RNA–Protein interactions for RNA: ENST00000636753.1

RYR3-222, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-222	ENST00000636753	NBR1	Q14596	966 aa		4	□□□□□ -1.77
RYR3-222	ENST00000636753	SCUBE3	Q8IX30	993 aa		4	□□□□□ -1.77
RYR3-222	ENST00000636753	ZFP42	Q96MM3	310 aa		4	□□□□□ -1.77
RYR3-222	ENST00000636753	CAPN5	O15484	640 aa	Predicted RBP	3.99	□□□□□ -1.77
RYR3-222	ENST00000636753	KRT76	Q01546	638 aa		3.99	□□□□□ -1.77
RYR3-222	ENST00000636753	DCAF5	Q96JK2	942 aa		3.99	□□□□□ -1.77
RYR3-222	ENST00000636753	CNTNAP3B	Q96NU0	1288 aa		3.99	□□□□□ -1.77
RYR3-222	ENST00000636753	KRTAP17-1	Q9BYP8	105 aa		3.99	□□□□□ -1.77
RYR3-222	ENST00000636753	CNTNAP3	Q9BZ76	1288 aa		3.99	□□□□□ -1.77
RYR3-222	ENST00000636753	PPFIA3	O75145	1194 aa		3.96	□□□□□ -1.78
RYR3-222	ENST00000636753	SLURP2	P0DP57	97 aa		3.96	□□□□□ -1.78
RYR3-222	ENST00000636753	BAG6	P46379	1132 aa		3.96	□□□□□ -1.78
RYR3-222	ENST00000636753	TTC13	Q8NBP0	860 aa		3.96	□□□□□ -1.78
RYR3-222	ENST00000636753	TRIM32	Q13049	653 aa		3.95	□□□□□ -1.78
RYR3-222	ENST00000636753	EYA1	Q99502	592 aa		3.95	□□□□□ -1.78
RYR3-222	ENST00000636753	CFH	P08603	1231 aa		3.94	□□□□□ -1.78
RYR3-222	ENST00000636753	GPR161	Q8N6U8	529 aa	Known RBP	3.94	□□□□□ -1.78
RYR3-222	ENST00000636753	WHAMM	Q8TF30	809 aa		3.94	□□□□□ -1.78
RYR3-222	ENST00000636753	RYDEN	Q9NUL5	291 aa	Known RBP	3.94	□□□□□ -1.78
RYR3-222	ENST00000636753	PHF20L1	A8MW92	1017 aa		3.93	□□□□□ -1.78
RYR3-222	ENST00000636753	DPYSL4	O14531	572 aa		3.93	□□□□□ -1.78
RYR3-222	ENST00000636753	COBL	O75128	1261 aa		3.93	□□□□□ -1.78
RYR3-222	ENST00000636753	ECM2	O94769	699 aa	Predicted RBP	3.93	□□□□□ -1.78
RYR3-222	ENST00000636753	ALDH1A1	P00352	501 aa		3.93	□□□□□ -1.78
RYR3-222	ENST00000636753	FURIN	P09958	794 aa		3.93	□□□□□ -1.78
RYR3-222	ENST00000636753	SOBP	A7XYQ1	873 aa		3.92	□□□□□ -1.78
RYR3-222	ENST00000636753	RGL2	O15211	777 aa		3.92	□□□□□ -1.78
RYR3-222	ENST00000636753	SCARF1	Q14162	830 aa		3.92	□□□□□ -1.78
RYR3-222	ENST00000636753	RC3H1	Q5TC82	1133 aa	Known RBP	3.92	□□□□□ -1.78
RYR3-222	ENST00000636753	COL25A1	Q9BXS0	654 aa	Predicted RBP	3.91	□□□□□ -1.78
RYR3-222	ENST00000636753	CAMK2B	Q13554	666 aa		3.9	□□□□□ -1.79
RYR3-222	ENST00000636753	MRPL14	Q6P1L8	145 aa	Known RBP	3.9	□□□□□ -1.79
RYR3-222	ENST00000636753	FAM160A2	Q8N612	972 aa	Predicted RBP	3.9	□□□□□ -1.79
RYR3-222	ENST00000636753	DNAJB2	P25686	324 aa		3.89	□□□□□ -1.79
RYR3-222	ENST00000636753	THAP11	Q96EK4	314 aa		3.89	□□□□□ -1.79
RYR3-222	ENST00000636753	ARID1B	Q8NFD5	2236 aa	Predicted RBP	3.89	□□□□□ -1.79
RYR3-222	ENST00000636753	MAN1A2	O60476	641 aa		3.88	□□□□□ -1.79
RYR3-222	ENST00000636753	WNT7B	P56706	349 aa		3.88	□□□□□ -1.79
RYR3-222	ENST00000636753	PUS10	Q3MIT2	529 aa	Known RBP	3.88	□□□□□ -1.79
RYR3-222	ENST00000636753	PADI6	Q6TGC4	694 aa		3.88	□□□□□ -1.79
RYR3-222	ENST00000636753	BEND7	Q8N7W2	519 aa	Predicted RBP	3.88	□□□□□ -1.79
RYR3-222	ENST00000636753	PURB	Q96QR8	312 aa	Known RBP	3.88	□□□□□ -1.79
RYR3-222	ENST00000636753	TMEM134	Q9H6X4	195 aa		3.88	□□□□□ -1.79
RYR3-222	ENST00000636753	WASF2	Q9Y6W5	498 aa		3.88	□□□□□ -1.79
RYR3-222	ENST00000636753	SLC10A3	P09131	477 aa		3.87	□□□□□ -1.79
RYR3-222	ENST00000636753	PRIM1	P49642	420 aa	Known RBP	3.87	□□□□□ -1.79
RYR3-222	ENST00000636753	RNFT1	Q5M7Z0	435 aa		3.87	□□□□□ -1.79
RYR3-222	ENST00000636753	ZMYM1	Q5SVZ6	1142 aa		3.87	□□□□□ -1.79
RYR3-222	ENST00000636753	HS6ST3	Q8IZP7	471 aa		3.87	□□□□□ -1.79
RYR3-222	ENST00000636753	ENAM	Q9NRM1	1142 aa		3.87	□□□□□ -1.79
RYR3-222	ENST00000636753	SIAH2	O43255	324 aa		3.86	□□□□□ -1.79
RYR3-222	ENST00000636753	FMNL1	O95466	1100 aa	Predicted RBP	3.86	□□□□□ -1.79
RYR3-222	ENST00000636753	MAP3K10	Q02779	954 aa		3.86	□□□□□ -1.79
RYR3-222	ENST00000636753	NANOS1	Q8WY41	292 aa	Known RBP	3.86	□□□□□ -1.79
RYR3-222	ENST00000636753	CDHR5	Q9HBB8	845 aa		3.86	□□□□□ -1.79
RYR3-222	ENST00000636753	CNTNAP5	Q8WYK1	1306 aa		3.86	□□□□□ -1.79
RYR3-222	ENST00000636753	SKOR1	P84550	965 aa		3.85	□□□□□ -1.79
RYR3-222	ENST00000636753	PRDM9	Q9NQV7	894 aa		3.85	□□□□□ -1.79
RYR3-222	ENST00000636753	SALL2	Q9Y467	1007 aa	Predicted RBP	3.85	□□□□□ -1.79
RYR3-222	ENST00000636753	LAMC2	Q13753	1193 aa		3.84	□□□□□ -1.79
RYR3-222	ENST00000636753	PDIA6	Q15084	440 aa		3.84	□□□□□ -1.79
RYR3-222	ENST00000636753	MSS51	Q4VC12	460 aa		3.84	□□□□□ -1.79
RYR3-222	ENST00000636753	LYPD4	Q6UWN0	246 aa		3.84	□□□□□ -1.79
RYR3-222	ENST00000636753	SPDYE16	A6NNV3	312 aa	Predicted RBP	3.83	□□□□□ -1.8
RYR3-222	ENST00000636753	YBX3	P16989	372 aa	Known RBP eCLIP	3.83	□□□□□ -1.8
RYR3-222	ENST00000636753	ITGB7	P26010	798 aa		3.83	□□□□□ -1.8
RYR3-222	ENST00000636753	MORN1	Q5T089	497 aa		3.83	□□□□□ -1.8
RYR3-222	ENST00000636753	KRTAP5-3	Q6L8H2	238 aa		3.83	□□□□□ -1.8
RYR3-222	ENST00000636753	PODN	Q7Z5L7	613 aa		3.83	□□□□□ -1.8
RYR3-222	ENST00000636753	NPDC1	Q9NQX5	325 aa	Predicted RBP	3.83	□□□□□ -1.8
RYR3-222	ENST00000636753	CELA2B	P08218	269 aa	Predicted RBP	3.82	□□□□□ -1.8
RYR3-222	ENST00000636753	FECH	P22830	423 aa		3.82	□□□□□ -1.8
RYR3-222	ENST00000636753	DNAJC5	Q9H3Z4	198 aa		3.82	□□□□□ -1.8
RYR3-222	ENST00000636753	SCO2	A0A1W2PP80	73 aa		3.81	□□□□□ -1.8
RYR3-222	ENST00000636753	KRBA1	A5PL33	1030 aa		3.81	□□□□□ -1.8
RYR3-222	ENST00000636753	ADAMTS2	O95450	1211 aa		3.81	□□□□□ -1.8
RYR3-222	ENST00000636753	NKX1-1	Q15270	411 aa	Predicted RBP	3.81	□□□□□ -1.8
RYR3-222	ENST00000636753	BRICD5	Q6PL45	260 aa		3.81	□□□□□ -1.8
RYR3-222	ENST00000636753	RBM46	Q8TBY0	533 aa	Known RBP	3.81	□□□□□ -1.8
RYR3-222	ENST00000636753	KRTAP4-11	Q9BYQ6	195 aa		3.81	□□□□□ -1.8
RYR3-222	ENST00000636753	KRTAP4-5	Q9BYR2	181 aa		3.81	□□□□□ -1.8
RYR3-222	ENST00000636753	MMP16	P51512	607 aa		3.8	□□□□□ -1.8
RYR3-222	ENST00000636753	ARTN	Q5T4W7	220 aa		3.8	□□□□□ -1.8
RYR3-222	ENST00000636753	RSPH4A	Q5TD94	716 aa		3.8	□□□□□ -1.8
RYR3-222	ENST00000636753	NBPF11	Q86T75	865 aa		3.8	□□□□□ -1.8
RYR3-222	ENST00000636753	ZFP64	Q9NPA5	681 aa		3.8	□□□□□ -1.8
RYR3-222	ENST00000636753	RCCD1	A6NED2	376 aa		3.79	□□□□□ -1.8
RYR3-222	ENST00000636753	GRXCR2	A6NFK2	248 aa		3.79	□□□□□ -1.8
RYR3-222	ENST00000636753	OSBP	P22059	807 aa		3.79	□□□□□ -1.8
RYR3-222	ENST00000636753	ALYREF	Q86V81	257 aa	Known RBP	3.79	□□□□□ -1.8
RYR3-222	ENST00000636753	EHBP1	Q8NDI1	1231 aa		3.79	□□□□□ -1.8
RYR3-222	ENST00000636753	SEMA6B	Q9H3T3	888 aa		3.79	□□□□□ -1.8
RYR3-222	ENST00000636753	SLC27A5	Q9Y2P5	690 aa		3.79	□□□□□ -1.8
RYR3-222	ENST00000636753	TIMP2	P16035	220 aa		3.78	□□□□□ -1.8
RYR3-222	ENST00000636753	TXK	P42681	527 aa		3.78	□□□□□ -1.8
RYR3-222	ENST00000636753	SRSF11	Q05519	484 aa	Known RBP	3.78	□□□□□ -1.8
RYR3-222	ENST00000636753	FZD5	Q13467	585 aa		3.78	□□□□□ -1.8
RYR3-222	ENST00000636753	ATP6V1A	P38606	617 aa		3.77	□□□□□ -1.81
RYR3-222	ENST00000636753	ADH1C	P00326	375 aa		3.76	□□□□□ -1.81
RYR3-222	ENST00000636753	WDR4	P57081	412 aa	Known RBP	3.76	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms