RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 ARHGAP31Q2M1Z3 1444 aa20.9■□□□□ 0.94
CHRNA7-221ENST00000636898 ARHGEF28Q8N1W1 1705 aaKnown RBP20.9■□□□□ 0.94
CHRNA7-221ENST00000636898 BCL11AQ9H165 835 aa20.9■□□□□ 0.94
CHRNA7-221ENST00000636898 WWC1Q8IX03 1113 aa20.89■□□□□ 0.93
CHRNA7-221ENST00000636898 SLC12A5Q9H2X9 1139 aa20.89■□□□□ 0.93
CHRNA7-221ENST00000636898 VGFO15240 615 aaPredicted RBP20.89■□□□□ 0.93
CHRNA7-221ENST00000636898 DDRGK1Q96HY6 314 aa20.89■□□□□ 0.93
CHRNA7-221ENST00000636898 CGNL1Q0VF96 1302 aa20.88■□□□□ 0.93
CHRNA7-221ENST00000636898 NSD2O96028 1365 aa20.88■□□□□ 0.93
CHRNA7-221ENST00000636898 DIP2CQ9Y2E4 1556 aa20.88■□□□□ 0.93
CHRNA7-221ENST00000636898 DEKP35659 375 aaKnown RBP20.88■□□□□ 0.93
CHRNA7-221ENST00000636898 IQSEC2Q5JU85 1478 aa20.87■□□□□ 0.93
CHRNA7-221ENST00000636898 PDE3AQ14432 1141 aa20.87■□□□□ 0.93
CHRNA7-221ENST00000636898 TMEM132EQ6IEE7 984 aa20.87■□□□□ 0.93
CHRNA7-221ENST00000636898 ZFYVE9O95405 1425 aa20.86■□□□□ 0.93
CHRNA7-221ENST00000636898 SKAP1Q86WV1 359 aa20.86■□□□□ 0.93
CHRNA7-221ENST00000636898 RUNDC1Q96C34 613 aa20.86■□□□□ 0.93
CHRNA7-221ENST00000636898 DMRT2Q9Y5R5 561 aa20.86■□□□□ 0.93
CHRNA7-221ENST00000636898 EVC2Q86UK5 1308 aa20.86■□□□□ 0.93
CHRNA7-221ENST00000636898 BCAR3O75815 825 aa20.85■□□□□ 0.93
CHRNA7-221ENST00000636898 NCBP3Q53F19 620 aaKnown RBP20.85■□□□□ 0.93
CHRNA7-221ENST00000636898 PHF23Q9BUL5 403 aaPredicted RBP20.85■□□□□ 0.93
CHRNA7-221ENST00000636898 ANKRD36BQ8N2N9 1353 aa20.85■□□□□ 0.93
CHRNA7-221ENST00000636898 TULP4Q9NRJ4 1543 aa20.85■□□□□ 0.93
CHRNA7-221ENST00000636898 RTL5Q5HYW3 569 aaPredicted RBP20.85■□□□□ 0.93
CHRNA7-221ENST00000636898 FAM161AQ3B820 660 aa20.84■□□□□ 0.93
CHRNA7-221ENST00000636898 RICTORQ6R327 1708 aa20.83■□□□□ 0.92
CHRNA7-221ENST00000636898 CFAP53Q96M91 514 aa20.82■□□□□ 0.92
CHRNA7-221ENST00000636898 CCDC27Q2M243 656 aa20.82■□□□□ 0.92
CHRNA7-221ENST00000636898 WDR63Q8IWG1 891 aa20.82■□□□□ 0.92
CHRNA7-221ENST00000636898 RAPGEF3O95398 923 aa20.8■□□□□ 0.92
CHRNA7-221ENST00000636898 SLC52A1Q9NWF4 448 aa20.8■□□□□ 0.92
CHRNA7-221ENST00000636898 USP35Q9P2H5 1018 aa20.8■□□□□ 0.92
CHRNA7-221ENST00000636898 MTHFSP49914 203 aa20.79■□□□□ 0.92
CHRNA7-221ENST00000636898 C8orf34Q49A92 452 aa20.79■□□□□ 0.92
CHRNA7-221ENST00000636898 TCP11L2Q8N4U5 519 aa20.79■□□□□ 0.92
CHRNA7-221ENST00000636898 AAMPQ13685 434 aa20.79■□□□□ 0.92
CHRNA7-221ENST00000636898 TNNT2P45379 298 aaPredicted RBP20.78■□□□□ 0.92
CHRNA7-221ENST00000636898 PPM1GO15355 546 aaPredicted RBP20.77■□□□□ 0.92
CHRNA7-221ENST00000636898 IDI1Q13907 227 aa20.76■□□□□ 0.91
CHRNA7-221ENST00000636898 ADGRB2O60241 1585 aa20.75■□□□□ 0.91
CHRNA7-221ENST00000636898 CLUAP1Q96AJ1 413 aa20.75■□□□□ 0.91
CHRNA7-221ENST00000636898 ABCC11Q96J66 1382 aa20.75■□□□□ 0.91
CHRNA7-221ENST00000636898 CANXP27824 592 aaKnown RBP20.74■□□□□ 0.91
CHRNA7-221ENST00000636898 RARSP54136 660 aaKnown RBP20.74■□□□□ 0.91
CHRNA7-221ENST00000636898 PREX1Q8TCU6 1659 aa20.74■□□□□ 0.91
CHRNA7-221ENST00000636898 TMEM131LA2VDJ0 1609 aa20.74■□□□□ 0.91
CHRNA7-221ENST00000636898 VIRMAQ69YN4 1812 aaKnown RBP20.74■□□□□ 0.91
CHRNA7-221ENST00000636898 MYO5BQ9ULV0 1848 aa20.72■□□□□ 0.91
CHRNA7-221ENST00000636898 CLTCQ00610 1675 aaKnown RBP20.72■□□□□ 0.91
CHRNA7-221ENST00000636898 NEUROD2Q15784 382 aa20.71■□□□□ 0.91
CHRNA7-221ENST00000636898 NUTM2DQ5VT03 806 aaPredicted RBP20.71■□□□□ 0.91
CHRNA7-221ENST00000636898 CABP2Q9NPB3 220 aa20.71■□□□□ 0.91
CHRNA7-221ENST00000636898 RRP7AQ9Y3A4 280 aaKnown RBP20.71■□□□□ 0.91
CHRNA7-221ENST00000636898 MED14O60244 1454 aa20.71■□□□□ 0.91
CHRNA7-221ENST00000636898 PTPRMP28827 1452 aa20.71■□□□□ 0.91
CHRNA7-221ENST00000636898 IGHDP01880 384 aa20.71■□□□□ 0.91
CHRNA7-221ENST00000636898 RGS3P49796 1198 aa20.71■□□□□ 0.91
CHRNA7-221ENST00000636898 MYH16Q9H6N6 1097 aa20.71■□□□□ 0.91
CHRNA7-221ENST00000636898 MAPK8IP3Q9UPT6 1336 aa20.71■□□□□ 0.91
CHRNA7-221ENST00000636898 ATAD2Q6PL18 1390 aa20.71■□□□□ 0.91
CHRNA7-221ENST00000636898 PANK1Q8TE04 598 aa20.7■□□□□ 0.9
CHRNA7-221ENST00000636898 ANKRD26Q9UPS8 1709 aa20.7■□□□□ 0.9
CHRNA7-221ENST00000636898 A0A1W2PP64 1363 aa20.7■□□□□ 0.9
CHRNA7-221ENST00000636898 YEATS2Q9ULM3 1422 aa20.7■□□□□ 0.9
CHRNA7-221ENST00000636898 COG6Q9Y2V7 657 aa20.69■□□□□ 0.9
CHRNA7-221ENST00000636898 LAS1LQ9Y4W2 734 aaKnown RBP20.69■□□□□ 0.9
CHRNA7-221ENST00000636898 NEFMP07197 916 aa20.68■□□□□ 0.9
CHRNA7-221ENST00000636898 CT47B1P0C2W7 299 aaPredicted RBP20.68■□□□□ 0.9
CHRNA7-221ENST00000636898 U2AF1L5P0DN76 240 aaPredicted RBP20.67■□□□□ 0.9
CHRNA7-221ENST00000636898 U2AF1Q01081 240 aaKnown RBP eCLIP20.67■□□□□ 0.9
CHRNA7-221ENST00000636898 ZMYM3Q14202 1370 aa20.67■□□□□ 0.9
CHRNA7-221ENST00000636898 PMFBP1Q8TBY8 1022 aa20.66■□□□□ 0.9
CHRNA7-221ENST00000636898 FRAT1Q92837 279 aaPredicted RBP20.66■□□□□ 0.9
CHRNA7-221ENST00000636898 COL3A1P02461 1466 aaPredicted RBP20.66■□□□□ 0.9
CHRNA7-221ENST00000636898 YTHDC2Q9H6S0 1430 aaKnown RBP20.66■□□□□ 0.9
CHRNA7-221ENST00000636898 TERF2IPQ9NYB0 399 aa20.65■□□□□ 0.9
CHRNA7-221ENST00000636898 DAXXQ9UER7 740 aaPredicted RBP20.65■□□□□ 0.9
CHRNA7-221ENST00000636898 SRPK2P78362 688 aaKnown RBP20.65■□□□□ 0.9
CHRNA7-221ENST00000636898 NLRP1Q9C000 1473 aa20.63■□□□□ 0.89
CHRNA7-221ENST00000636898 CD163L1Q9NR16 1453 aa20.63■□□□□ 0.89
CHRNA7-221ENST00000636898 SAFB2Q14151 953 aaKnown RBP eCLIP20.62■□□□□ 0.89
CHRNA7-221ENST00000636898 STK26Q9P289 416 aa20.62■□□□□ 0.89
CHRNA7-221ENST00000636898 PLEKHF1Q96S99 279 aa20.62■□□□□ 0.89
CHRNA7-221ENST00000636898 ALKQ9UM73 1620 aa20.61■□□□□ 0.89
CHRNA7-221ENST00000636898 RLBP1P12271 317 aa20.6■□□□□ 0.89
CHRNA7-221ENST00000636898 PRAM1Q96QH2 718 aa20.6■□□□□ 0.89
CHRNA7-221ENST00000636898 FYB1O15117 783 aa20.59■□□□□ 0.89
CHRNA7-221ENST00000636898 IL16Q14005 1332 aa20.59■□□□□ 0.89
CHRNA7-221ENST00000636898 ARHGEF40Q8TER5 1519 aa20.59■□□□□ 0.89
CHRNA7-221ENST00000636898 GGNBP2Q9H3C7 697 aa20.58■□□□□ 0.89
CHRNA7-221ENST00000636898 POGKQ9P215 609 aa20.58■□□□□ 0.89
CHRNA7-221ENST00000636898 REREQ9P2R6 1566 aa20.58■□□□□ 0.89
CHRNA7-221ENST00000636898 PCDHB15Q9Y5E8 787 aa20.58■□□□□ 0.88
CHRNA7-221ENST00000636898 PNPLA6Q8IY17 1366 aa20.57■□□□□ 0.88
CHRNA7-221ENST00000636898 TMPOP42166 694 aaKnown RBP20.57■□□□□ 0.88
CHRNA7-221ENST00000636898 KIF20BQ96Q89 1820 aa20.57■□□□□ 0.88
CHRNA7-221ENST00000636898 MINK1Q8N4C8 1332 aaPredicted RBP20.57■□□□□ 0.88
CHRNA7-221ENST00000636898 ZKSCAN2Q63HK3 967 aa20.57■□□□□ 0.88
CHRNA7-221ENST00000636898 PPP6R1Q9UPN7 881 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms