RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 CLCN1P35523 988 aa19.83■□□□□ 0.77
CACNA1A-235ENST00000637004 PANK1Q8TE04 598 aa19.82■□□□□ 0.76
CACNA1A-235ENST00000637004 MCM4P33991 863 aa19.82■□□□□ 0.76
CACNA1A-235ENST00000637004 PLXNC1O60486 1568 aa19.82■□□□□ 0.76
CACNA1A-235ENST00000637004 IQGAP3Q86VI3 1631 aa19.81■□□□□ 0.76
CACNA1A-235ENST00000637004 ARAP3Q8WWN8 1544 aa19.8■□□□□ 0.76
CACNA1A-235ENST00000637004 NAP1L5Q96NT1 182 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-235ENST00000637004 ZNF518AQ6AHZ1 1483 aa19.8■□□□□ 0.76
CACNA1A-235ENST00000637004 STAC3Q96MF2 364 aa19.79■□□□□ 0.76
CACNA1A-235ENST00000637004 MAST1Q9Y2H9 1570 aa19.78■□□□□ 0.76
CACNA1A-235ENST00000637004 SCAF11Q99590 1463 aaKnown RBP19.78■□□□□ 0.76
CACNA1A-235ENST00000637004 FRMPD1Q5SYB0 1578 aa19.77■□□□□ 0.76
CACNA1A-235ENST00000637004 MRE11P49959 708 aa19.77■□□□□ 0.76
CACNA1A-235ENST00000637004 CHMP5Q9NZZ3 219 aa19.77■□□□□ 0.76
CACNA1A-235ENST00000637004 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
CACNA1A-235ENST00000637004 IQGAP1P46940 1657 aa19.77■□□□□ 0.76
CACNA1A-235ENST00000637004 GGT6Q6P531 493 aa19.76■□□□□ 0.75
CACNA1A-235ENST00000637004 WWC1Q8IX03 1113 aa19.76■□□□□ 0.75
CACNA1A-235ENST00000637004 ARXQ96QS3 562 aa19.76■□□□□ 0.75
CACNA1A-235ENST00000637004 RWDD1Q9H446 243 aaPredicted RBP19.76■□□□□ 0.75
CACNA1A-235ENST00000637004 ISY1Q9ULR0 285 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-235ENST00000637004 PDZRN3Q9UPQ7 1066 aa19.75■□□□□ 0.75
CACNA1A-235ENST00000637004 HSP90AA1P07900 732 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-235ENST00000637004 RRP9O43818 475 aaKnown RBP19.74■□□□□ 0.75
CACNA1A-235ENST00000637004 TRAK2O60296 914 aa19.74■□□□□ 0.75
CACNA1A-235ENST00000637004 CFAP74Q9C0B2 1584 aa19.74■□□□□ 0.75
CACNA1A-235ENST00000637004 GZF1Q9H116 711 aaPredicted RBP19.74■□□□□ 0.75
CACNA1A-235ENST00000637004 KIF3BO15066 747 aa19.73■□□□□ 0.75
CACNA1A-235ENST00000637004 PCDHB15Q9Y5E8 787 aa19.73■□□□□ 0.75
CACNA1A-235ENST00000637004 MADDQ8WXG6 1647 aa19.73■□□□□ 0.75
CACNA1A-235ENST00000637004 PANK2Q9BZ23 570 aa19.73■□□□□ 0.75
CACNA1A-235ENST00000637004 RARSP54136 660 aaKnown RBP19.72■□□□□ 0.75
CACNA1A-235ENST00000637004 RICTORQ6R327 1708 aa19.72■□□□□ 0.75
CACNA1A-235ENST00000637004 HSP90AA2PQ14568 343 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-235ENST00000637004 DDX11L8A8MPP1 907 aa19.71■□□□□ 0.75
CACNA1A-235ENST00000637004 DUOX2Q9NRD8 1548 aa19.7■□□□□ 0.74
CACNA1A-235ENST00000637004 MYH16Q9H6N6 1097 aa19.7■□□□□ 0.74
CACNA1A-235ENST00000637004 POLR3AO14802 1390 aaPredicted RBP19.69■□□□□ 0.74
CACNA1A-235ENST00000637004 MYOM1P52179 1685 aa19.69■□□□□ 0.74
CACNA1A-235ENST00000637004 C22orf23Q9BZE7 217 aa19.69■□□□□ 0.74
CACNA1A-235ENST00000637004 SPRYD3Q8NCJ5 442 aa19.69■□□□□ 0.74
CACNA1A-235ENST00000637004 ATP7AQ04656 1500 aa19.67■□□□□ 0.74
CACNA1A-235ENST00000637004 GRPEL1Q9HAV7 217 aa19.67■□□□□ 0.74
CACNA1A-235ENST00000637004 RLBP1P12271 317 aa19.66■□□□□ 0.74
CACNA1A-235ENST00000637004 ZMYND15Q9H091 742 aa19.66■□□□□ 0.74
CACNA1A-235ENST00000637004 KDM5AP29375 1690 aaKnown RBP19.66■□□□□ 0.74
CACNA1A-235ENST00000637004 KIDINS220Q9ULH0 1771 aa19.66■□□□□ 0.74
CACNA1A-235ENST00000637004 WDR63Q8IWG1 891 aa19.66■□□□□ 0.74
CACNA1A-235ENST00000637004 ZFYVE16Q7Z3T8 1539 aa19.65■□□□□ 0.74
CACNA1A-235ENST00000637004 ESPNB1AK53 854 aa19.65■□□□□ 0.74
CACNA1A-235ENST00000637004 HSCBQ8IWL3 235 aa19.65■□□□□ 0.74
CACNA1A-235ENST00000637004 RUNDC1Q96C34 613 aa19.65■□□□□ 0.74
CACNA1A-235ENST00000637004 MLH3Q9UHC1 1453 aa19.65■□□□□ 0.74
CACNA1A-235ENST00000637004 HECW2Q9P2P5 1572 aa19.64■□□□□ 0.73
CACNA1A-235ENST00000637004 VSIG10Q8N0Z9 540 aa19.63■□□□□ 0.73
CACNA1A-235ENST00000637004 ABCA6Q8N139 1617 aa19.63■□□□□ 0.73
CACNA1A-235ENST00000637004 MFAP1P55081 439 aaKnown RBP19.62■□□□□ 0.73
CACNA1A-235ENST00000637004 TRIM44Q96DX7 344 aaPredicted RBP19.62■□□□□ 0.73
CACNA1A-235ENST00000637004 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
CACNA1A-235ENST00000637004 RTEL1-TNFRSF6BF6WH68 1400 aa19.62■□□□□ 0.73
CACNA1A-235ENST00000637004 MVPQ14764 893 aaKnown RBP19.61■□□□□ 0.73
CACNA1A-235ENST00000637004 CARD14Q9BXL6 1004 aa19.61■□□□□ 0.73
CACNA1A-235ENST00000637004 SPHKAPQ2M3C7 1700 aa19.61■□□□□ 0.73
CACNA1A-235ENST00000637004 NEUROD2Q15784 382 aa19.61■□□□□ 0.73
CACNA1A-235ENST00000637004 CEBPAP49715 358 aaPredicted RBP19.6■□□□□ 0.73
CACNA1A-235ENST00000637004 TCP11L2Q8N4U5 519 aa19.6■□□□□ 0.73
CACNA1A-235ENST00000637004 KANK1Q14678 1352 aa19.59■□□□□ 0.73
CACNA1A-235ENST00000637004 DIP2CQ9Y2E4 1556 aa19.59■□□□□ 0.73
CACNA1A-235ENST00000637004 CCDC27Q2M243 656 aa19.59■□□□□ 0.73
CACNA1A-235ENST00000637004 TNNQ9UQP3 1299 aa19.59■□□□□ 0.73
CACNA1A-235ENST00000637004 SIGLEC1Q9BZZ2 1709 aa19.59■□□□□ 0.73
CACNA1A-235ENST00000637004 TRPM2O94759 1503 aa19.59■□□□□ 0.73
CACNA1A-235ENST00000637004 BCL2L13Q9BXK5 485 aa19.59■□□□□ 0.73
CACNA1A-235ENST00000637004 PTMSP20962 102 aa19.58■□□□□ 0.73
CACNA1A-235ENST00000637004 ZNF692Q9BU19 519 aaPredicted RBP19.58■□□□□ 0.73
CACNA1A-235ENST00000637004 ZKSCAN2Q63HK3 967 aa19.58■□□□□ 0.72
CACNA1A-235ENST00000637004 FTSJ3Q8IY81 847 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-235ENST00000637004 INO80Q9ULG1 1556 aaPredicted RBP19.58■□□□□ 0.72
CACNA1A-235ENST00000637004 CIZ1Q9ULV3 898 aaPredicted RBP19.57■□□□□ 0.72
CACNA1A-235ENST00000637004 RRP7AQ9Y3A4 280 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-235ENST00000637004 ERVK-7P63135 1459 aa19.57■□□□□ 0.72
CACNA1A-235ENST00000637004 SKOR2Q2VWA4 1001 aaPredicted RBP19.57■□□□□ 0.72
CACNA1A-235ENST00000637004 NCBP3Q53F19 620 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-235ENST00000637004 GBP4Q96PP9 640 aa19.57■□□□□ 0.72
CACNA1A-235ENST00000637004 CEP152O94986 1710 aa19.57■□□□□ 0.72
CACNA1A-235ENST00000637004 NCOA3Q9Y6Q9 1424 aa19.57■□□□□ 0.72
CACNA1A-235ENST00000637004 IQSEC2Q5JU85 1478 aa19.56■□□□□ 0.72
CACNA1A-235ENST00000637004 HDAC1Q13547 482 aaPredicted RBP19.56■□□□□ 0.72
CACNA1A-235ENST00000637004 DZIP1LQ8IYY4 767 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-235ENST00000637004 TPM2P07951 284 aa19.56■□□□□ 0.72
CACNA1A-235ENST00000637004 SNX21Q969T3 373 aa19.56■□□□□ 0.72
CACNA1A-235ENST00000637004 KIAA1210Q9ULL0 1709 aa19.55■□□□□ 0.72
CACNA1A-235ENST00000637004 DDIT3P35638 169 aa19.55■□□□□ 0.72
CACNA1A-235ENST00000637004 MORC1Q86VD1 984 aa19.55■□□□□ 0.72
CACNA1A-235ENST00000637004 PTPRTO14522 1441 aa19.55■□□□□ 0.72
CACNA1A-235ENST00000637004 CT47B1P0C2W7 299 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-235ENST00000637004 ESF1Q9H501 851 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-235ENST00000637004 ARHGEF40Q8TER5 1519 aa19.54■□□□□ 0.72
CACNA1A-235ENST00000637004 ERBB4Q15303 1308 aa19.53■□□□□ 0.72
CACNA1A-235ENST00000637004 KDM4FA0A1W2PPD8 638 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms