RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 NSD3Q9BZ95 1437 aa25.66■■□□□ 1.7
CACNA1A-243ENST00000637616 TSR2Q969E8 191 aaKnown RBP25.66■■□□□ 1.7
CACNA1A-243ENST00000637616 SPHKAPQ2M3C7 1700 aa25.65■■□□□ 1.7
CACNA1A-243ENST00000637616 C22orf23Q9BZE7 217 aa25.65■■□□□ 1.7
CACNA1A-243ENST00000637616 UGGT1Q9NYU2 1555 aa25.65■■□□□ 1.7
CACNA1A-243ENST00000637616 FTSJ3Q8IY81 847 aaKnown RBP25.65■■□□□ 1.7
CACNA1A-243ENST00000637616 TRPM2O94759 1503 aa25.64■■□□□ 1.7
CACNA1A-243ENST00000637616 CEP152O94986 1710 aa25.63■■□□□ 1.69
CACNA1A-243ENST00000637616 PLCH2O75038 1416 aa25.62■■□□□ 1.69
CACNA1A-243ENST00000637616 MVPQ14764 893 aaKnown RBP25.62■■□□□ 1.69
CACNA1A-243ENST00000637616 PTPRTO14522 1441 aa25.62■■□□□ 1.69
CACNA1A-243ENST00000637616 U2AF1L5P0DN76 240 aaPredicted RBP25.61■■□□□ 1.69
CACNA1A-243ENST00000637616 U2AF1Q01081 240 aaKnown RBP eCLIP25.61■■□□□ 1.69
CACNA1A-243ENST00000637616 STAC3Q96MF2 364 aa25.61■■□□□ 1.69
CACNA1A-243ENST00000637616 TMEM132EQ6IEE7 984 aa25.61■■□□□ 1.69
CACNA1A-243ENST00000637616 TRAK2O60296 914 aa25.6■■□□□ 1.69
CACNA1A-243ENST00000637616 WDR63Q8IWG1 891 aa25.6■■□□□ 1.69
CACNA1A-243ENST00000637616 SENP3Q9H4L4 574 aaPredicted RBP25.6■■□□□ 1.69
CACNA1A-243ENST00000637616 DZIP1LQ8IYY4 767 aaKnown RBP25.59■■□□□ 1.69
CACNA1A-243ENST00000637616 PHF23Q9BUL5 403 aaPredicted RBP25.59■■□□□ 1.69
CACNA1A-243ENST00000637616 ERCC6L2Q5T890 1561 aa25.58■■□□□ 1.69
CACNA1A-243ENST00000637616 ZKSCAN2Q63HK3 967 aa25.58■■□□□ 1.69
CACNA1A-243ENST00000637616 FSD2A1L4K1 749 aa25.57■■□□□ 1.68
CACNA1A-243ENST00000637616 NAP1L5Q96NT1 182 aaPredicted RBP25.57■■□□□ 1.68
CACNA1A-243ENST00000637616 ITPRIPQ8IWB1 547 aa25.57■■□□□ 1.68
CACNA1A-243ENST00000637616 SMC4Q9NTJ3 1288 aa25.57■■□□□ 1.68
CACNA1A-243ENST00000637616 CHMP5Q9NZZ3 219 aa25.56■■□□□ 1.68
CACNA1A-243ENST00000637616 MYH16Q9H6N6 1097 aa25.55■■□□□ 1.68
CACNA1A-243ENST00000637616 EXOSC9Q06265 439 aaKnown RBP25.54■■□□□ 1.68
CACNA1A-243ENST00000637616 TRIM27P14373 513 aa25.53■■□□□ 1.68
CACNA1A-243ENST00000637616 KANK1Q14678 1352 aa25.53■■□□□ 1.68
CACNA1A-243ENST00000637616 AAMPQ13685 434 aa25.52■■□□□ 1.68
CACNA1A-243ENST00000637616 NUTM2DQ5VT03 806 aaPredicted RBP25.52■■□□□ 1.68
CACNA1A-243ENST00000637616 CFAP53Q96M91 514 aa25.52■■□□□ 1.68
CACNA1A-243ENST00000637616 SLC24A1O60721 1099 aa25.51■■□□□ 1.67
CACNA1A-243ENST00000637616 SHPRHQ149N8 1683 aa25.51■■□□□ 1.67
CACNA1A-243ENST00000637616 ABCC1P33527 1531 aa25.51■■□□□ 1.67
CACNA1A-243ENST00000637616 ABCA6Q8N139 1617 aa25.51■■□□□ 1.67
CACNA1A-243ENST00000637616 U2SURPO15042 1029 aaKnown RBP25.51■■□□□ 1.67
CACNA1A-243ENST00000637616 IQSEC2Q5JU85 1478 aa25.51■■□□□ 1.67
CACNA1A-243ENST00000637616 SSH1Q8WYL5 1049 aa25.5■■□□□ 1.67
CACNA1A-243ENST00000637616 PNNQ9H307 717 aaKnown RBP25.5■■□□□ 1.67
CACNA1A-243ENST00000637616 RTEL1-TNFRSF6BF6WH68 1400 aa25.5■■□□□ 1.67
CACNA1A-243ENST00000637616 HSCBQ8IWL3 235 aa25.5■■□□□ 1.67
CACNA1A-243ENST00000637616 FOXD4L1Q9NU39 408 aa25.49■■□□□ 1.67
CACNA1A-243ENST00000637616 SAFB2Q14151 953 aaKnown RBP eCLIP25.49■■□□□ 1.67
CACNA1A-243ENST00000637616 NOB1Q9ULX3 412 aaKnown RBP25.48■■□□□ 1.67
CACNA1A-243ENST00000637616 CHD1O14646 1710 aa25.47■■□□□ 1.67
CACNA1A-243ENST00000637616 CCDC27Q2M243 656 aa25.47■■□□□ 1.67
CACNA1A-243ENST00000637616 LNPKQ9C0E8 428 aa25.46■■□□□ 1.67
CACNA1A-243ENST00000637616 NOS1P29475 1434 aa25.46■■□□□ 1.67
CACNA1A-243ENST00000637616 MAP3K4Q9Y6R4 1608 aa25.46■■□□□ 1.67
CACNA1A-243ENST00000637616 TMEM57Q8N5G2 664 aa25.45■■□□□ 1.67
CACNA1A-243ENST00000637616 ZNF692Q9BU19 519 aaPredicted RBP25.45■■□□□ 1.66
CACNA1A-243ENST00000637616 GRPEL1Q9HAV7 217 aa25.44■■□□□ 1.66
CACNA1A-243ENST00000637616 ZNF518AQ6AHZ1 1483 aa25.44■■□□□ 1.66
CACNA1A-243ENST00000637616 ZFYVE16Q7Z3T8 1539 aa25.43■■□□□ 1.66
CACNA1A-243ENST00000637616 ZMYM3Q14202 1370 aa25.43■■□□□ 1.66
CACNA1A-243ENST00000637616 MRE11P49959 708 aa25.43■■□□□ 1.66
CACNA1A-243ENST00000637616 ATF7IPQ6VMQ6 1270 aa25.42■■□□□ 1.66
CACNA1A-243ENST00000637616 CABP2Q9NPB3 220 aa25.42■■□□□ 1.66
CACNA1A-243ENST00000637616 CLCN1P35523 988 aa25.42■■□□□ 1.66
CACNA1A-243ENST00000637616 HDAC1Q13547 482 aaPredicted RBP25.41■■□□□ 1.66
CACNA1A-243ENST00000637616 DDX19BQ9UMR2 479 aa25.41■■□□□ 1.66
CACNA1A-243ENST00000637616 TNPO1Q92973 898 aaKnown RBP25.4■■□□□ 1.66
CACNA1A-243ENST00000637616 TET3O43151 1660 aa25.4■■□□□ 1.66
CACNA1A-243ENST00000637616 GAS2L3Q86XJ1 694 aa25.4■■□□□ 1.66
CACNA1A-243ENST00000637616 TRIM35Q9UPQ4 493 aa25.4■■□□□ 1.66
CACNA1A-243ENST00000637616 ERBB4Q15303 1308 aa25.4■■□□□ 1.66
CACNA1A-243ENST00000637616 GGNBP2Q9H3C7 697 aa25.39■■□□□ 1.65
CACNA1A-243ENST00000637616 KIAA1210Q9ULL0 1709 aa25.39■■□□□ 1.65
CACNA1A-243ENST00000637616 TMPOP42166 694 aaKnown RBP25.38■■□□□ 1.65
CACNA1A-243ENST00000637616 MYOM2P54296 1465 aa25.38■■□□□ 1.65
CACNA1A-243ENST00000637616 SMC5Q8IY18 1101 aa25.38■■□□□ 1.65
CACNA1A-243ENST00000637616 HSP90AB1P08238 724 aaKnown RBP25.37■■□□□ 1.65
CACNA1A-243ENST00000637616 DDX11L8A8MPP1 907 aa25.36■■□□□ 1.65
CACNA1A-243ENST00000637616 CD2BP2O95400 341 aaKnown RBP25.36■■□□□ 1.65
CACNA1A-243ENST00000637616 SBNO2Q9Y2G9 1366 aa25.36■■□□□ 1.65
CACNA1A-243ENST00000637616 ZBTB40Q9NUA8 1239 aa25.35■■□□□ 1.65
CACNA1A-243ENST00000637616 C14orf93Q9H972 538 aaKnown RBP25.35■■□□□ 1.65
CACNA1A-243ENST00000637616 RBM42Q9BTD8 480 aaKnown RBP25.35■■□□□ 1.65
CACNA1A-243ENST00000637616 C1orf115Q9H7X2 142 aa25.35■■□□□ 1.65
CACNA1A-243ENST00000637616 SHROOM2Q13796 1616 aa25.35■■□□□ 1.65
CACNA1A-243ENST00000637616 CD109Q6YHK3 1445 aa25.34■■□□□ 1.65
CACNA1A-243ENST00000637616 HSP90AA1P07900 732 aaKnown RBP25.34■■□□□ 1.65
CACNA1A-243ENST00000637616 RIPK4P57078 832 aa25.33■■□□□ 1.65
CACNA1A-243ENST00000637616 PLEKHF1Q96S99 279 aa25.33■■□□□ 1.65
CACNA1A-243ENST00000637616 ZCCHC11Q5TAX3 1644 aaKnown RBP25.33■■□□□ 1.65
CACNA1A-243ENST00000637616 ESPNB1AK53 854 aa25.33■■□□□ 1.64
CACNA1A-243ENST00000637616 DDIT3P35638 169 aa25.33■■□□□ 1.64
CACNA1A-243ENST00000637616 MROH2AA6NES4 1674 aa25.32■■□□□ 1.64
CACNA1A-243ENST00000637616 DEPDC5O75140 1603 aa25.31■■□□□ 1.64
CACNA1A-243ENST00000637616 NUCB1Q02818 461 aa25.31■■□□□ 1.64
CACNA1A-243ENST00000637616 GGT6Q6P531 493 aa25.31■■□□□ 1.64
CACNA1A-243ENST00000637616 CFAP65Q6ZU64 1925 aaKnown RBP25.31■■□□□ 1.64
CACNA1A-243ENST00000637616 RBM25P49756 843 aaKnown RBP25.31■■□□□ 1.64
CACNA1A-243ENST00000637616 ANKRD45Q5TZF3 282 aa25.31■■□□□ 1.64
CACNA1A-243ENST00000637616 CHD1LQ86WJ1 897 aa25.31■■□□□ 1.64
CACNA1A-243ENST00000637616 ATP7AQ04656 1500 aa25.3■■□□□ 1.64
CACNA1A-243ENST00000637616 STK26Q9P289 416 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms