RNA–Protein interactions for RNA: ENST00000636518.1

LRRK2-208, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5

Gene LRRK2, Length 2,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-208ENST00000636518 TRDNQ13061 729 aa7.19□□□□□ -1.26
LRRK2-208ENST00000636518 BIRC2Q13490 618 aa7.19□□□□□ -1.26
LRRK2-208ENST00000636518 POLA2Q14181 598 aa7.19□□□□□ -1.26
LRRK2-208ENST00000636518 RBM26Q5T8P6 1007 aaKnown RBP7.19□□□□□ -1.26
LRRK2-208ENST00000636518 SASS6Q6UVJ0 657 aa7.19□□□□□ -1.26
LRRK2-208ENST00000636518 NUCKS1Q9H1E3 243 aaKnown RBP7.19□□□□□ -1.26
LRRK2-208ENST00000636518 TPM3P06753 285 aa7.18□□□□□ -1.26
LRRK2-208ENST00000636518 ERCC3P19447 782 aa7.18□□□□□ -1.26
LRRK2-208ENST00000636518 C11orf91Q3C1V1 193 aa7.18□□□□□ -1.26
LRRK2-208ENST00000636518 ZNF280DQ6N043 979 aa7.18□□□□□ -1.26
LRRK2-208ENST00000636518 PIK3R5Q8WYR1 880 aa7.18□□□□□ -1.26
LRRK2-208ENST00000636518 KDM4CQ9H3R0 1056 aa7.18□□□□□ -1.26
LRRK2-208ENST00000636518 RPS6KL1Q9Y6S9 549 aa7.18□□□□□ -1.26
LRRK2-208ENST00000636518 PROCA1Q8NCQ7 364 aaPredicted RBP7.18□□□□□ -1.26
LRRK2-208ENST00000636518 PANK2Q9BZ23 570 aa7.18□□□□□ -1.26
LRRK2-208ENST00000636518 SUFUQ9UMX1 484 aa7.18□□□□□ -1.26
LRRK2-208ENST00000636518 PAXBP1Q9Y5B6 917 aa7.18□□□□□ -1.26
LRRK2-208ENST00000636518 HDGFL1Q5TGJ6 251 aa7.17□□□□□ -1.26
LRRK2-208ENST00000636518 APBB1IPQ7Z5R6 666 aaPredicted RBP7.17□□□□□ -1.26
LRRK2-208ENST00000636518 CREBRFQ8IUR6 639 aa7.17□□□□□ -1.26
LRRK2-208ENST00000636518 ATL2Q8NHH9 583 aa7.17□□□□□ -1.26
LRRK2-208ENST00000636518 FEZ1Q99689 392 aa7.17□□□□□ -1.26
LRRK2-208ENST00000636518 RSPH14Q9UHP6 348 aa7.17□□□□□ -1.26
LRRK2-208ENST00000636518 BECN1Q14457 450 aa7.16□□□□□ -1.26
LRRK2-208ENST00000636518 CXorf38Q8TB03 319 aa7.16□□□□□ -1.26
LRRK2-208ENST00000636518 UPF2Q9HAU5 1272 aaKnown RBP7.16□□□□□ -1.26
LRRK2-208ENST00000636518 PAX7P23759 505 aa7.16□□□□□ -1.26
LRRK2-208ENST00000636518 HS1BP3Q53T59 392 aa7.16□□□□□ -1.26
LRRK2-208ENST00000636518 CCDC91Q7Z6B0 441 aa7.16□□□□□ -1.26
LRRK2-208ENST00000636518 ERCC4Q92889 916 aaPredicted RBP7.16□□□□□ -1.26
LRRK2-208ENST00000636518 NOL10Q9BSC4 688 aaKnown RBP7.16□□□□□ -1.26
LRRK2-208ENST00000636518 CEP126Q9P2H0 1117 aa7.16□□□□□ -1.26
LRRK2-208ENST00000636518 UNC13AQ9UPW8 1703 aa7.15□□□□□ -1.26
LRRK2-208ENST00000636518 H0YHG0 523 aa7.15□□□□□ -1.26
LRRK2-208ENST00000636518 CD151P48509 253 aa7.15□□□□□ -1.26
LRRK2-208ENST00000636518 SARNPP82979 210 aaKnown RBP7.15□□□□□ -1.26
LRRK2-208ENST00000636518 ATP2B3Q16720 1220 aa7.15□□□□□ -1.26
LRRK2-208ENST00000636518 GET4Q7L5D6 327 aaPredicted RBP7.15□□□□□ -1.26
LRRK2-208ENST00000636518 CXorf56Q9H5V9 222 aa7.15□□□□□ -1.26
LRRK2-208ENST00000636518 GRPEL1Q9HAV7 217 aa7.15□□□□□ -1.26
LRRK2-208ENST00000636518 FRMD4BQ9Y2L6 1034 aa7.15□□□□□ -1.26
LRRK2-208ENST00000636518 CCDC196A0A1B0GTZ2 297 aa7.15□□□□□ -1.27
LRRK2-208ENST00000636518 CCT2P78371 535 aaKnown RBP7.15□□□□□ -1.27
LRRK2-208ENST00000636518 DNAJC21Q5F1R6 531 aaKnown RBP7.15□□□□□ -1.27
LRRK2-208ENST00000636518 CCDC181Q5TID7 509 aa7.15□□□□□ -1.27
LRRK2-208ENST00000636518 RASSF4Q9H2L5 321 aa7.15□□□□□ -1.27
LRRK2-208ENST00000636518 TPD52L2O43399 206 aaKnown RBP7.14□□□□□ -1.27
LRRK2-208ENST00000636518 ZRANB2O95218 330 aaKnown RBP eCLIP7.14□□□□□ -1.27
LRRK2-208ENST00000636518 FOXD4Q12950 439 aaPredicted RBP7.14□□□□□ -1.27
LRRK2-208ENST00000636518 SF3A1Q15459 793 aaKnown RBP7.14□□□□□ -1.27
LRRK2-208ENST00000636518 GORABQ5T7V8 394 aa7.14□□□□□ -1.27
LRRK2-208ENST00000636518 KRBA2Q6ZNG9 492 aa7.14□□□□□ -1.27
LRRK2-208ENST00000636518 DDX49Q9Y6V7 483 aaKnown RBP7.14□□□□□ -1.27
LRRK2-208ENST00000636518 CCDC173Q0VFZ6 552 aa7.13□□□□□ -1.27
LRRK2-208ENST00000636518 HELBQ8NG08 1087 aaPredicted RBP7.13□□□□□ -1.27
LRRK2-208ENST00000636518 ZCRB1Q8TBF4 217 aaKnown RBP7.13□□□□□ -1.27
LRRK2-208ENST00000636518 TESPA1A2RU30 521 aaPredicted RBP7.13□□□□□ -1.27
LRRK2-208ENST00000636518 RPAINQ86UA6 219 aa7.13□□□□□ -1.27
LRRK2-208ENST00000636518 OGFRQ9NZT2 677 aa7.13□□□□□ -1.27
LRRK2-208ENST00000636518 ANKRD33BA6NCL7 494 aa7.12□□□□□ -1.27
LRRK2-208ENST00000636518 ABCD1P33897 745 aa7.12□□□□□ -1.27
LRRK2-208ENST00000636518 KLHL23Q8NBE8 558 aa7.12□□□□□ -1.27
LRRK2-208ENST00000636518 TBC1D22AQ8WUA7 517 aa7.12□□□□□ -1.27
LRRK2-208ENST00000636518 RANBP17Q9H2T7 1088 aaKnown RBP7.12□□□□□ -1.27
LRRK2-208ENST00000636518 SLFN14P0C7P3 912 aa7.12□□□□□ -1.27
LRRK2-208ENST00000636518 TNNT1P13805 278 aa7.12□□□□□ -1.27
LRRK2-208ENST00000636518 RHBDL3P58872 404 aa7.12□□□□□ -1.27
LRRK2-208ENST00000636518 ACRBPQ8NEB7 543 aa7.12□□□□□ -1.27
LRRK2-208ENST00000636518 TEX13AQ9BXU3 409 aaPredicted RBP7.12□□□□□ -1.27
LRRK2-208ENST00000636518 GOLGA6L6A8MZA4 724 aa7.11□□□□□ -1.27
LRRK2-208ENST00000636518 SETSIPP0DME0 302 aa7.11□□□□□ -1.27
LRRK2-208ENST00000636518 MCM5P33992 734 aa7.11□□□□□ -1.27
LRRK2-208ENST00000636518 GSCP56915 257 aaPredicted RBP7.11□□□□□ -1.27
LRRK2-208ENST00000636518 CDC37Q16543 378 aaPredicted RBP7.11□□□□□ -1.27
LRRK2-208ENST00000636518 ZKSCAN2Q63HK3 967 aa7.11□□□□□ -1.27
LRRK2-208ENST00000636518 FAM184AQ8NB25 1140 aa7.11□□□□□ -1.27
LRRK2-208ENST00000636518 MYRIPQ8NFW9 859 aa7.11□□□□□ -1.27
LRRK2-208ENST00000636518 TNPO1Q92973 898 aaKnown RBP7.11□□□□□ -1.27
LRRK2-208ENST00000636518 PPP1R9BQ96SB3 815 aa7.11□□□□□ -1.27
LRRK2-208ENST00000636518 GOLGA6L22H0YM25 854 aa7.11□□□□□ -1.27
LRRK2-208ENST00000636518 HSPA5P11021 654 aaKnown RBP7.11□□□□□ -1.27
LRRK2-208ENST00000636518 HMGN5P82970 282 aaKnown RBP7.11□□□□□ -1.27
LRRK2-208ENST00000636518 TMCO4Q5TGY1 634 aa7.11□□□□□ -1.27
LRRK2-208ENST00000636518 GOLGA6L1Q8N7Z2 621 aa7.11□□□□□ -1.27
LRRK2-208ENST00000636518 SNRNP27Q8WVK2 155 aaKnown RBP7.11□□□□□ -1.27
LRRK2-208ENST00000636518 RAD54L2Q9Y4B4 1467 aa7.11□□□□□ -1.27
LRRK2-208ENST00000636518 CCP110O43303 1012 aa7.1□□□□□ -1.27
LRRK2-208ENST00000636518 EPB41L2O43491 1005 aaKnown RBP7.1□□□□□ -1.27
LRRK2-208ENST00000636518 ABCB7O75027 752 aa7.1□□□□□ -1.27
LRRK2-208ENST00000636518 GTF2F1P35269 517 aaKnown RBP eCLIP7.1□□□□□ -1.27
LRRK2-208ENST00000636518 SYNPO2Q9UMS6 1093 aa7.1□□□□□ -1.27
LRRK2-208ENST00000636518 ATP6V1AP38606 617 aa7.1□□□□□ -1.27
LRRK2-208ENST00000636518 RBM5P52756 815 aaKnown RBP eCLIP7.1□□□□□ -1.27
LRRK2-208ENST00000636518 ZSCAN26Q16670 478 aa7.1□□□□□ -1.27
LRRK2-208ENST00000636518 JAKMIP3Q5VZ66 844 aa7.1□□□□□ -1.27
LRRK2-208ENST00000636518 PNISRQ8TF01 805 aaKnown RBP7.1□□□□□ -1.27
LRRK2-208ENST00000636518 PRIMPOLQ96LW4 560 aa7.1□□□□□ -1.27
LRRK2-208ENST00000636518 DEF6Q9H4E7 631 aa7.1□□□□□ -1.27
LRRK2-208ENST00000636518 RBM27Q9P2N5 1060 aaKnown RBP7.1□□□□□ -1.27
LRRK2-208ENST00000636518 ANKRD18BA2A2Z9 1011 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms