RNA–Protein interactions for RNA: ENST00000637194.1

SYNGAP1-220, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-220ENST00000637194 HOXA2O43364 376 aa4.09□□□□□ -1.75
SYNGAP1-220ENST00000637194 DXOO77932 396 aaKnown RBP4.09□□□□□ -1.75
SYNGAP1-220ENST00000637194 MYT1Q01538 1121 aa4.09□□□□□ -1.75
SYNGAP1-220ENST00000637194 USB1Q9BQ65 265 aaKnown RBP4.09□□□□□ -1.75
SYNGAP1-220ENST00000637194 PRDM9Q9NQV7 894 aa4.09□□□□□ -1.75
SYNGAP1-220ENST00000637194 FAM187AA6NFU0 413 aa4.08□□□□□ -1.76
SYNGAP1-220ENST00000637194 TNFRSF10AO00220 468 aa4.08□□□□□ -1.76
SYNGAP1-220ENST00000637194 ZMYND10O75800 440 aa4.08□□□□□ -1.76
SYNGAP1-220ENST00000637194 KRI1Q8N9T8 703 aaKnown RBP4.08□□□□□ -1.76
SYNGAP1-220ENST00000637194 FOXC1Q12948 553 aa4.07□□□□□ -1.76
SYNGAP1-220ENST00000637194 AMHR2Q16671 573 aa4.07□□□□□ -1.76
SYNGAP1-220ENST00000637194 ZNF787Q6DD87 383 aa4.07□□□□□ -1.76
SYNGAP1-220ENST00000637194 NUTM1Q86Y26 1132 aa4.07□□□□□ -1.76
SYNGAP1-220ENST00000637194 CRIPAKQ8N1N5 446 aa4.07□□□□□ -1.76
SYNGAP1-220ENST00000637194 TOR4AQ9NXH8 423 aa4.07□□□□□ -1.76
SYNGAP1-220ENST00000637194 WNT7AO00755 349 aa4.06□□□□□ -1.76
SYNGAP1-220ENST00000637194 AVPP01185 164 aa4.06□□□□□ -1.76
SYNGAP1-220ENST00000637194 TRIM32Q13049 653 aa4.06□□□□□ -1.76
SYNGAP1-220ENST00000637194 CYP4X1Q8N118 509 aa4.06□□□□□ -1.76
SYNGAP1-220ENST00000637194 ZC3H15Q8WU90 426 aaKnown RBP4.06□□□□□ -1.76
SYNGAP1-220ENST00000637194 REPIN1Q9BWE0 567 aaKnown RBP4.06□□□□□ -1.76
SYNGAP1-220ENST00000637194 JUNDP17535 347 aa4.05□□□□□ -1.76
SYNGAP1-220ENST00000637194 SSTR3P32745 418 aaPredicted RBP4.05□□□□□ -1.76
SYNGAP1-220ENST00000637194 CTC1Q2NKJ3 1217 aa4.05□□□□□ -1.76
SYNGAP1-220ENST00000637194 RETREG3Q86VR2 466 aa4.05□□□□□ -1.76
SYNGAP1-220ENST00000637194 HLA-CQ95604 372 aa4.05□□□□□ -1.76
SYNGAP1-220ENST00000637194 FDX1P10109 184 aa4.04□□□□□ -1.76
SYNGAP1-220ENST00000637194 GJA5P36382 358 aa4.04□□□□□ -1.76
SYNGAP1-220ENST00000637194 SMCPP49901 116 aaPredicted RBP4.04□□□□□ -1.76
SYNGAP1-220ENST00000637194 WNT7BP56706 349 aa4.04□□□□□ -1.76
SYNGAP1-220ENST00000637194 GUCA2AQ02747 115 aa4.04□□□□□ -1.76
SYNGAP1-220ENST00000637194 TTLL12Q14166 644 aaPredicted RBP4.04□□□□□ -1.76
SYNGAP1-220ENST00000637194 SPIRE2Q8WWL2 714 aa4.04□□□□□ -1.76
SYNGAP1-220ENST00000637194 AAASQ9NRG9 546 aa4.04□□□□□ -1.76
SYNGAP1-220ENST00000637194 TTC24A2A3L6 582 aaPredicted RBP4.03□□□□□ -1.76
SYNGAP1-220ENST00000637194 DIXDC1Q155Q3 683 aa4.03□□□□□ -1.76
SYNGAP1-220ENST00000637194 GIGYF2Q6Y7W6 1299 aaKnown RBP4.03□□□□□ -1.76
SYNGAP1-220ENST00000637194 SNIP1Q8TAD8 396 aaKnown RBP4.03□□□□□ -1.76
SYNGAP1-220ENST00000637194 PCDHGC3Q9UN70 934 aa4.03□□□□□ -1.76
SYNGAP1-220ENST00000637194 SPDYE5A6NIY4 337 aa4.02□□□□□ -1.77
SYNGAP1-220ENST00000637194 ST8SIA5O15466 376 aa4.02□□□□□ -1.77
SYNGAP1-220ENST00000637194 DESI1Q6ICB0 168 aa4.02□□□□□ -1.77
SYNGAP1-220ENST00000637194 CCDC24Q8N4L8 307 aa4.02□□□□□ -1.77
SYNGAP1-220ENST00000637194 SYMPKQ92797 1274 aaKnown RBP4.02□□□□□ -1.77
SYNGAP1-220ENST00000637194 ZNF775Q96BV0 537 aaPredicted RBP4.02□□□□□ -1.77
SYNGAP1-220ENST00000637194 MRGPRX2Q96LB1 330 aa4.02□□□□□ -1.77
SYNGAP1-220ENST00000637194 AK7Q96M32 723 aa4.02□□□□□ -1.77
SYNGAP1-220ENST00000637194 MOXD2PA6NHM9 499 aa4.01□□□□□ -1.77
SYNGAP1-220ENST00000637194 C6orf229H3BNL8 230 aa4.01□□□□□ -1.77
SYNGAP1-220ENST00000637194 TRIM66O15016 1216 aa4.01□□□□□ -1.77
SYNGAP1-220ENST00000637194 AXIN1O15169 862 aa4.01□□□□□ -1.77
SYNGAP1-220ENST00000637194 MS4A1P11836 297 aa4.01□□□□□ -1.77
SYNGAP1-220ENST00000637194 SMPD1P17405 629 aa4.01□□□□□ -1.77
SYNGAP1-220ENST00000637194 SKOR1P84550 965 aa4.01□□□□□ -1.77
SYNGAP1-220ENST00000637194 PTPRNQ16849 979 aa4.01□□□□□ -1.77
SYNGAP1-220ENST00000637194 RC3H1Q5TC82 1133 aaKnown RBP4.01□□□□□ -1.77
SYNGAP1-220ENST00000637194 PARP9Q8IXQ6 854 aa4.01□□□□□ -1.77
SYNGAP1-220ENST00000637194 NUDT12Q9BQG2 462 aa4.01□□□□□ -1.77
SYNGAP1-220ENST00000637194 POTECB2RU33 542 aa4□□□□□ -1.77
SYNGAP1-220ENST00000637194 CCNYL3P0C7X3 344 aa4□□□□□ -1.77
SYNGAP1-220ENST00000637194 NDUFV2P19404 249 aa4□□□□□ -1.77
SYNGAP1-220ENST00000637194 MTMR2Q13614 643 aa4□□□□□ -1.77
SYNGAP1-220ENST00000637194 PRR7Q8TB68 274 aa4□□□□□ -1.77
SYNGAP1-220ENST00000637194 BEGAINQ9BUH8 593 aa4□□□□□ -1.77
SYNGAP1-220ENST00000637194 SPTLC1O15269 473 aa3.99□□□□□ -1.77
SYNGAP1-220ENST00000637194 PTCRAQ6ISU1 281 aaPredicted RBP3.99□□□□□ -1.77
SYNGAP1-220ENST00000637194 RSBN1LQ6PCB5 846 aaPredicted RBP3.99□□□□□ -1.77
SYNGAP1-220ENST00000637194 TBC1D2Q9BYX2 928 aa3.99□□□□□ -1.77
SYNGAP1-220ENST00000637194 EVA1BQ9NVM1 165 aa3.99□□□□□ -1.77
SYNGAP1-220ENST00000637194 J3QL48 77 aa3.98□□□□□ -1.77
SYNGAP1-220ENST00000637194 SIAH2O43255 324 aa3.98□□□□□ -1.77
SYNGAP1-220ENST00000637194 KCNH2Q12809 1159 aa3.98□□□□□ -1.77
SYNGAP1-220ENST00000637194 TUSC1Q2TAM9 212 aa3.98□□□□□ -1.77
SYNGAP1-220ENST00000637194 PRPF38BQ5VTL8 546 aaKnown RBP3.98□□□□□ -1.77
SYNGAP1-220ENST00000637194 DACH1Q9UI36 760 aa3.98□□□□□ -1.77
SYNGAP1-220ENST00000637194 SH3BP2P78314 561 aa3.97□□□□□ -1.77
SYNGAP1-220ENST00000637194 PDE4DQ08499 809 aa3.97□□□□□ -1.77
SYNGAP1-220ENST00000637194 LYPD8Q6UX82 237 aa3.97□□□□□ -1.77
SYNGAP1-220ENST00000637194 MPNDQ8N594 471 aa3.97□□□□□ -1.77
SYNGAP1-220ENST00000637194 EHBP1Q8NDI1 1231 aa3.97□□□□□ -1.77
SYNGAP1-220ENST00000637194 UNC93B1Q9H1C4 597 aa3.97□□□□□ -1.77
SYNGAP1-220ENST00000637194 ZBTB3Q9H5J0 574 aa3.97□□□□□ -1.77
SYNGAP1-220ENST00000637194 SENP2Q9HC62 589 aa3.97□□□□□ -1.77
SYNGAP1-220ENST00000637194 ATP13A2Q9NQ11 1180 aa3.97□□□□□ -1.77
SYNGAP1-220ENST00000637194 GMPR2Q9P2T1 348 aaKnown RBP3.97□□□□□ -1.77
SYNGAP1-220ENST00000637194 C11orf95C9JLR9 678 aaPredicted RBP3.96□□□□□ -1.78
SYNGAP1-220ENST00000637194 ALDH1A1P00352 501 aa3.96□□□□□ -1.78
SYNGAP1-220ENST00000637194 TREML4Q6UXN2 200 aa3.96□□□□□ -1.78
SYNGAP1-220ENST00000637194 RIC3Q7Z5B4 369 aa3.96□□□□□ -1.78
SYNGAP1-220ENST00000637194 HPS1Q92902 700 aa3.96□□□□□ -1.78
SYNGAP1-220ENST00000637194 KIFC2Q96AC6 838 aa3.96□□□□□ -1.78
SYNGAP1-220ENST00000637194 CFAP99D6REC4 459 aa3.95□□□□□ -1.78
SYNGAP1-220ENST00000637194 HRCP23327 699 aa3.95□□□□□ -1.78
SYNGAP1-220ENST00000637194 VARSP26640 1264 aaKnown RBP3.95□□□□□ -1.78
SYNGAP1-220ENST00000637194 LCE2AQ5TA79 106 aaPredicted RBP3.95□□□□□ -1.78
SYNGAP1-220ENST00000637194 ZNF511Q8NB15 262 aa3.95□□□□□ -1.78
SYNGAP1-220ENST00000637194 TRIM47Q96LD4 638 aa3.95□□□□□ -1.78
SYNGAP1-220ENST00000637194 PCDHB15Q9Y5E8 787 aa3.95□□□□□ -1.78
SYNGAP1-220ENST00000637194 WASF2Q9Y6W5 498 aa3.95□□□□□ -1.78
SYNGAP1-220ENST00000637194 PLEKHG3A1L390 1219 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms