RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 ATN1P54259 1190 aaPredicted RBP5.85□□□□□ -1.47
CLN5-214ENST00000636705 GZF1Q9H116 711 aaPredicted RBP5.85□□□□□ -1.47
CLN5-214ENST00000636705 CABP2Q9NPB3 220 aa5.85□□□□□ -1.47
CLN5-214ENST00000636705 NLRP1Q9C000 1473 aa5.84□□□□□ -1.47
CLN5-214ENST00000636705 ARHGAP35Q9NRY4 1499 aa5.84□□□□□ -1.47
CLN5-214ENST00000636705 TRIM35Q9UPQ4 493 aa5.84□□□□□ -1.47
CLN5-214ENST00000636705 CEP170BQ9Y4F5 1589 aaPredicted RBP5.84□□□□□ -1.48
CLN5-214ENST00000636705 PDE4DQ08499 809 aa5.83□□□□□ -1.48
CLN5-214ENST00000636705 PUS7Q96PZ0 661 aaKnown RBP5.83□□□□□ -1.48
CLN5-214ENST00000636705 EID1Q9Y6B2 187 aa5.83□□□□□ -1.48
CLN5-214ENST00000636705 ABCA6Q8N139 1617 aa5.83□□□□□ -1.48
CLN5-214ENST00000636705 SAMD9LQ8IVG5 1584 aa5.83□□□□□ -1.48
CLN5-214ENST00000636705 FYCO1Q9BQS8 1478 aa5.83□□□□□ -1.48
CLN5-214ENST00000636705 MTUS2Q5JR59 1369 aa5.83□□□□□ -1.48
CLN5-214ENST00000636705 PLEKHG3A1L390 1219 aa5.83□□□□□ -1.48
CLN5-214ENST00000636705 SLC39A7Q92504 469 aa5.83□□□□□ -1.48
CLN5-214ENST00000636705 PREX2Q70Z35 1606 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 MIA2Q96PC5 1412 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 ZNF316A6NFI3 1004 aaPredicted RBP5.82□□□□□ -1.48
CLN5-214ENST00000636705 KIF3BO15066 747 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 IRF5Q13568 498 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 EFCAB3Q8N7B9 438 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 ATP7AQ04656 1500 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 GPATCH8Q9UKJ3 1502 aaKnown RBP5.82□□□□□ -1.48
CLN5-214ENST00000636705 NPHP4O75161 1426 aaPredicted RBP5.82□□□□□ -1.48
CLN5-214ENST00000636705 SIGLEC1Q9BZZ2 1709 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 MED14O60244 1454 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 ZNF142P52746 1687 aaPredicted RBP5.82□□□□□ -1.48
CLN5-214ENST00000636705 TRIM66O15016 1216 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 POTEIP0CG38 1075 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 C7P10643 843 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 HDGFP51858 240 aaKnown RBP5.82□□□□□ -1.48
CLN5-214ENST00000636705 NLRP6P59044 892 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 RETREG2Q8NC44 543 aa5.82□□□□□ -1.48
CLN5-214ENST00000636705 MED1Q15648 1581 aaPredicted RBP5.81□□□□□ -1.48
CLN5-214ENST00000636705 PZPP20742 1482 aa5.81□□□□□ -1.48
CLN5-214ENST00000636705 ITSN2Q9NZM3 1697 aa5.8□□□□□ -1.48
CLN5-214ENST00000636705 FLIIQ13045 1269 aa5.8□□□□□ -1.48
CLN5-214ENST00000636705 E2F4Q16254 413 aa5.8□□□□□ -1.48
CLN5-214ENST00000636705 KIDINS220Q9ULH0 1771 aa5.8□□□□□ -1.48
CLN5-214ENST00000636705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.8□□□□□ -1.48
CLN5-214ENST00000636705 A6NJR5 290 aa5.79□□□□□ -1.48
CLN5-214ENST00000636705 HMGB1P09429 215 aaKnown RBP5.79□□□□□ -1.48
CLN5-214ENST00000636705 RBM26Q5T8P6 1007 aaKnown RBP5.79□□□□□ -1.48
CLN5-214ENST00000636705 PLXNC1O60486 1568 aa5.79□□□□□ -1.48
CLN5-214ENST00000636705 MYO3AQ8NEV4 1616 aa5.79□□□□□ -1.48
CLN5-214ENST00000636705 FAM135BQ49AJ0 1406 aa5.79□□□□□ -1.48
CLN5-214ENST00000636705 SYCP2Q9BX26 1530 aa5.79□□□□□ -1.48
CLN5-214ENST00000636705 KDM5DQ9BY66 1539 aa5.78□□□□□ -1.48
CLN5-214ENST00000636705 MFRPQ9BY79 579 aa5.78□□□□□ -1.48
CLN5-214ENST00000636705 CDC42BPBQ9Y5S2 1711 aa5.78□□□□□ -1.48
CLN5-214ENST00000636705 UGGT1Q9NYU2 1555 aa5.78□□□□□ -1.48
CLN5-214ENST00000636705 DNMT1P26358 1616 aaKnown RBP5.78□□□□□ -1.48
CLN5-214ENST00000636705 IRX5P78411 483 aaPredicted RBP5.78□□□□□ -1.48
CLN5-214ENST00000636705 KRI1Q8N9T8 703 aaKnown RBP5.78□□□□□ -1.48
CLN5-214ENST00000636705 FBXO22Q8NEZ5 403 aa5.78□□□□□ -1.48
CLN5-214ENST00000636705 OCEL1Q9H607 264 aa5.78□□□□□ -1.48
CLN5-214ENST00000636705 DEPDC5O75140 1603 aa5.78□□□□□ -1.48
CLN5-214ENST00000636705 ADGBQ8N7X0 1667 aa5.78□□□□□ -1.48
CLN5-214ENST00000636705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.77□□□□□ -1.49
CLN5-214ENST00000636705 CEP162Q5TB80 1403 aa5.77□□□□□ -1.49
CLN5-214ENST00000636705 FBXO31Q5XUX0 539 aaPredicted RBP5.77□□□□□ -1.49
CLN5-214ENST00000636705 ZNF772Q68DY9 489 aaPredicted RBP5.77□□□□□ -1.49
CLN5-214ENST00000636705 TXNDC2Q86VQ3 553 aa5.77□□□□□ -1.49
CLN5-214ENST00000636705 USP35Q9P2H5 1018 aa5.77□□□□□ -1.49
CLN5-214ENST00000636705 PHF8Q9UPP1 1060 aa5.77□□□□□ -1.49
CLN5-214ENST00000636705 CCDC141Q6ZP82 1450 aa5.77□□□□□ -1.49
CLN5-214ENST00000636705 INO80Q9ULG1 1556 aaPredicted RBP5.77□□□□□ -1.49
CLN5-214ENST00000636705 LRRC9Q6ZRR7 1453 aa5.76□□□□□ -1.49
CLN5-214ENST00000636705 E9PSI1 815 aa5.76□□□□□ -1.49
CLN5-214ENST00000636705 PLCG2P16885 1265 aa5.76□□□□□ -1.49
CLN5-214ENST00000636705 KCNA6P17658 529 aa5.76□□□□□ -1.49
CLN5-214ENST00000636705 METRNQ9UJH8 293 aa5.76□□□□□ -1.49
CLN5-214ENST00000636705 CLTCQ00610 1675 aaKnown RBP5.76□□□□□ -1.49
CLN5-214ENST00000636705 MBD5Q9P267 1494 aa5.76□□□□□ -1.49
CLN5-214ENST00000636705 KANK1Q14678 1352 aa5.76□□□□□ -1.49
CLN5-214ENST00000636705 SYNMO15061 1565 aa5.75□□□□□ -1.49
CLN5-214ENST00000636705 SEC24BO95487 1268 aa5.75□□□□□ -1.49
CLN5-214ENST00000636705 LRRC7Q96NW7 1537 aa5.75□□□□□ -1.49
CLN5-214ENST00000636705 SUPT6HQ7KZ85 1726 aaKnown RBP5.75□□□□□ -1.49
CLN5-214ENST00000636705 NCOA3Q9Y6Q9 1424 aa5.74□□□□□ -1.49
CLN5-214ENST00000636705 SPATA31A6Q5VVP1 1343 aa5.74□□□□□ -1.49
CLN5-214ENST00000636705 VWDEQ8N2E2 1590 aa5.74□□□□□ -1.49
CLN5-214ENST00000636705 PROSER2Q86WR7 435 aaPredicted RBP5.74□□□□□ -1.49
CLN5-214ENST00000636705 GPIHBP1Q8IV16 184 aa5.74□□□□□ -1.49
CLN5-214ENST00000636705 DHX37Q8IY37 1157 aaKnown RBP5.74□□□□□ -1.49
CLN5-214ENST00000636705 PDCD7Q8N8D1 485 aaKnown RBP5.74□□□□□ -1.49
CLN5-214ENST00000636705 POM121Q96HA1 1249 aa5.74□□□□□ -1.49
CLN5-214ENST00000636705 EHBP1L1Q8N3D4 1523 aa5.74□□□□□ -1.49
CLN5-214ENST00000636705 SCAF11Q99590 1463 aaKnown RBP5.74□□□□□ -1.49
CLN5-214ENST00000636705 RNF17Q9BXT8 1623 aaKnown RBP5.74□□□□□ -1.49
CLN5-214ENST00000636705 FBXW7Q969H0 707 aa5.74□□□□□ -1.49
CLN5-214ENST00000636705 L3MBTL3Q96JM7 780 aaPredicted RBP5.74□□□□□ -1.49
CLN5-214ENST00000636705 MS4A4AQ96JQ5 239 aa5.74□□□□□ -1.49
CLN5-214ENST00000636705 SLC52A1Q9NWF4 448 aa5.74□□□□□ -1.49
CLN5-214ENST00000636705 ARHGAP31Q2M1Z3 1444 aa5.73□□□□□ -1.49
CLN5-214ENST00000636705 MSH6P52701 1360 aa5.73□□□□□ -1.49
CLN5-214ENST00000636705 JCADQ9P266 1359 aa5.73□□□□□ -1.49
CLN5-214ENST00000636705 CDC42BPAQ5VT25 1732 aa5.73□□□□□ -1.49
CLN5-214ENST00000636705 MLLT3P42568 568 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms