RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 PLEKHH1Q9ULM0 1364 aa18.55■□□□□ 0.56
LINC00643-207ENST00000637212 MINK1Q8N4C8 1332 aaPredicted RBP18.55■□□□□ 0.56
LINC00643-207ENST00000637212 CPS1P31327 1500 aa18.55■□□□□ 0.56
LINC00643-207ENST00000637212 DDX10Q13206 875 aaKnown RBP18.55■□□□□ 0.56
LINC00643-207ENST00000637212 CERKQ8TCT0 537 aa18.54■□□□□ 0.56
LINC00643-207ENST00000637212 WASLO00401 505 aaPredicted RBP18.53■□□□□ 0.56
LINC00643-207ENST00000637212 CDK19Q9BWU1 502 aa18.53■□□□□ 0.56
LINC00643-207ENST00000637212 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.56
LINC00643-207ENST00000637212 PROSER2Q86WR7 435 aaPredicted RBP18.52■□□□□ 0.56
LINC00643-207ENST00000637212 POLR3GLQ9BT43 218 aa18.52■□□□□ 0.56
LINC00643-207ENST00000637212 KNDC1Q76NI1 1749 aa18.52■□□□□ 0.55
LINC00643-207ENST00000637212 ARHGEF28Q8N1W1 1705 aaKnown RBP18.51■□□□□ 0.55
LINC00643-207ENST00000637212 NCOA3Q9Y6Q9 1424 aa18.49■□□□□ 0.55
LINC00643-207ENST00000637212 SRPK2P78362 688 aaKnown RBP18.49■□□□□ 0.55
LINC00643-207ENST00000637212 XRN1Q8IZH2 1706 aaKnown RBP18.49■□□□□ 0.55
LINC00643-207ENST00000637212 CABP2Q9NPB3 220 aa18.48■□□□□ 0.55
LINC00643-207ENST00000637212 CHD2O14647 1828 aaKnown RBP18.47■□□□□ 0.55
LINC00643-207ENST00000637212 ATAD2Q6PL18 1390 aa18.47■□□□□ 0.55
LINC00643-207ENST00000637212 NWD1Q149M9 1564 aa18.47■□□□□ 0.55
LINC00643-207ENST00000637212 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
LINC00643-207ENST00000637212 NINLQ9Y2I6 1382 aa18.45■□□□□ 0.54
LINC00643-207ENST00000637212 QRICH2Q9H0J4 1663 aa18.45■□□□□ 0.54
LINC00643-207ENST00000637212 C19orf44Q9H6X5 657 aa18.45■□□□□ 0.54
LINC00643-207ENST00000637212 NUDT16Q96DE0 195 aaKnown RBP18.44■□□□□ 0.54
LINC00643-207ENST00000637212 PANK3Q9H999 370 aa18.44■□□□□ 0.54
LINC00643-207ENST00000637212 CCDC61Q9Y6R9 512 aa18.44■□□□□ 0.54
LINC00643-207ENST00000637212 TULP4Q9NRJ4 1543 aa18.44■□□□□ 0.54
LINC00643-207ENST00000637212 ZNF335Q9H4Z2 1342 aaPredicted RBP18.43■□□□□ 0.54
LINC00643-207ENST00000637212 LTBP4Q8N2S1 1624 aa18.42■□□□□ 0.54
LINC00643-207ENST00000637212 C14orf37Q86TY3 774 aa18.42■□□□□ 0.54
LINC00643-207ENST00000637212 TMC1Q8TDI8 760 aa18.42■□□□□ 0.54
LINC00643-207ENST00000637212 SLC12A5Q9H2X9 1139 aa18.42■□□□□ 0.54
LINC00643-207ENST00000637212 TMEM94Q12767 1356 aa18.41■□□□□ 0.54
LINC00643-207ENST00000637212 ADGRB2O60241 1585 aa18.4■□□□□ 0.54
LINC00643-207ENST00000637212 PER1O15534 1290 aaPredicted RBP18.4■□□□□ 0.54
LINC00643-207ENST00000637212 RBM33Q96EV2 1170 aaKnown RBP18.4■□□□□ 0.54
LINC00643-207ENST00000637212 ADGRL3Q9HAR2 1447 aa18.4■□□□□ 0.54
LINC00643-207ENST00000637212 PLEKHG3A1L390 1219 aa18.39■□□□□ 0.53
LINC00643-207ENST00000637212 TERF2IPQ9NYB0 399 aa18.39■□□□□ 0.53
LINC00643-207ENST00000637212 CABP1Q9NZU7 370 aa18.39■□□□□ 0.53
LINC00643-207ENST00000637212 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.39■□□□□ 0.53
LINC00643-207ENST00000637212 IQSEC2Q5JU85 1478 aa18.39■□□□□ 0.53
LINC00643-207ENST00000637212 ANKARQ7Z5J8 1434 aa18.38■□□□□ 0.53
LINC00643-207ENST00000637212 ZNF692Q9BU19 519 aaPredicted RBP18.37■□□□□ 0.53
LINC00643-207ENST00000637212 ATF3P18847 181 aa18.36■□□□□ 0.53
LINC00643-207ENST00000637212 HDGFL2Q7Z4V5 671 aaPredicted RBP18.36■□□□□ 0.53
LINC00643-207ENST00000637212 PRR36Q9H6K5 1346 aa18.36■□□□□ 0.53
LINC00643-207ENST00000637212 CADPS2Q86UW7 1296 aa18.35■□□□□ 0.53
LINC00643-207ENST00000637212 CARD14Q9BXL6 1004 aa18.35■□□□□ 0.53
LINC00643-207ENST00000637212 KNSTRNQ9Y448 316 aa18.35■□□□□ 0.53
LINC00643-207ENST00000637212 LRRC7Q96NW7 1537 aa18.34■□□□□ 0.53
LINC00643-207ENST00000637212 ANKRD36BQ8N2N9 1353 aa18.34■□□□□ 0.53
LINC00643-207ENST00000637212 DCCP43146 1447 aa18.33■□□□□ 0.53
LINC00643-207ENST00000637212 MSH6P52701 1360 aa18.33■□□□□ 0.53
LINC00643-207ENST00000637212 ANP32CO43423 234 aa18.33■□□□□ 0.52
LINC00643-207ENST00000637212 PPIP5K1Q6PFW1 1433 aa18.32■□□□□ 0.52
LINC00643-207ENST00000637212 CDC42BPGQ6DT37 1551 aa18.31■□□□□ 0.52
LINC00643-207ENST00000637212 NUTM2FA1L443 756 aa18.31■□□□□ 0.52
LINC00643-207ENST00000637212 ATP7BP35670 1465 aa18.31■□□□□ 0.52
LINC00643-207ENST00000637212 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
LINC00643-207ENST00000637212 CPSF1Q10570 1443 aaKnown RBP18.29■□□□□ 0.52
LINC00643-207ENST00000637212 STRCP1A6NGW2 1772 aa18.29■□□□□ 0.52
LINC00643-207ENST00000637212 ESCO1Q5FWF5 840 aa18.28■□□□□ 0.52
LINC00643-207ENST00000637212 AMER1Q5JTC6 1135 aaPredicted RBP18.28■□□□□ 0.52
LINC00643-207ENST00000637212 PHF8Q9UPP1 1060 aa18.28■□□□□ 0.52
LINC00643-207ENST00000637212 ACEP12821 1306 aa18.27■□□□□ 0.52
LINC00643-207ENST00000637212 RALBP1Q15311 655 aa18.27■□□□□ 0.52
LINC00643-207ENST00000637212 MIER1Q8N108 512 aa18.27■□□□□ 0.52
LINC00643-207ENST00000637212 NGDNQ8NEJ9 315 aaKnown RBP18.27■□□□□ 0.52
LINC00643-207ENST00000637212 A0A1W2PP64 1363 aa18.27■□□□□ 0.51
LINC00643-207ENST00000637212 POLR3AO14802 1390 aaPredicted RBP18.27■□□□□ 0.51
LINC00643-207ENST00000637212 KTN1Q86UP2 1357 aaKnown RBP18.27■□□□□ 0.51
LINC00643-207ENST00000637212 CD163L1Q9NR16 1453 aa18.26■□□□□ 0.51
LINC00643-207ENST00000637212 CGNL1Q0VF96 1302 aa18.26■□□□□ 0.51
LINC00643-207ENST00000637212 PRKRIP1Q9H875 184 aaPredicted RBP18.26■□□□□ 0.51
LINC00643-207ENST00000637212 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
LINC00643-207ENST00000637212 SLAIN2Q9P270 581 aa18.25■□□□□ 0.51
LINC00643-207ENST00000637212 BRD4O60885 1362 aaPredicted RBP18.24■□□□□ 0.51
LINC00643-207ENST00000637212 C1orf167Q5SNV9 1468 aa18.24■□□□□ 0.51
LINC00643-207ENST00000637212 NSD3Q9BZ95 1437 aa18.23■□□□□ 0.51
LINC00643-207ENST00000637212 NALCNQ8IZF0 1738 aa18.23■□□□□ 0.51
LINC00643-207ENST00000637212 MYOM1P52179 1685 aa18.23■□□□□ 0.51
LINC00643-207ENST00000637212 ORAI2Q96SN7 254 aa18.23■□□□□ 0.51
LINC00643-207ENST00000637212 MST1RQ04912 1400 aa18.23■□□□□ 0.51
LINC00643-207ENST00000637212 FMN2Q9NZ56 1722 aa18.22■□□□□ 0.51
LINC00643-207ENST00000637212 EDC4Q6P2E9 1401 aaKnown RBP18.22■□□□□ 0.51
LINC00643-207ENST00000637212 NSD2O96028 1365 aa18.21■□□□□ 0.51
LINC00643-207ENST00000637212 FYB1O15117 783 aa18.21■□□□□ 0.51
LINC00643-207ENST00000637212 PSME1Q06323 249 aa18.21■□□□□ 0.51
LINC00643-207ENST00000637212 CC2D1BQ5T0F9 858 aaKnown RBP18.21■□□□□ 0.51
LINC00643-207ENST00000637212 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
LINC00643-207ENST00000637212 TTC21BQ7Z4L5 1316 aa18.2■□□□□ 0.5
LINC00643-207ENST00000637212 USP32Q8NFA0 1604 aa18.2■□□□□ 0.5
LINC00643-207ENST00000637212 TTC21AQ8NDW8 1320 aa18.19■□□□□ 0.5
LINC00643-207ENST00000637212 USP6P35125 1406 aa18.18■□□□□ 0.5
LINC00643-207ENST00000637212 SSH2Q76I76 1423 aa18.18■□□□□ 0.5
LINC00643-207ENST00000637212 PARD3Q8TEW0 1356 aa18.17■□□□□ 0.5
LINC00643-207ENST00000637212 FOXO3O43524 673 aa18.17■□□□□ 0.5
LINC00643-207ENST00000637212 MORC1Q86VD1 984 aa18.17■□□□□ 0.5
LINC00643-207ENST00000637212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms