RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 LRP5O75197 1615 aa23.89■■□□□ 1.42
CACNA1A-229ENST00000636670 BLMP54132 1417 aaPredicted RBP23.89■■□□□ 1.41
CACNA1A-229ENST00000636670 SOS2Q07890 1332 aaPredicted RBP23.87■■□□□ 1.41
CACNA1A-229ENST00000636670 XRN1Q8IZH2 1706 aaKnown RBP23.87■■□□□ 1.41
CACNA1A-229ENST00000636670 NRXN3Q9Y4C0 1643 aa23.86■■□□□ 1.41
CACNA1A-229ENST00000636670 ADGRL3Q9HAR2 1447 aa23.85■■□□□ 1.41
CACNA1A-229ENST00000636670 GJD4Q96KN9 370 aaPredicted RBP23.85■■□□□ 1.41
CACNA1A-229ENST00000636670 DEFB132Q7Z7B7 95 aa23.83■■□□□ 1.41
CACNA1A-229ENST00000636670 LAMC1P11047 1609 aa23.83■■□□□ 1.41
CACNA1A-229ENST00000636670 SPATA31E1Q6ZUB1 1445 aa23.83■■□□□ 1.4
CACNA1A-229ENST00000636670 C1orf167Q5SNV9 1468 aa23.82■■□□□ 1.4
CACNA1A-229ENST00000636670 BCL9LQ86UU0 1499 aa23.82■■□□□ 1.4
CACNA1A-229ENST00000636670 SF3B2Q13435 895 aaKnown RBP23.81■■□□□ 1.4
CACNA1A-229ENST00000636670 ANKRD30BQ9BXX2 1392 aa23.8■■□□□ 1.4
CACNA1A-229ENST00000636670 METP08581 1390 aa23.78■■□□□ 1.4
CACNA1A-229ENST00000636670 ORAI2Q96SN7 254 aa23.77■■□□□ 1.4
CACNA1A-229ENST00000636670 COL22A1Q8NFW1 1626 aaPredicted RBP23.77■■□□□ 1.4
CACNA1A-229ENST00000636670 ZNF326Q5BKZ1 582 aaKnown RBP23.76■■□□□ 1.39
CACNA1A-229ENST00000636670 NALCNQ8IZF0 1738 aa23.74■■□□□ 1.39
CACNA1A-229ENST00000636670 RPGRIP1LQ68CZ1 1315 aa23.74■■□□□ 1.39
CACNA1A-229ENST00000636670 MYOM2P54296 1465 aa23.74■■□□□ 1.39
CACNA1A-229ENST00000636670 PSDA5PKW4 1024 aaPredicted RBP23.7■■□□□ 1.38
CACNA1A-229ENST00000636670 UNC5CLQ8IV45 518 aa23.69■■□□□ 1.38
CACNA1A-229ENST00000636670 MARF1Q9Y4F3 1742 aaKnown RBP23.68■■□□□ 1.38
CACNA1A-229ENST00000636670 RALGAPBQ86X10 1494 aa23.68■■□□□ 1.38
CACNA1A-229ENST00000636670 DHX57Q6P158 1386 aaKnown RBP23.67■■□□□ 1.38
CACNA1A-229ENST00000636670 GLI3P10071 1580 aa23.66■■□□□ 1.38
CACNA1A-229ENST00000636670 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.66■■□□□ 1.38
CACNA1A-229ENST00000636670 NPHP3Q7Z494 1330 aa23.65■■□□□ 1.38
CACNA1A-229ENST00000636670 NRXN1Q9ULB1 1477 aa23.65■■□□□ 1.38
CACNA1A-229ENST00000636670 SEPT12Q8IYM1 358 aa23.65■■□□□ 1.38
CACNA1A-229ENST00000636670 VGFO15240 615 aaPredicted RBP23.64■■□□□ 1.37
CACNA1A-229ENST00000636670 PIK3C2GO75747 1445 aa23.63■■□□□ 1.37
CACNA1A-229ENST00000636670 BAG6P46379 1132 aa23.63■■□□□ 1.37
CACNA1A-229ENST00000636670 KNDC1Q76NI1 1749 aa23.62■■□□□ 1.37
CACNA1A-229ENST00000636670 BRWD3Q6RI45 1802 aa23.62■■□□□ 1.37
CACNA1A-229ENST00000636670 SLIT2O94813 1529 aa23.62■■□□□ 1.37
CACNA1A-229ENST00000636670 YY1P25490 414 aa23.61■■□□□ 1.37
CACNA1A-229ENST00000636670 RGL3Q3MIN7 710 aa23.6■■□□□ 1.37
CACNA1A-229ENST00000636670 ESCO1Q5FWF5 840 aa23.59■■□□□ 1.37
CACNA1A-229ENST00000636670 KRT27Q7Z3Y8 459 aa23.59■■□□□ 1.37
CACNA1A-229ENST00000636670 PRAG1Q86YV5 1406 aa23.59■■□□□ 1.37
CACNA1A-229ENST00000636670 PXDNQ92626 1479 aa23.58■■□□□ 1.37
CACNA1A-229ENST00000636670 ONECUT3O60422 494 aaPredicted RBP23.58■■□□□ 1.37
CACNA1A-229ENST00000636670 ROBO2Q9HCK4 1378 aa23.56■■□□□ 1.36
CACNA1A-229ENST00000636670 FOXO3O43524 673 aa23.56■■□□□ 1.36
CACNA1A-229ENST00000636670 KIAA1210Q9ULL0 1709 aa23.55■■□□□ 1.36
CACNA1A-229ENST00000636670 ADGRF5Q8IZF2 1346 aa23.55■■□□□ 1.36
CACNA1A-229ENST00000636670 LRPPRCP42704 1394 aaKnown RBP23.54■■□□□ 1.36
CACNA1A-229ENST00000636670 XPCQ01831 940 aaPredicted RBP23.54■■□□□ 1.36
CACNA1A-229ENST00000636670 VPS72Q15906 364 aa23.54■■□□□ 1.36
CACNA1A-229ENST00000636670 R3HDM1Q15032 1099 aaKnown RBP23.52■■□□□ 1.36
CACNA1A-229ENST00000636670 PCGF6Q9BYE7 350 aa23.51■■□□□ 1.35
CACNA1A-229ENST00000636670 EN1Q05925 392 aaPredicted RBP23.5■■□□□ 1.35
CACNA1A-229ENST00000636670 STAC3Q96MF2 364 aa23.5■■□□□ 1.35
CACNA1A-229ENST00000636670 CCDC9Q9Y3X0 531 aaKnown RBP23.49■■□□□ 1.35
CACNA1A-229ENST00000636670 ADGRB1O14514 1584 aa23.46■■□□□ 1.35
CACNA1A-229ENST00000636670 TECPR2O15040 1411 aa23.46■■□□□ 1.35
CACNA1A-229ENST00000636670 SPATA31A3Q5VYP0 1347 aa23.46■■□□□ 1.35
CACNA1A-229ENST00000636670 USP32Q8NFA0 1604 aa23.44■■□□□ 1.34
CACNA1A-229ENST00000636670 CDC42BPGQ6DT37 1551 aa23.44■■□□□ 1.34
CACNA1A-229ENST00000636670 A0A0G2JS52 829 aa23.43■■□□□ 1.34
CACNA1A-229ENST00000636670 HAP1P54257 671 aaPredicted RBP23.43■■□□□ 1.34
CACNA1A-229ENST00000636670 MYT1Q01538 1121 aa23.43■■□□□ 1.34
CACNA1A-229ENST00000636670 DCAF11Q8TEB1 546 aa23.43■■□□□ 1.34
CACNA1A-229ENST00000636670 TRPM1Q7Z4N2 1603 aa23.41■■□□□ 1.34
CACNA1A-229ENST00000636670 YTHDC2Q9H6S0 1430 aaKnown RBP23.41■■□□□ 1.34
CACNA1A-229ENST00000636670 DLC1Q96QB1 1528 aa23.4■■□□□ 1.34
CACNA1A-229ENST00000636670 ARHGEF28Q8N1W1 1705 aaKnown RBP23.4■■□□□ 1.34
CACNA1A-229ENST00000636670 C14orf93Q9H972 538 aaKnown RBP23.4■■□□□ 1.34
CACNA1A-229ENST00000636670 NWD2Q9ULI1 1742 aa23.39■■□□□ 1.34
CACNA1A-229ENST00000636670 SIN3AQ96ST3 1273 aa23.39■■□□□ 1.33
CACNA1A-229ENST00000636670 RGPD1P0DJD0 1748 aa23.39■■□□□ 1.33
CACNA1A-229ENST00000636670 DCAF8L1A6NGE4 600 aa23.38■■□□□ 1.33
CACNA1A-229ENST00000636670 DISP2A7MBM2 1401 aa23.38■■□□□ 1.33
CACNA1A-229ENST00000636670 NUTM2FA1L443 756 aa23.37■■□□□ 1.33
CACNA1A-229ENST00000636670 FAM98CQ17RN3 349 aaKnown RBP23.36■■□□□ 1.33
CACNA1A-229ENST00000636670 KRT28Q7Z3Y7 464 aa23.36■■□□□ 1.33
CACNA1A-229ENST00000636670 KDM2AQ9Y2K7 1162 aa23.36■■□□□ 1.33
CACNA1A-229ENST00000636670 ABCC11Q96J66 1382 aa23.36■■□□□ 1.33
CACNA1A-229ENST00000636670 EZH2Q15910 746 aaKnown RBP23.35■■□□□ 1.33
CACNA1A-229ENST00000636670 CFAP70Q5T0N1 1121 aa23.35■■□□□ 1.33
CACNA1A-229ENST00000636670 PLCH1Q4KWH8 1693 aa23.35■■□□□ 1.33
CACNA1A-229ENST00000636670 CLSPNQ9HAW4 1339 aa23.34■■□□□ 1.33
CACNA1A-229ENST00000636670 CABLES1Q8TDN4 633 aa23.34■■□□□ 1.33
CACNA1A-229ENST00000636670 TONSLQ96HA7 1378 aa23.32■■□□□ 1.32
CACNA1A-229ENST00000636670 NEUROD1Q13562 356 aa23.32■■□□□ 1.32
CACNA1A-229ENST00000636670 ADGRB2O60241 1585 aa23.31■■□□□ 1.32
CACNA1A-229ENST00000636670 FAM83GA6ND36 823 aa23.31■■□□□ 1.32
CACNA1A-229ENST00000636670 PSME1Q06323 249 aa23.31■■□□□ 1.32
CACNA1A-229ENST00000636670 IFFO2Q5TF58 517 aa23.31■■□□□ 1.32
CACNA1A-229ENST00000636670 L3MBTL2Q969R5 705 aa23.31■■□□□ 1.32
CACNA1A-229ENST00000636670 CAMKK2Q96RR4 588 aa23.31■■□□□ 1.32
CACNA1A-229ENST00000636670 FAM182BQ5T319 152 aa23.3■■□□□ 1.32
CACNA1A-229ENST00000636670 TMEM132EQ6IEE7 984 aa23.3■■□□□ 1.32
CACNA1A-229ENST00000636670 FMN2Q9NZ56 1722 aa23.3■■□□□ 1.32
CACNA1A-229ENST00000636670 TNS3Q68CZ2 1445 aa23.29■■□□□ 1.32
CACNA1A-229ENST00000636670 KIF1AQ12756 1690 aa23.28■■□□□ 1.32
CACNA1A-229ENST00000636670 PLEKHG5O94827 1062 aa23.27■■□□□ 1.32
CACNA1A-229ENST00000636670 PARD3Q8TEW0 1356 aa23.27■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms