RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 NBPF8Q3BBV2 869 aa9.5□□□□□ -0.89
SMARCA2-252ENST00000636559 VPS37DQ86XT2 251 aa9.5□□□□□ -0.89
SMARCA2-252ENST00000636559 SLC12A5Q9H2X9 1139 aa9.5□□□□□ -0.89
SMARCA2-252ENST00000636559 MARCH6O60337 910 aa9.5□□□□□ -0.89
SMARCA2-252ENST00000636559 ZKSCAN1P17029 563 aaPredicted RBP9.5□□□□□ -0.89
SMARCA2-252ENST00000636559 AKAP17AQ02040 695 aaKnown RBP9.5□□□□□ -0.89
SMARCA2-252ENST00000636559 SYNE3Q6ZMZ3 975 aa9.5□□□□□ -0.89
SMARCA2-252ENST00000636559 AMOTL1Q8IY63 956 aa9.5□□□□□ -0.89
SMARCA2-252ENST00000636559 RPGRIP1LQ68CZ1 1315 aa9.49□□□□□ -0.89
SMARCA2-252ENST00000636559 PRKAR2BP31323 418 aa9.49□□□□□ -0.89
SMARCA2-252ENST00000636559 ZNF692Q9BU19 519 aaPredicted RBP9.49□□□□□ -0.89
SMARCA2-252ENST00000636559 POGZQ7Z3K3 1410 aa9.49□□□□□ -0.89
SMARCA2-252ENST00000636559 ARHGEF11O15085 1522 aa9.49□□□□□ -0.89
SMARCA2-252ENST00000636559 AAMPQ13685 434 aa9.49□□□□□ -0.89
SMARCA2-252ENST00000636559 CABP1Q9NZU7 370 aa9.49□□□□□ -0.89
SMARCA2-252ENST00000636559 MAGI1Q96QZ7 1491 aaPredicted RBP9.49□□□□□ -0.89
SMARCA2-252ENST00000636559 DDX11L8A8MPP1 907 aa9.48□□□□□ -0.89
SMARCA2-252ENST00000636559 APPP05067 770 aa9.48□□□□□ -0.89
SMARCA2-252ENST00000636559 PLEKHO1Q53GL0 409 aaPredicted RBP9.48□□□□□ -0.89
SMARCA2-252ENST00000636559 VPS53Q5VIR6 699 aa9.48□□□□□ -0.89
SMARCA2-252ENST00000636559 PANK1Q8TE04 598 aa9.48□□□□□ -0.89
SMARCA2-252ENST00000636559 ATP6V1DQ9Y5K8 247 aa9.48□□□□□ -0.89
SMARCA2-252ENST00000636559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMARCA2-252ENST00000636559 SMG6Q86US8 1419 aaKnown RBP9.48□□□□□ -0.89
SMARCA2-252ENST00000636559 PCF11O94913 1555 aaKnown RBP9.48□□□□□ -0.89
SMARCA2-252ENST00000636559 ANKRD30BQ9BXX2 1392 aa9.48□□□□□ -0.89
SMARCA2-252ENST00000636559 UBTFL1P0CB47 393 aaPredicted RBP9.48□□□□□ -0.89
SMARCA2-252ENST00000636559 CPLX2Q6PUV4 134 aaKnown RBP9.48□□□□□ -0.89
SMARCA2-252ENST00000636559 ANKLE2Q86XL3 938 aa9.47□□□□□ -0.89
SMARCA2-252ENST00000636559 ANO2Q9NQ90 1003 aa9.47□□□□□ -0.89
SMARCA2-252ENST00000636559 CCDC141Q6ZP82 1450 aa9.47□□□□□ -0.89
SMARCA2-252ENST00000636559 RTEL1-TNFRSF6BF6WH68 1400 aa9.47□□□□□ -0.89
SMARCA2-252ENST00000636559 CCDC30Q5VVM6 783 aa9.47□□□□□ -0.89
SMARCA2-252ENST00000636559 LNPKQ9C0E8 428 aa9.47□□□□□ -0.89
SMARCA2-252ENST00000636559 ERC2O15083 957 aa9.47□□□□□ -0.89
SMARCA2-252ENST00000636559 RNF20Q5VTR2 975 aa9.47□□□□□ -0.89
SMARCA2-252ENST00000636559 USP35Q9P2H5 1018 aa9.47□□□□□ -0.89
SMARCA2-252ENST00000636559 SLC4A3P48751 1232 aa9.47□□□□□ -0.89
SMARCA2-252ENST00000636559 CREBRFQ8IUR6 639 aa9.47□□□□□ -0.89
SMARCA2-252ENST00000636559 TRIM34Q9BYJ4 488 aa9.47□□□□□ -0.89
SMARCA2-252ENST00000636559 SLC26A8Q96RN1 970 aa9.46□□□□□ -0.89
SMARCA2-252ENST00000636559 GRIN2AQ12879 1464 aa9.46□□□□□ -0.89
SMARCA2-252ENST00000636559 INTS3Q68E01 1043 aaKnown RBP9.46□□□□□ -0.89
SMARCA2-252ENST00000636559 KIF14Q15058 1648 aa9.46□□□□□ -0.9
SMARCA2-252ENST00000636559 PLB1Q6P1J6 1458 aa9.46□□□□□ -0.9
SMARCA2-252ENST00000636559 TRDNQ13061 729 aa9.46□□□□□ -0.9
SMARCA2-252ENST00000636559 CD109Q6YHK3 1445 aa9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 MCTP1Q6DN14 999 aa9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 CAMSAP2Q08AD1 1489 aa9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 FOXD4L6Q3SYB3 417 aaPredicted RBP9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 FOXD4L3Q6VB84 417 aaPredicted RBP9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 CDCA7LQ96GN5 454 aa9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 NEUROD6Q96NK8 337 aa9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 NAIPQ13075 1403 aa9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 STRN4Q9NRL3 753 aa9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 TATP17735 454 aaPredicted RBP9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 EXOSC9Q06265 439 aaKnown RBP9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 TRIM29Q14134 588 aa9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 NCBP3Q53F19 620 aaKnown RBP9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 SULT6B1Q6IMI4 303 aa9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 FBXW7Q969H0 707 aa9.45□□□□□ -0.9
SMARCA2-252ENST00000636559 DNAJC5BQ9UF47 199 aa9.44□□□□□ -0.9
SMARCA2-252ENST00000636559 DDX49Q9Y6V7 483 aaKnown RBP9.44□□□□□ -0.9
SMARCA2-252ENST00000636559 GNAI3P08754 354 aa9.44□□□□□ -0.9
SMARCA2-252ENST00000636559 RBM33Q96EV2 1170 aaKnown RBP9.44□□□□□ -0.9
SMARCA2-252ENST00000636559 CPLX1O14810 134 aa9.44□□□□□ -0.9
SMARCA2-252ENST00000636559 TWISTNBQ3B726 338 aaPredicted RBP9.44□□□□□ -0.9
SMARCA2-252ENST00000636559 PTPN23Q9H3S7 1636 aa9.44□□□□□ -0.9
SMARCA2-252ENST00000636559 RAD21O60216 631 aa9.44□□□□□ -0.9
SMARCA2-252ENST00000636559 ATAD2Q6PL18 1390 aa9.44□□□□□ -0.9
SMARCA2-252ENST00000636559 SKOR2Q2VWA4 1001 aaPredicted RBP9.43□□□□□ -0.9
SMARCA2-252ENST00000636559 AMER1Q5JTC6 1135 aaPredicted RBP9.42□□□□□ -0.9
SMARCA2-252ENST00000636559 ADGRL1O94910 1474 aa9.42□□□□□ -0.9
SMARCA2-252ENST00000636559 KIF6Q6ZMV9 814 aa9.42□□□□□ -0.9
SMARCA2-252ENST00000636559 RBM42Q9BTD8 480 aaKnown RBP9.42□□□□□ -0.9
SMARCA2-252ENST00000636559 TPD52L1Q16890 204 aaPredicted RBP9.42□□□□□ -0.9
SMARCA2-252ENST00000636559 ERICH2A1L162 156 aa9.42□□□□□ -0.9
SMARCA2-252ENST00000636559 NFXL1Q6ZNB6 911 aa9.42□□□□□ -0.9
SMARCA2-252ENST00000636559 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
SMARCA2-252ENST00000636559 URB2Q14146 1524 aaKnown RBP9.42□□□□□ -0.9
SMARCA2-252ENST00000636559 TOM1L2Q6ZVM7 507 aa9.41□□□□□ -0.9
SMARCA2-252ENST00000636559 TSR2Q969E8 191 aaKnown RBP9.41□□□□□ -0.9
SMARCA2-252ENST00000636559 NINLQ9Y2I6 1382 aa9.41□□□□□ -0.9
SMARCA2-252ENST00000636559 WASHC4Q2M389 1173 aa9.41□□□□□ -0.9
SMARCA2-252ENST00000636559 CLASRPQ8N2M8 674 aaKnown RBP9.41□□□□□ -0.9
SMARCA2-252ENST00000636559 DHX16O60231 1041 aaKnown RBP9.41□□□□□ -0.9
SMARCA2-252ENST00000636559 CDC45O75419 566 aa9.41□□□□□ -0.9
SMARCA2-252ENST00000636559 SURF6O75683 361 aaKnown RBP9.41□□□□□ -0.9
SMARCA2-252ENST00000636559 CTDP1Q9Y5B0 961 aaPredicted RBP9.41□□□□□ -0.9
SMARCA2-252ENST00000636559 ABCC5O15440 1437 aa9.41□□□□□ -0.9
SMARCA2-252ENST00000636559 GOLGA6L19H0YKK7 550 aa9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 PES1O00541 588 aaKnown RBP9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 ZNF530Q6P9A1 599 aaPredicted RBP9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 PNISRQ8TF01 805 aaKnown RBP9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 WDR97A6NE52 1622 aa9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 CABP4P57796 275 aa9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 HDGFL1Q5TGJ6 251 aa9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 NOC3LQ8WTT2 800 aaKnown RBP9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 C22orf23Q9BZE7 217 aa9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 SPG7Q9UQ90 795 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms