RNA–Protein interactions for RNA: ENST00000637352.1

SMARCA2-260, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-260ENST00000637352 DEFB132Q7Z7B7 95 aa12.52□□□□□ -0.41
SMARCA2-260ENST00000637352 GJD4Q96KN9 370 aaPredicted RBP12.52□□□□□ -0.41
SMARCA2-260ENST00000637352 STK26Q9P289 416 aa12.52□□□□□ -0.41
SMARCA2-260ENST00000637352 FOXD1Q16676 465 aa12.51□□□□□ -0.41
SMARCA2-260ENST00000637352 WAPLQ7Z5K2 1190 aa12.51□□□□□ -0.41
SMARCA2-260ENST00000637352 BCL9LQ86UU0 1499 aa12.51□□□□□ -0.41
SMARCA2-260ENST00000637352 NPHP3Q7Z494 1330 aa12.5□□□□□ -0.41
SMARCA2-260ENST00000637352 MYOM2P54296 1465 aa12.48□□□□□ -0.41
SMARCA2-260ENST00000637352 RGL3Q3MIN7 710 aa12.47□□□□□ -0.41
SMARCA2-260ENST00000637352 TMEM132EQ6IEE7 984 aa12.47□□□□□ -0.41
SMARCA2-260ENST00000637352 CCDC125Q86Z20 511 aa12.47□□□□□ -0.41
SMARCA2-260ENST00000637352 UNC5CLQ8IV45 518 aa12.47□□□□□ -0.41
SMARCA2-260ENST00000637352 HFM1A2PYH4 1435 aa12.46□□□□□ -0.41
SMARCA2-260ENST00000637352 ADGRF5Q8IZF2 1346 aa12.46□□□□□ -0.41
SMARCA2-260ENST00000637352 HAP1P54257 671 aaPredicted RBP12.46□□□□□ -0.41
SMARCA2-260ENST00000637352 CABLES1Q8TDN4 633 aa12.46□□□□□ -0.41
SMARCA2-260ENST00000637352 CCDC9Q9Y3X0 531 aaKnown RBP12.46□□□□□ -0.41
SMARCA2-260ENST00000637352 LAMC1P11047 1609 aa12.46□□□□□ -0.41
SMARCA2-260ENST00000637352 PXDNQ92626 1479 aa12.46□□□□□ -0.42
SMARCA2-260ENST00000637352 PLEKHH1Q9ULM0 1364 aa12.45□□□□□ -0.42
SMARCA2-260ENST00000637352 SF3B2Q13435 895 aaKnown RBP12.45□□□□□ -0.42
SMARCA2-260ENST00000637352 SEPT12Q8IYM1 358 aa12.45□□□□□ -0.42
SMARCA2-260ENST00000637352 SLC4A1APQ9BWU0 796 aaKnown RBP12.45□□□□□ -0.42
SMARCA2-260ENST00000637352 EP400Q96L91 3159 aa12.45□□□□□ -0.42
SMARCA2-260ENST00000637352 RALGAPBQ86X10 1494 aa12.45□□□□□ -0.42
SMARCA2-260ENST00000637352 NAIPQ13075 1403 aa12.45□□□□□ -0.42
SMARCA2-260ENST00000637352 COL22A1Q8NFW1 1626 aaPredicted RBP12.44□□□□□ -0.42
SMARCA2-260ENST00000637352 KIF1BO60333 1816 aa12.44□□□□□ -0.42
SMARCA2-260ENST00000637352 PSDA5PKW4 1024 aaPredicted RBP12.44□□□□□ -0.42
SMARCA2-260ENST00000637352 LMOD2Q6P5Q4 547 aa12.44□□□□□ -0.42
SMARCA2-260ENST00000637352 RPGRIP1LQ68CZ1 1315 aa12.43□□□□□ -0.42
SMARCA2-260ENST00000637352 A0A0G2JS52 829 aa12.43□□□□□ -0.42
SMARCA2-260ENST00000637352 MYT1Q01538 1121 aa12.43□□□□□ -0.42
SMARCA2-260ENST00000637352 KRT28Q7Z3Y7 464 aa12.43□□□□□ -0.42
SMARCA2-260ENST00000637352 BLMP54132 1417 aaPredicted RBP12.43□□□□□ -0.42
SMARCA2-260ENST00000637352 LRPPRCP42704 1394 aaKnown RBP12.43□□□□□ -0.42
SMARCA2-260ENST00000637352 SPATA31A3Q5VYP0 1347 aa12.42□□□□□ -0.42
SMARCA2-260ENST00000637352 GLI3P10071 1580 aa12.42□□□□□ -0.42
SMARCA2-260ENST00000637352 SAFB2Q14151 953 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMARCA2-260ENST00000637352 SLIT2O94813 1529 aa12.41□□□□□ -0.42
SMARCA2-260ENST00000637352 CDC42BPGQ6DT37 1551 aa12.39□□□□□ -0.43
SMARCA2-260ENST00000637352 FAM182BQ5T319 152 aa12.39□□□□□ -0.43
SMARCA2-260ENST00000637352 KRT27Q7Z3Y8 459 aa12.39□□□□□ -0.43
SMARCA2-260ENST00000637352 PRAG1Q86YV5 1406 aa12.38□□□□□ -0.43
SMARCA2-260ENST00000637352 VPS72Q15906 364 aa12.38□□□□□ -0.43
SMARCA2-260ENST00000637352 PMFBP1Q8TBY8 1022 aa12.38□□□□□ -0.43
SMARCA2-260ENST00000637352 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-260ENST00000637352 MARF1Q9Y4F3 1742 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-260ENST00000637352 FAM98CQ17RN3 349 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-260ENST00000637352 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
SMARCA2-260ENST00000637352 PPLO60437 1756 aa12.36□□□□□ -0.43
SMARCA2-260ENST00000637352 FAM83GA6ND36 823 aa12.36□□□□□ -0.43
SMARCA2-260ENST00000637352 EN1Q05925 392 aaPredicted RBP12.36□□□□□ -0.43
SMARCA2-260ENST00000637352 PSME1Q06323 249 aa12.36□□□□□ -0.43
SMARCA2-260ENST00000637352 BRWD3Q6RI45 1802 aa12.36□□□□□ -0.43
SMARCA2-260ENST00000637352 BAG6P46379 1132 aa12.35□□□□□ -0.43
SMARCA2-260ENST00000637352 CCDC144AA2RUR9 1427 aa12.35□□□□□ -0.43
SMARCA2-260ENST00000637352 USP32Q8NFA0 1604 aa12.34□□□□□ -0.43
SMARCA2-260ENST00000637352 ABCC11Q96J66 1382 aa12.34□□□□□ -0.43
SMARCA2-260ENST00000637352 HRCP23327 699 aa12.34□□□□□ -0.43
SMARCA2-260ENST00000637352 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
SMARCA2-260ENST00000637352 R3HDM1Q15032 1099 aaKnown RBP12.33□□□□□ -0.44
SMARCA2-260ENST00000637352 CFAP70Q5T0N1 1121 aa12.33□□□□□ -0.44
SMARCA2-260ENST00000637352 BTG4Q9NY30 223 aa12.33□□□□□ -0.44
SMARCA2-260ENST00000637352 TECPR2O15040 1411 aa12.33□□□□□ -0.44
SMARCA2-260ENST00000637352 YTHDC2Q9H6S0 1430 aaKnown RBP12.33□□□□□ -0.44
SMARCA2-260ENST00000637352 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.33□□□□□ -0.44
SMARCA2-260ENST00000637352 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
SMARCA2-260ENST00000637352 PRAM1Q96QH2 718 aa12.32□□□□□ -0.44
SMARCA2-260ENST00000637352 FMN2Q9NZ56 1722 aa12.31□□□□□ -0.44
SMARCA2-260ENST00000637352 HIRIP3Q9BW71 556 aaPredicted RBP12.31□□□□□ -0.44
SMARCA2-260ENST00000637352 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
SMARCA2-260ENST00000637352 SPATA31E1Q6ZUB1 1445 aa12.3□□□□□ -0.44
SMARCA2-260ENST00000637352 MPHOSPH9Q99550 1183 aa12.3□□□□□ -0.44
SMARCA2-260ENST00000637352 POGKQ9P215 609 aa12.3□□□□□ -0.44
SMARCA2-260ENST00000637352 PIK3C2GO75747 1445 aa12.29□□□□□ -0.44
SMARCA2-260ENST00000637352 KIF1AQ12756 1690 aa12.29□□□□□ -0.44
SMARCA2-260ENST00000637352 RGPD8O14715 1765 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-260ENST00000637352 EZH2Q15910 746 aaKnown RBP12.29□□□□□ -0.44
SMARCA2-260ENST00000637352 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
SMARCA2-260ENST00000637352 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
SMARCA2-260ENST00000637352 PAK3O75914 559 aaPredicted RBP12.28□□□□□ -0.44
SMARCA2-260ENST00000637352 C14orf93Q9H972 538 aaKnown RBP12.28□□□□□ -0.44
SMARCA2-260ENST00000637352 ARHGEF10O15013 1369 aa12.28□□□□□ -0.44
SMARCA2-260ENST00000637352 DHX57Q6P158 1386 aaKnown RBP12.28□□□□□ -0.44
SMARCA2-260ENST00000637352 NRXN1Q9ULB1 1477 aa12.27□□□□□ -0.44
SMARCA2-260ENST00000637352 MINK1Q8N4C8 1332 aaPredicted RBP12.27□□□□□ -0.45
SMARCA2-260ENST00000637352 LRP5O75197 1615 aa12.26□□□□□ -0.45
SMARCA2-260ENST00000637352 TRIM37O94972 964 aa12.26□□□□□ -0.45
SMARCA2-260ENST00000637352 SIRT1Q96EB6 747 aa12.26□□□□□ -0.45
SMARCA2-260ENST00000637352 STRN4Q9NRL3 753 aa12.26□□□□□ -0.45
SMARCA2-260ENST00000637352 TRAK1Q9UPV9 953 aa12.26□□□□□ -0.45
SMARCA2-260ENST00000637352 KNDC1Q76NI1 1749 aa12.25□□□□□ -0.45
SMARCA2-260ENST00000637352 CHRNA2Q15822 529 aa12.25□□□□□ -0.45
SMARCA2-260ENST00000637352 NUTM2GQ5VZR2 741 aa12.25□□□□□ -0.45
SMARCA2-260ENST00000637352 USP35Q9P2H5 1018 aa12.25□□□□□ -0.45
SMARCA2-260ENST00000637352 SPATA31A5Q5VU36 1347 aa12.25□□□□□ -0.45
SMARCA2-260ENST00000637352 SPATA31A7Q8IWB4 1347 aa12.25□□□□□ -0.45
SMARCA2-260ENST00000637352 IFT172Q9UG01 1749 aa12.25□□□□□ -0.45
SMARCA2-260ENST00000637352 NGDNQ8NEJ9 315 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms