RNA–Protein interactions for RNA: ENST00000636974.1

CACNA1A-233, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,783 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-233	ENST00000636974	USP32	Q8NFA0	1604 aa		10.62	□□□□□ -0.71
CACNA1A-233	ENST00000636974	POLR3A	O14802	1390 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNA1A-233	ENST00000636974	MS4A1	P11836	297 aa		10.62	□□□□□ -0.71
CACNA1A-233	ENST00000636974	GOLGA2	Q08379	1002 aa		10.62	□□□□□ -0.71
CACNA1A-233	ENST00000636974	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNA1A-233	ENST00000636974	VGF	O15240	615 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNA1A-233	ENST00000636974	DIP2C	Q9Y2E4	1556 aa		10.61	□□□□□ -0.71
CACNA1A-233	ENST00000636974	NSD2	O96028	1365 aa		10.6	□□□□□ -0.71
CACNA1A-233	ENST00000636974	NINL	Q9Y2I6	1382 aa		10.6	□□□□□ -0.71
CACNA1A-233	ENST00000636974	GLI2	P10070	1586 aa		10.6	□□□□□ -0.71
CACNA1A-233	ENST00000636974	CDCA7L	Q96GN5	454 aa		10.6	□□□□□ -0.71
CACNA1A-233	ENST00000636974	SLC52A1	Q9NWF4	448 aa		10.6	□□□□□ -0.71
CACNA1A-233	ENST00000636974	ANP32A	P39687	249 aa	Known RBP	10.59	□□□□□ -0.71
CACNA1A-233	ENST00000636974	DUSP27	Q5VZP5	1158 aa		10.59	□□□□□ -0.71
CACNA1A-233	ENST00000636974	EXOC6	Q8TAG9	804 aa		10.59	□□□□□ -0.71
CACNA1A-233	ENST00000636974	PLEKHH1	Q9ULM0	1364 aa		10.58	□□□□□ -0.72
CACNA1A-233	ENST00000636974	MSH5	O43196	834 aa		10.58	□□□□□ -0.72
CACNA1A-233	ENST00000636974	GGT6	Q6P531	493 aa		10.58	□□□□□ -0.72
CACNA1A-233	ENST00000636974	TRMT2A	Q8IZ69	625 aa	Known RBP	10.57	□□□□□ -0.72
CACNA1A-233	ENST00000636974	SALL2	Q9Y467	1007 aa	Predicted RBP	10.57	□□□□□ -0.72
CACNA1A-233	ENST00000636974	RIMBP3C	A6NJZ7	1639 aa		10.57	□□□□□ -0.72
CACNA1A-233	ENST00000636974	RIMBP3B	A6NNM3	1639 aa		10.57	□□□□□ -0.72
CACNA1A-233	ENST00000636974	RIMBP3	Q9UFD9	1639 aa		10.57	□□□□□ -0.72
CACNA1A-233	ENST00000636974	NEXMIF	Q5QGS0	1516 aa		10.57	□□□□□ -0.72
CACNA1A-233	ENST00000636974	QRICH2	Q9H0J4	1663 aa		10.57	□□□□□ -0.72
CACNA1A-233	ENST00000636974		E9PSI1	815 aa		10.57	□□□□□ -0.72
CACNA1A-233	ENST00000636974	SLFN5	Q08AF3	891 aa		10.57	□□□□□ -0.72
CACNA1A-233	ENST00000636974	RICTOR	Q6R327	1708 aa		10.57	□□□□□ -0.72
CACNA1A-233	ENST00000636974	NKTR	P30414	1462 aa	Known RBP	10.56	□□□□□ -0.72
CACNA1A-233	ENST00000636974	EVC2	Q86UK5	1308 aa		10.56	□□□□□ -0.72
CACNA1A-233	ENST00000636974	ECM2	O94769	699 aa	Predicted RBP	10.56	□□□□□ -0.72
CACNA1A-233	ENST00000636974	CARD14	Q9BXL6	1004 aa		10.56	□□□□□ -0.72
CACNA1A-233	ENST00000636974	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.56	□□□□□ -0.72
CACNA1A-233	ENST00000636974	CGNL1	Q0VF96	1302 aa		10.55	□□□□□ -0.72
CACNA1A-233	ENST00000636974	CHGA	P10645	457 aa	Known RBP	10.55	□□□□□ -0.72
CACNA1A-233	ENST00000636974	ANKRD36B	Q8N2N9	1353 aa		10.55	□□□□□ -0.72
CACNA1A-233	ENST00000636974	NSD3	Q9BZ95	1437 aa		10.55	□□□□□ -0.72
CACNA1A-233	ENST00000636974	RERE	Q9P2R6	1566 aa		10.54	□□□□□ -0.72
CACNA1A-233	ENST00000636974	AAMP	Q13685	434 aa		10.53	□□□□□ -0.72
CACNA1A-233	ENST00000636974	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.53	□□□□□ -0.72
CACNA1A-233	ENST00000636974	MORC1	Q86VD1	984 aa		10.53	□□□□□ -0.72
CACNA1A-233	ENST00000636974	CFAP53	Q96M91	514 aa		10.53	□□□□□ -0.72
CACNA1A-233	ENST00000636974	IPO9	Q96P70	1041 aa	Known RBP	10.53	□□□□□ -0.72
CACNA1A-233	ENST00000636974	TRAK1	Q9UPV9	953 aa		10.53	□□□□□ -0.72
CACNA1A-233	ENST00000636974	NOP58	Q9Y2X3	529 aa	Known RBP	10.53	□□□□□ -0.72
CACNA1A-233	ENST00000636974	SENP3-EIF4A1	A0A087X0R7	540 aa		10.52	□□□□□ -0.72
CACNA1A-233	ENST00000636974	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.52	□□□□□ -0.72
CACNA1A-233	ENST00000636974	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.52	□□□□□ -0.73
CACNA1A-233	ENST00000636974	SIGLEC1	Q9BZZ2	1709 aa		10.52	□□□□□ -0.73
CACNA1A-233	ENST00000636974	RAPGEF3	O95398	923 aa		10.52	□□□□□ -0.73
CACNA1A-233	ENST00000636974	CCDC27	Q2M243	656 aa		10.52	□□□□□ -0.73
CACNA1A-233	ENST00000636974	CRBN	Q96SW2	442 aa		10.52	□□□□□ -0.73
CACNA1A-233	ENST00000636974	AGL	P35573	1532 aa		10.52	□□□□□ -0.73
CACNA1A-233	ENST00000636974	ATAD2	Q6PL18	1390 aa		10.51	□□□□□ -0.73
CACNA1A-233	ENST00000636974	APAF1	O14727	1248 aa		10.51	□□□□□ -0.73
CACNA1A-233	ENST00000636974	MED14	O60244	1454 aa		10.51	□□□□□ -0.73
CACNA1A-233	ENST00000636974	TULP4	Q9NRJ4	1543 aa		10.5	□□□□□ -0.73
CACNA1A-233	ENST00000636974	CYB5RL	Q6IPT4	315 aa		10.5	□□□□□ -0.73
CACNA1A-233	ENST00000636974	RUNDC1	Q96C34	613 aa		10.5	□□□□□ -0.73
CACNA1A-233	ENST00000636974	KDM2B	Q8NHM5	1336 aa		10.5	□□□□□ -0.73
CACNA1A-233	ENST00000636974	PDE3A	Q14432	1141 aa		10.49	□□□□□ -0.73
CACNA1A-233	ENST00000636974	PROM2	Q8N271	834 aa		10.49	□□□□□ -0.73
CACNA1A-233	ENST00000636974	BACH2	Q9BYV9	841 aa		10.49	□□□□□ -0.73
CACNA1A-233	ENST00000636974	IQSEC2	Q5JU85	1478 aa		10.49	□□□□□ -0.73
CACNA1A-233	ENST00000636974	PREX1	Q8TCU6	1659 aa		10.49	□□□□□ -0.73
CACNA1A-233	ENST00000636974	TMEM131L	A2VDJ0	1609 aa		10.49	□□□□□ -0.73
CACNA1A-233	ENST00000636974	PDE4A	P27815	886 aa		10.49	□□□□□ -0.73
CACNA1A-233	ENST00000636974	IDI1	Q13907	227 aa		10.49	□□□□□ -0.73
CACNA1A-233	ENST00000636974	WDR63	Q8IWG1	891 aa		10.49	□□□□□ -0.73
CACNA1A-233	ENST00000636974	ABCC11	Q96J66	1382 aa		10.48	□□□□□ -0.73
CACNA1A-233	ENST00000636974	YEATS2	Q9ULM3	1422 aa		10.48	□□□□□ -0.73
CACNA1A-233	ENST00000636974	SHPRH	Q149N8	1683 aa		10.48	□□□□□ -0.73
CACNA1A-233	ENST00000636974	SPDYE4	A6NLX3	237 aa		10.48	□□□□□ -0.73
CACNA1A-233	ENST00000636974	PLIN1	O60240	522 aa		10.48	□□□□□ -0.73
CACNA1A-233	ENST00000636974	SLC12A5	Q9H2X9	1139 aa		10.48	□□□□□ -0.73
CACNA1A-233	ENST00000636974	TMEM132E	Q6IEE7	984 aa		10.47	□□□□□ -0.73
CACNA1A-233	ENST00000636974	WWC1	Q8IX03	1113 aa		10.47	□□□□□ -0.73
CACNA1A-233	ENST00000636974	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.47	□□□□□ -0.73
CACNA1A-233	ENST00000636974	CLTC	Q00610	1675 aa	Known RBP	10.47	□□□□□ -0.73
CACNA1A-233	ENST00000636974	RGL2	O15211	777 aa		10.47	□□□□□ -0.73
CACNA1A-233	ENST00000636974	CT47B1	P0C2W7	299 aa	Predicted RBP	10.47	□□□□□ -0.73
CACNA1A-233	ENST00000636974	CCDC146	Q8IYE0	955 aa		10.47	□□□□□ -0.73
CACNA1A-233	ENST00000636974	PTPRM	P28827	1452 aa		10.46	□□□□□ -0.73
CACNA1A-233	ENST00000636974	DLC1	Q96QB1	1528 aa		10.46	□□□□□ -0.73
CACNA1A-233	ENST00000636974	TERF2IP	Q9NYB0	399 aa		10.46	□□□□□ -0.74
CACNA1A-233	ENST00000636974	DDRGK1	Q96HY6	314 aa		10.45	□□□□□ -0.74
CACNA1A-233	ENST00000636974	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.45	□□□□□ -0.74
CACNA1A-233	ENST00000636974	DIP2B	Q9P265	1576 aa		10.45	□□□□□ -0.74
CACNA1A-233	ENST00000636974	MYH16	Q9H6N6	1097 aa		10.44	□□□□□ -0.74
CACNA1A-233	ENST00000636974	ADGRB2	O60241	1585 aa		10.44	□□□□□ -0.74
CACNA1A-233	ENST00000636974	ZMYM3	Q14202	1370 aa		10.44	□□□□□ -0.74
CACNA1A-233	ENST00000636974	MTHFS	P49914	203 aa		10.44	□□□□□ -0.74
CACNA1A-233	ENST00000636974	C20orf194	Q5TEA3	1177 aa		10.44	□□□□□ -0.74
CACNA1A-233	ENST00000636974	PNN	Q9H307	717 aa	Known RBP	10.44	□□□□□ -0.74
CACNA1A-233	ENST00000636974	SPATA31D1	Q6ZQQ2	1576 aa		10.43	□□□□□ -0.74
CACNA1A-233	ENST00000636974		A0A1W2PP64	1363 aa		10.43	□□□□□ -0.74
CACNA1A-233	ENST00000636974	BRPF1	P55201	1214 aa	Predicted RBP	10.43	□□□□□ -0.74
CACNA1A-233	ENST00000636974	TCP11L2	Q8N4U5	519 aa		10.42	□□□□□ -0.74
CACNA1A-233	ENST00000636974	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.42	□□□□□ -0.74
CACNA1A-233	ENST00000636974	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms