00000637709 WWC1Q8IX03 1113 aa20.15■□□□□ 0.82
SCN8A-214ENST00000637709 CFAP53Q96M91 514 aa20.15■□□□□ 0.82
SCN8A-214ENST00000637709 WASLO00401 505 aaPredicted RBP20.15■□□□□ 0.82
SCN8A-214ENST00000637709 BCAR3O75815 825 aa20.15■□□□□ 0.82
SCN8A-214ENST00000637709 ROBO2Q9HCK4 1378 aa20.14■□□□□ 0.82
SCN8A-214ENST00000637709 C3P01024 1663 aa20.14■□□□□ 0.82
SCN8A-214ENST00000637709 NME9Q86XW9 330 aa20.13■□□□□ 0.81
SCN8A-214ENST00000637709 PPIP5K1Q6PFW1 1433 aa20.12■□□□□ 0.81
SCN8A-214ENST00000637709 NLRP1Q9C000 1473 aa20.12■□□□□ 0.81
SCN8A-214ENST00000637709 NUDT16Q96DE0 195 aaKnown RBP20.12■□□□□ 0.81
SCN8A-214ENST00000637709 FER1L4A9Z1Z3 1794 aa20.12■□□□□ 0.81
SCN8A-214ENST00000637709 RUNDC1Q96C34 613 aa20.12■□□□□ 0.81
SCN8A-214ENST00000637709 ADAMTS13Q76LX8 1427 aa20.1■□□□□ 0.81
SCN8A-214ENST00000637709 NSD2O96028 1365 aa20.1■□□□□ 0.81
SCN8A-214ENST00000637709 NINLQ9Y2I6 1382 aa20.1■□□□□ 0.81
SCN8A-214ENST00000637709 HDGFP51858 240 aaKnown RBP20.1■□□□□ 0.81
SCN8A-214ENST00000637709 DLC1Q96QB1 1528 aa20.09■□□□□ 0.81
SCN8A-214ENST00000637709 PRR36Q9H6K5 1346 aa20.09■□□□□ 0.81
SCN8A-214ENST00000637709 KIF20BQ96Q89 1820 aa20.09■□□□□ 0.81
SCN8A-214ENST00000637709 BCL2L13Q9BXK5 485 aa20.08■□□□□ 0.8
SCN8A-214ENST00000637709 EMILIN1Q9Y6C2 1016 aa20.08■□□□□ 0.8
SCN8A-214ENST00000637709 SOX12O15370 315 aa20.07■□□□□ 0.8
SCN8A-214ENST00000637709 TRMT2AQ8IZ69 625 aaKnown RBP20.07■□□□□ 0.8
SCN8A-214ENST00000637709 RBM33Q96EV2 1170 aaKnown RBP20.07■□□□□ 0.8
SCN8A-214ENST00000637709 E9PSI1 815 aa20.06■□□□□ 0.8
SCN8A-214ENST00000637709 RRS1Q15050 365 aaKnown RBP20.06■□□□□ 0.8
SCN8A-214ENST00000637709 MAP2P11137 1827 aaKnown RBP20.06■□□□□ 0.8
SCN8A-214ENST00000637709 NKTRP30414 1462 aaKnown RBP20.05■□□□□ 0.8
SCN8A-214ENST00000637709 ANKRD26Q9UPS8 1709 aa20.05■□□□□ 0.8
SCN8A-214ENST00000637709 PTPRUQ92729 1446 aa20.05■□□□□ 0.8
SCN8A-214ENST00000637709 EID1Q9Y6B2 187 aa20.05■□□□□ 0.8
SCN8A-214ENST00000637709 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms