RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	TRERF1	Q96PN7	1200 aa		2.29	□□□□□ -2.04
MECP2-222	ENST00000637533	PSMD1	Q99460	953 aa		2.29	□□□□□ -2.04
MECP2-222	ENST00000637533	SLK	Q9H2G2	1235 aa	Predicted RBP	2.29	□□□□□ -2.04
MECP2-222	ENST00000637533	ESF1	Q9H501	851 aa	Known RBP	2.29	□□□□□ -2.04
MECP2-222	ENST00000637533	ANO8	Q9HCE9	1232 aa	Predicted RBP	2.29	□□□□□ -2.04
MECP2-222	ENST00000637533	METTL5	Q9NRN9	209 aa	Known RBP	2.29	□□□□□ -2.04
MECP2-222	ENST00000637533	EMILIN3	Q9NT22	766 aa		2.29	□□□□□ -2.04
MECP2-222	ENST00000637533	CUEDC1	Q9NWM3	386 aa	Predicted RBP	2.29	□□□□□ -2.04
MECP2-222	ENST00000637533	MAGEC2	Q9UBF1	373 aa	Predicted RBP	2.29	□□□□□ -2.04
MECP2-222	ENST00000637533	BIN2	Q9UBW5	565 aa	Predicted RBP	2.29	□□□□□ -2.04
MECP2-222	ENST00000637533	GPSM3	Q9Y4H4	160 aa		2.29	□□□□□ -2.04
MECP2-222	ENST00000637533	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	PALM3	A6NDB9	673 aa	Predicted RBP	2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	LILRB3	O75022	631 aa		2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	RPLP1	P05386	114 aa	Known RBP	2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	CD44	P16070	742 aa	Known RBP	2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	PDE3B	Q13370	1112 aa		2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	MTMR2	Q13614	643 aa		2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	NFE2L2	Q16236	605 aa		2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	SLFNL1	Q499Z3	407 aa		2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	KMT5B	Q4FZB7	885 aa		2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	DESI1	Q6ICB0	168 aa		2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	SLF2	Q8IX21	1173 aa		2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	FAM177A1	Q8N128	213 aa	Predicted RBP	2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	MTMR14	Q8NCE2	650 aa		2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	TTC16	Q8NEE8	873 aa		2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	MS4A4A	Q96JQ5	239 aa		2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	BRINP2	Q9C0B6	783 aa		2.28	□□□□□ -2.04
MECP2-222	ENST00000637533	ANKRD62	A6NC57	917 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	PPP1R12A	O14974	1030 aa	Predicted RBP	2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	NDUFB5	O43674	189 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	SEC24B	O95487	1268 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	HSP90AA1	P07900	732 aa	Known RBP	2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	PCSK2	P16519	638 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	ATP2B1	P20020	1258 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	PRSS12	P56730	875 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	XPC	Q01831	940 aa	Predicted RBP	2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	NR1H3	Q13133	447 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	EML3	Q32P44	896 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	FAM161A	Q3B820	660 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	NBPF14	Q5TI25	921 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	GLYCTK	Q8IVS8	523 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	RDH13	Q8NBN7	331 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	UPF1	Q92900	1129 aa	Known RBP eCLIP	2.27	□□□□□ -2.05	7e-7	■□□□□ 11
MECP2-222	ENST00000637533	CLP1	Q92989	425 aa	Known RBP	2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	VTI1A	Q96AJ9	217 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	POM121	Q96HA1	1249 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	CCSER2	Q9H7U1	834 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	ZSWIM6	Q9HCJ5	1215 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	DCTN4	Q9UJW0	460 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	CHMP3	Q9Y3E7	222 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	MAFB	Q9Y5Q3	323 aa	Predicted RBP	2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	ADGRG1	Q9Y653	693 aa		2.27	□□□□□ -2.05
MECP2-222	ENST00000637533	ERBB3	P21860	1342 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	C2orf72	A6NCS6	295 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	SOWAHD	A6NJG2	315 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	FAM13A	O94988	1023 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	FDX1	P10109	184 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	CD46	P15529	392 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	USP5	P45974	858 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	ANAPC15	P60006	121 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	RBM10	P98175	930 aa	Known RBP	2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	PTK2	Q05397	1052 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	EAPP	Q56P03	285 aa	Predicted RBP	2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	HSP90AB2P	Q58FF8	381 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	PPP4R3B	Q5MIZ7	849 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	NBPF6	Q5VWK0	638 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	CC2D2B	Q6DHV5	1058 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	SLC43A3	Q8NBI5	491 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	GAS2L2	Q8NHY3	880 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	GIPC2	Q8TF65	315 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	SPIRE2	Q8WWL2	714 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	ZDHHC16	Q969W1	377 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	NBPF4	Q96M43	638 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	DMRTB1	Q96MA1	342 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	ALG2	Q9H553	416 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	MYH16	Q9H6N6	1097 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	SNRK	Q9NRH2	765 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	FAM13B	Q9NYF5	915 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	TFIP11	Q9UBB9	837 aa	Known RBP	2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	CDV3	Q9UKY7	258 aa	Known RBP	2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	NOVA2	Q9UNW9	492 aa	Known RBP	2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	TBC1D2B	Q9UPU7	963 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	NOD1	Q9Y239	953 aa		2.26	□□□□□ -2.05
MECP2-222	ENST00000637533	ZBBX	A8MT70	800 aa		2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	KIF3C	O14782	793 aa		2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	GIPC1	O14908	333 aa		2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	U2SURP	O15042	1029 aa	Known RBP	2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	IGSF3	O75054	1194 aa		2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	EIF3J	O75822	258 aa	Known RBP	2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	APP	P05067	770 aa		2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	ZNF16	P17020	682 aa	Predicted RBP	2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	ATP2B4	P23634	1241 aa		2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	BRD2	P25440	801 aa	Known RBP	2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	ERCC5	P28715	1186 aa	Predicted RBP	2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	FXR2	P51116	673 aa	Known RBP eCLIP	2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	IGBP1	P78318	339 aa		2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	HNRNPU	Q00839	825 aa	Known RBP eCLIP	2.25	□□□□□ -2.05
MECP2-222	ENST00000637533	HIF1A	Q16665	826 aa		2.25	□□□□□ -2.05

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