RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.38■□□□□ 0.69
CLN5-218ENST00000637397 SYNJ2O15056 1496 aa19.38■□□□□ 0.69
CLN5-218ENST00000637397 DNMBPQ6XZF7 1577 aa19.37■□□□□ 0.69
CLN5-218ENST00000637397 DUSP27Q5VZP5 1158 aa19.37■□□□□ 0.69
CLN5-218ENST00000637397 GRPEL1Q9HAV7 217 aa19.37■□□□□ 0.69
CLN5-218ENST00000637397 GORABQ5T7V8 394 aa19.37■□□□□ 0.69
CLN5-218ENST00000637397 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
CLN5-218ENST00000637397 H3BQV1 296 aa19.36■□□□□ 0.69
CLN5-218ENST00000637397 PRPF40AO75400 957 aaKnown RBP19.36■□□□□ 0.69
CLN5-218ENST00000637397 TPM4P67936 248 aa19.36■□□□□ 0.69
CLN5-218ENST00000637397 IFFO2Q5TF58 517 aa19.36■□□□□ 0.69
CLN5-218ENST00000637397 SCAPERQ9BY12 1400 aa19.36■□□□□ 0.69
CLN5-218ENST00000637397 GCC1Q96CN9 775 aa19.35■□□□□ 0.69
CLN5-218ENST00000637397 CSB-PGBD3P0DP91 1061 aa19.35■□□□□ 0.69
CLN5-218ENST00000637397 NEK4P51957 841 aa19.34■□□□□ 0.69
CLN5-218ENST00000637397 SF3A1Q15459 793 aaKnown RBP19.34■□□□□ 0.69
CLN5-218ENST00000637397 VPS37CA5D8V6 355 aaPredicted RBP19.34■□□□□ 0.69
CLN5-218ENST00000637397 ZKSCAN1P17029 563 aaPredicted RBP19.34■□□□□ 0.69
CLN5-218ENST00000637397 GOLGA6L19H0YKK7 550 aa19.34■□□□□ 0.69
CLN5-218ENST00000637397 TSPYL4Q9UJ04 414 aa19.34■□□□□ 0.69
CLN5-218ENST00000637397 CCDC9Q9Y3X0 531 aaKnown RBP19.34■□□□□ 0.69
CLN5-218ENST00000637397 TWISTNBQ3B726 338 aaPredicted RBP19.33■□□□□ 0.69
CLN5-218ENST00000637397 BECN2A8MW95 431 aa19.33■□□□□ 0.69
CLN5-218ENST00000637397 RABEP1Q15276 862 aa19.33■□□□□ 0.69
CLN5-218ENST00000637397 FAM184AQ8NB25 1140 aa19.33■□□□□ 0.69
CLN5-218ENST00000637397 RUFY2Q8WXA3 655 aa19.33■□□□□ 0.69
CLN5-218ENST00000637397 SMC3Q9UQE7 1217 aa19.33■□□□□ 0.68
CLN5-218ENST00000637397 CHD1LQ86WJ1 897 aa19.32■□□□□ 0.68
CLN5-218ENST00000637397 KIF3AQ9Y496 699 aa19.32■□□□□ 0.68
CLN5-218ENST00000637397 RARSP54136 660 aaKnown RBP19.32■□□□□ 0.68
CLN5-218ENST00000637397 EID1Q9Y6B2 187 aa19.32■□□□□ 0.68
CLN5-218ENST00000637397 BIVM-ERCC5R4GMW8 1640 aa19.32■□□□□ 0.68
CLN5-218ENST00000637397 K7ELQ4 463 aaPredicted RBP19.31■□□□□ 0.68
CLN5-218ENST00000637397 TULP1O00294 542 aaPredicted RBP19.31■□□□□ 0.68
CLN5-218ENST00000637397 C9orf78Q9NZ63 289 aaPredicted RBP19.31■□□□□ 0.68
CLN5-218ENST00000637397 CT47B1P0C2W7 299 aaPredicted RBP19.31■□□□□ 0.68
CLN5-218ENST00000637397 TEFQ10587 303 aa19.31■□□□□ 0.68
CLN5-218ENST00000637397 ZNF592Q92610 1267 aa19.3■□□□□ 0.68
CLN5-218ENST00000637397 CAMSAP2Q08AD1 1489 aa19.3■□□□□ 0.68
CLN5-218ENST00000637397 ESPNB1AK53 854 aa19.3■□□□□ 0.68
CLN5-218ENST00000637397 CCDC173Q0VFZ6 552 aa19.3■□□□□ 0.68
CLN5-218ENST00000637397 ISY1Q9ULR0 285 aaKnown RBP19.29■□□□□ 0.68
CLN5-218ENST00000637397 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
CLN5-218ENST00000637397 IFIT2P09913 472 aaKnown RBP19.28■□□□□ 0.68
CLN5-218ENST00000637397 TMEM57Q8N5G2 664 aa19.28■□□□□ 0.68
CLN5-218ENST00000637397 TBC1D2Q9BYX2 928 aa19.28■□□□□ 0.68
CLN5-218ENST00000637397 NKTRP30414 1462 aaKnown RBP19.28■□□□□ 0.68
CLN5-218ENST00000637397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.28■□□□□ 0.68
CLN5-218ENST00000637397 LRPPRCP42704 1394 aaKnown RBP19.28■□□□□ 0.68
CLN5-218ENST00000637397 CCDC39Q9UFE4 941 aa19.27■□□□□ 0.68
CLN5-218ENST00000637397 BICD2Q8TD16 824 aa19.27■□□□□ 0.68
CLN5-218ENST00000637397 MBD3O95983 291 aa19.27■□□□□ 0.68
CLN5-218ENST00000637397 PRAM1Q96QH2 718 aa19.27■□□□□ 0.68
CLN5-218ENST00000637397 IGHDP01880 384 aa19.27■□□□□ 0.67
CLN5-218ENST00000637397 PLEKHH2Q8IVE3 1493 aa19.26■□□□□ 0.67
CLN5-218ENST00000637397 TAF7LQ5H9L4 462 aa19.26■□□□□ 0.67
CLN5-218ENST00000637397 ARHGEF11O15085 1522 aa19.26■□□□□ 0.67
CLN5-218ENST00000637397 IQGAP2Q13576 1575 aa19.25■□□□□ 0.67
CLN5-218ENST00000637397 RBM10P98175 930 aaKnown RBP19.25■□□□□ 0.67
CLN5-218ENST00000637397 CIZ1Q9ULV3 898 aaPredicted RBP19.25■□□□□ 0.67
CLN5-218ENST00000637397 TPM2P07951 284 aa19.25■□□□□ 0.67
CLN5-218ENST00000637397 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
CLN5-218ENST00000637397 NSD3Q9BZ95 1437 aa19.25■□□□□ 0.67
CLN5-218ENST00000637397 NPHP1O15259 732 aa19.24■□□□□ 0.67
CLN5-218ENST00000637397 TMPOP42166 694 aaKnown RBP19.24■□□□□ 0.67
CLN5-218ENST00000637397 SSH1Q8WYL5 1049 aa19.24■□□□□ 0.67
CLN5-218ENST00000637397 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
CLN5-218ENST00000637397 DISP3Q9P2K9 1392 aa19.24■□□□□ 0.67
CLN5-218ENST00000637397 CABP1Q9NZU7 370 aa19.23■□□□□ 0.67
CLN5-218ENST00000637397 UBTFL1P0CB47 393 aaPredicted RBP19.23■□□□□ 0.67
CLN5-218ENST00000637397 CCDC27Q2M243 656 aa19.23■□□□□ 0.67
CLN5-218ENST00000637397 CUL7Q14999 1698 aa19.22■□□□□ 0.67
CLN5-218ENST00000637397 MPNDQ8N594 471 aa19.22■□□□□ 0.67
CLN5-218ENST00000637397 PLB1Q6P1J6 1458 aa19.22■□□□□ 0.67
CLN5-218ENST00000637397 C1orf141Q5JVX7 400 aa19.21■□□□□ 0.67
CLN5-218ENST00000637397 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
CLN5-218ENST00000637397 SURF6O75683 361 aaKnown RBP19.21■□□□□ 0.67
CLN5-218ENST00000637397 RNF20Q5VTR2 975 aa19.21■□□□□ 0.67
CLN5-218ENST00000637397 CWC22Q9HCG8 908 aaKnown RBP19.21■□□□□ 0.67
CLN5-218ENST00000637397 MCM2P49736 904 aa19.2■□□□□ 0.66
CLN5-218ENST00000637397 IFT57Q9NWB7 429 aa19.2■□□□□ 0.66
CLN5-218ENST00000637397 SLC4A2P04920 1241 aa19.2■□□□□ 0.66
CLN5-218ENST00000637397 GNAI3P08754 354 aa19.2■□□□□ 0.66
CLN5-218ENST00000637397 CREBRFQ8IUR6 639 aa19.2■□□□□ 0.66
CLN5-218ENST00000637397 TSPY26PQ9H489 355 aa19.2■□□□□ 0.66
CLN5-218ENST00000637397 NEXNQ0ZGT2 675 aa19.19■□□□□ 0.66
CLN5-218ENST00000637397 G3BP1Q13283 466 aaKnown RBP eCLIP19.19■□□□□ 0.66
CLN5-218ENST00000637397 CCDC34Q96HJ3 373 aa19.19■□□□□ 0.66
CLN5-218ENST00000637397 TOMM22Q9NS69 142 aa19.19■□□□□ 0.66
CLN5-218ENST00000637397 IFT140Q96RY7 1462 aa19.19■□□□□ 0.66
CLN5-218ENST00000637397 ERC2O15083 957 aa19.19■□□□□ 0.66
CLN5-218ENST00000637397 TNNT3P45378 269 aaPredicted RBP19.19■□□□□ 0.66
CLN5-218ENST00000637397 SASS6Q6UVJ0 657 aa19.19■□□□□ 0.66
CLN5-218ENST00000637397 HSP90AB4PQ58FF6 505 aa19.19■□□□□ 0.66
CLN5-218ENST00000637397 CCDC141Q6ZP82 1450 aa19.18■□□□□ 0.66
CLN5-218ENST00000637397 FIBPO43427 364 aa19.18■□□□□ 0.66
CLN5-218ENST00000637397 ZNF771Q7L3S4 317 aaPredicted RBP19.18■□□□□ 0.66
CLN5-218ENST00000637397 MAP7D2Q96T17 732 aa19.18■□□□□ 0.66
CLN5-218ENST00000637397 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.18■□□□□ 0.66
CLN5-218ENST00000637397 PRKCSHP14314 528 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms