RNA–Protein interactions for RNA: ENST00000636903.1

SMARCA2-254, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-254ENST00000636903 EID1Q9Y6B2 187 aa18.55■□□□□ 0.56
SMARCA2-254ENST00000636903 ADAMTS13Q76LX8 1427 aa18.54■□□□□ 0.56
SMARCA2-254ENST00000636903 TNNT2P45379 298 aaPredicted RBP18.54■□□□□ 0.56
SMARCA2-254ENST00000636903 THEMISQ8N1K5 641 aaPredicted RBP18.54■□□□□ 0.56
SMARCA2-254ENST00000636903 CDK19Q9BWU1 502 aa18.54■□□□□ 0.56
SMARCA2-254ENST00000636903 NCKAP5LQ9HCH0 1330 aa18.53■□□□□ 0.56
SMARCA2-254ENST00000636903 LRPPRCP42704 1394 aaKnown RBP18.53■□□□□ 0.56
SMARCA2-254ENST00000636903 NUTM2FA1L443 756 aa18.52■□□□□ 0.56
SMARCA2-254ENST00000636903 ADAMTSL3P82987 1691 aa18.52■□□□□ 0.56
SMARCA2-254ENST00000636903 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
SMARCA2-254ENST00000636903 ROBO2Q9HCK4 1378 aa18.5■□□□□ 0.55
SMARCA2-254ENST00000636903 RBM33Q96EV2 1170 aaKnown RBP18.49■□□□□ 0.55
SMARCA2-254ENST00000636903 NSD3Q9BZ95 1437 aa18.49■□□□□ 0.55
SMARCA2-254ENST00000636903 ABCC11Q96J66 1382 aa18.49■□□□□ 0.55
SMARCA2-254ENST00000636903 PLEKHG1Q9ULL1 1385 aa18.49■□□□□ 0.55
SMARCA2-254ENST00000636903 SLC24A1O60721 1099 aa18.49■□□□□ 0.55
SMARCA2-254ENST00000636903 NLRP13Q86W25 1043 aa18.49■□□□□ 0.55
SMARCA2-254ENST00000636903 PTPRUQ92729 1446 aa18.48■□□□□ 0.55
SMARCA2-254ENST00000636903 CEP170BQ9Y4F5 1589 aaPredicted RBP18.48■□□□□ 0.55
SMARCA2-254ENST00000636903 CABP1Q9NZU7 370 aa18.48■□□□□ 0.55
SMARCA2-254ENST00000636903 PPP2R1AP30153 589 aa18.47■□□□□ 0.55
SMARCA2-254ENST00000636903 SALL2Q9Y467 1007 aaPredicted RBP18.47■□□□□ 0.55
SMARCA2-254ENST00000636903 AMOTL2Q9Y2J4 779 aa18.46■□□□□ 0.55
SMARCA2-254ENST00000636903 ARHGAP23Q9P227 1491 aa18.46■□□□□ 0.55
SMARCA2-254ENST00000636903 SLIT1O75093 1534 aa18.46■□□□□ 0.54
SMARCA2-254ENST00000636903 A0A1W2PP64 1363 aa18.44■□□□□ 0.54
SMARCA2-254ENST00000636903 BRD4O60885 1362 aaPredicted RBP18.44■□□□□ 0.54
SMARCA2-254ENST00000636903 WASLO00401 505 aaPredicted RBP18.42■□□□□ 0.54
SMARCA2-254ENST00000636903 GGNBP2Q9H3C7 697 aa18.41■□□□□ 0.54
SMARCA2-254ENST00000636903 MED14O60244 1454 aa18.41■□□□□ 0.54
SMARCA2-254ENST00000636903 KCNA6P17658 529 aa18.41■□□□□ 0.54
SMARCA2-254ENST00000636903 DLC1Q96QB1 1528 aa18.4■□□□□ 0.54
SMARCA2-254ENST00000636903 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMARCA2-254ENST00000636903 ANKLE2Q86XL3 938 aa18.4■□□□□ 0.54
SMARCA2-254ENST00000636903 ANKRD36BQ8N2N9 1353 aa18.4■□□□□ 0.54
SMARCA2-254ENST00000636903 FBLN1P23142 703 aa18.39■□□□□ 0.53
SMARCA2-254ENST00000636903 SETD1BQ9UPS6 1966 aaKnown RBP18.39■□□□□ 0.53
SMARCA2-254ENST00000636903 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
SMARCA2-254ENST00000636903 CD163L1Q9NR16 1453 aa18.39■□□□□ 0.53
SMARCA2-254ENST00000636903 MORC1Q86VD1 984 aa18.39■□□□□ 0.53
SMARCA2-254ENST00000636903 PRR36Q9H6K5 1346 aa18.38■□□□□ 0.53
SMARCA2-254ENST00000636903 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
SMARCA2-254ENST00000636903 NUDT16Q96DE0 195 aaKnown RBP18.38■□□□□ 0.53
SMARCA2-254ENST00000636903 TECPR2O15040 1411 aa18.37■□□□□ 0.53
SMARCA2-254ENST00000636903 HSPA2P54652 639 aa18.37■□□□□ 0.53
SMARCA2-254ENST00000636903 ADAMTS8Q9UP79 889 aa18.37■□□□□ 0.53
SMARCA2-254ENST00000636903 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.36■□□□□ 0.53
SMARCA2-254ENST00000636903 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
SMARCA2-254ENST00000636903 PUS7Q96PZ0 661 aaKnown RBP18.35■□□□□ 0.53
SMARCA2-254ENST00000636903 CPS1P31327 1500 aa18.35■□□□□ 0.53
SMARCA2-254ENST00000636903 FAM135BQ49AJ0 1406 aa18.34■□□□□ 0.53
SMARCA2-254ENST00000636903 ZRANB1Q9UGI0 708 aa18.34■□□□□ 0.53
SMARCA2-254ENST00000636903 TERF2IPQ9NYB0 399 aa18.34■□□□□ 0.53
SMARCA2-254ENST00000636903 PPIP5K1Q6PFW1 1433 aa18.34■□□□□ 0.53
SMARCA2-254ENST00000636903 FYB1O15117 783 aa18.33■□□□□ 0.53
SMARCA2-254ENST00000636903 NPC1L1Q9UHC9 1359 aa18.33■□□□□ 0.53
SMARCA2-254ENST00000636903 KDM4FA0A1W2PPD8 638 aa18.32■□□□□ 0.52
SMARCA2-254ENST00000636903 HDGFL2Q7Z4V5 671 aaPredicted RBP18.32■□□□□ 0.52
SMARCA2-254ENST00000636903 CCDC146Q8IYE0 955 aa18.32■□□□□ 0.52
SMARCA2-254ENST00000636903 KNDC1Q76NI1 1749 aa18.32■□□□□ 0.52
SMARCA2-254ENST00000636903 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
SMARCA2-254ENST00000636903 ZBED9Q6R2W3 1325 aa18.31■□□□□ 0.52
SMARCA2-254ENST00000636903 MTHFSP49914 203 aa18.31■□□□□ 0.52
SMARCA2-254ENST00000636903 SIRT1Q96EB6 747 aa18.3■□□□□ 0.52
SMARCA2-254ENST00000636903 CCDC61Q9Y6R9 512 aa18.3■□□□□ 0.52
SMARCA2-254ENST00000636903 ZNF142P52746 1687 aaPredicted RBP18.3■□□□□ 0.52
SMARCA2-254ENST00000636903 NME9Q86XW9 330 aa18.29■□□□□ 0.52
SMARCA2-254ENST00000636903 WDR43Q15061 677 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMARCA2-254ENST00000636903 ATP7BP35670 1465 aa18.28■□□□□ 0.52
SMARCA2-254ENST00000636903 IRX6P78412 446 aaPredicted RBP18.27■□□□□ 0.51
SMARCA2-254ENST00000636903 SUPT16HQ9Y5B9 1047 aaKnown RBP18.27■□□□□ 0.51
SMARCA2-254ENST00000636903 NINLQ9Y2I6 1382 aa18.26■□□□□ 0.51
SMARCA2-254ENST00000636903 NPHP4O75161 1426 aaPredicted RBP18.25■□□□□ 0.51
SMARCA2-254ENST00000636903 PPM1GO15355 546 aaPredicted RBP18.25■□□□□ 0.51
SMARCA2-254ENST00000636903 ACEP12821 1306 aa18.25■□□□□ 0.51
SMARCA2-254ENST00000636903 CDCA7LQ96GN5 454 aa18.24■□□□□ 0.51
SMARCA2-254ENST00000636903 RGPD8O14715 1765 aaPredicted RBP18.23■□□□□ 0.51
SMARCA2-254ENST00000636903 XRN1Q8IZH2 1706 aaKnown RBP18.23■□□□□ 0.51
SMARCA2-254ENST00000636903 NKTRP30414 1462 aaKnown RBP18.23■□□□□ 0.51
SMARCA2-254ENST00000636903 CPSF1Q10570 1443 aaKnown RBP18.23■□□□□ 0.51
SMARCA2-254ENST00000636903 PTCH1Q13635 1447 aa18.23■□□□□ 0.51
SMARCA2-254ENST00000636903 SOX12O15370 315 aa18.22■□□□□ 0.51
SMARCA2-254ENST00000636903 DIP2AQ14689 1571 aa18.22■□□□□ 0.51
SMARCA2-254ENST00000636903 FKBP8Q14318 412 aa18.21■□□□□ 0.51
SMARCA2-254ENST00000636903 C14orf37Q86TY3 774 aa18.21■□□□□ 0.51
SMARCA2-254ENST00000636903 USP32Q8NFA0 1604 aa18.21■□□□□ 0.5
SMARCA2-254ENST00000636903 CHD2O14647 1828 aaKnown RBP18.19■□□□□ 0.5
SMARCA2-254ENST00000636903 APAF1O14727 1248 aa18.18■□□□□ 0.5
SMARCA2-254ENST00000636903 RRS1Q15050 365 aaKnown RBP18.18■□□□□ 0.5
SMARCA2-254ENST00000636903 NUTM2GQ5VZR2 741 aa18.18■□□□□ 0.5
SMARCA2-254ENST00000636903 EMILIN1Q9Y6C2 1016 aa18.18■□□□□ 0.5
SMARCA2-254ENST00000636903 BLMP54132 1417 aaPredicted RBP18.18■□□□□ 0.5
SMARCA2-254ENST00000636903 NEUROD2Q15784 382 aa18.17■□□□□ 0.5
SMARCA2-254ENST00000636903 NGDNQ8NEJ9 315 aaKnown RBP18.17■□□□□ 0.5
SMARCA2-254ENST00000636903 CDC42BPGQ6DT37 1551 aa18.17■□□□□ 0.5
SMARCA2-254ENST00000636903 NSD2O96028 1365 aa18.17■□□□□ 0.5
SMARCA2-254ENST00000636903 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
SMARCA2-254ENST00000636903 RRP7AQ9Y3A4 280 aaKnown RBP18.17■□□□□ 0.5
SMARCA2-254ENST00000636903 POLR3AO14802 1390 aaPredicted RBP18.17■□□□□ 0.5
SMARCA2-254ENST00000636903 PLEKHG5O94827 1062 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms