RNA–Protein interactions for RNA: ENST00000636420.1

PCCA-212, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-212ENST00000636420 BCANQ96GW7 911 aa11.11□□□□□ -0.63
PCCA-212ENST00000636420 RBM19Q9Y4C8 960 aaKnown RBP11.11□□□□□ -0.63
PCCA-212ENST00000636420 ATRNO75882 1429 aa11.11□□□□□ -0.63
PCCA-212ENST00000636420 SAMD1Q6SPF0 538 aaPredicted RBP11.1□□□□□ -0.63
PCCA-212ENST00000636420 LRRC59Q96AG4 307 aaKnown RBP11.1□□□□□ -0.63
PCCA-212ENST00000636420 SLC52A1Q9NWF4 448 aa11.1□□□□□ -0.63
PCCA-212ENST00000636420 MYO5BQ9ULV0 1848 aa11.1□□□□□ -0.63
PCCA-212ENST00000636420 PIK3R4Q99570 1358 aa11.1□□□□□ -0.63
PCCA-212ENST00000636420 TMEM131LA2VDJ0 1609 aa11.1□□□□□ -0.63
PCCA-212ENST00000636420 CCDC125Q86Z20 511 aa11.09□□□□□ -0.63
PCCA-212ENST00000636420 ABCC5O15440 1437 aa11.09□□□□□ -0.63
PCCA-212ENST00000636420 MYOM3Q5VTT5 1437 aa11.09□□□□□ -0.63
PCCA-212ENST00000636420 ADAMTS2O95450 1211 aa11.09□□□□□ -0.63
PCCA-212ENST00000636420 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
PCCA-212ENST00000636420 FNBP4Q8N3X1 1017 aaPredicted RBP11.09□□□□□ -0.63
PCCA-212ENST00000636420 TRPM2O94759 1503 aa11.08□□□□□ -0.64
PCCA-212ENST00000636420 RRP7BPQ9NSQ0 103 aa11.08□□□□□ -0.64
PCCA-212ENST00000636420 USP21Q9UK80 565 aa11.08□□□□□ -0.64
PCCA-212ENST00000636420 TRPC5Q9UL62 973 aaPredicted RBP11.08□□□□□ -0.64
PCCA-212ENST00000636420 KANK1Q14678 1352 aa11.08□□□□□ -0.64
PCCA-212ENST00000636420 CROCC2H7BZ55 1655 aa11.07□□□□□ -0.64
PCCA-212ENST00000636420 GCC2Q8IWJ2 1684 aa11.07□□□□□ -0.64
PCCA-212ENST00000636420 LAMC1P11047 1609 aa11.07□□□□□ -0.64
PCCA-212ENST00000636420 XRN1Q8IZH2 1706 aaKnown RBP11.07□□□□□ -0.64
PCCA-212ENST00000636420 PPP1R15AO75807 674 aaPredicted RBP11.06□□□□□ -0.64
PCCA-212ENST00000636420 ERICH6Q7L0X2 663 aa11.06□□□□□ -0.64
PCCA-212ENST00000636420 AMOTL2Q9Y2J4 779 aa11.06□□□□□ -0.64
PCCA-212ENST00000636420 BCL9LQ86UU0 1499 aa11.05□□□□□ -0.64
PCCA-212ENST00000636420 BLMP54132 1417 aaPredicted RBP11.05□□□□□ -0.64
PCCA-212ENST00000636420 PTCH1Q13635 1447 aa11.05□□□□□ -0.64
PCCA-212ENST00000636420 RPRD2Q5VT52 1461 aaKnown RBP11.04□□□□□ -0.64
PCCA-212ENST00000636420 DEFB132Q7Z7B7 95 aa11.04□□□□□ -0.64
PCCA-212ENST00000636420 UNC13BO14795 1591 aa11.04□□□□□ -0.64
PCCA-212ENST00000636420 NRXN3Q9Y4C0 1643 aa11.03□□□□□ -0.64
PCCA-212ENST00000636420 ADGRL3Q9HAR2 1447 aa11.02□□□□□ -0.64
PCCA-212ENST00000636420 FKBP8Q14318 412 aa11.02□□□□□ -0.64
PCCA-212ENST00000636420 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.64
PCCA-212ENST00000636420 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.02□□□□□ -0.64
PCCA-212ENST00000636420 COL22A1Q8NFW1 1626 aaPredicted RBP11.02□□□□□ -0.65
PCCA-212ENST00000636420 MYOM2P54296 1465 aa11.02□□□□□ -0.65
PCCA-212ENST00000636420 SOS2Q07890 1332 aaPredicted RBP11.02□□□□□ -0.65
PCCA-212ENST00000636420 HDGFP51858 240 aaKnown RBP11.01□□□□□ -0.65
PCCA-212ENST00000636420 GLI3P10071 1580 aa11.01□□□□□ -0.65
PCCA-212ENST00000636420 DAPK1P53355 1430 aa11.01□□□□□ -0.65
PCCA-212ENST00000636420 C1orf167Q5SNV9 1468 aa11.01□□□□□ -0.65
PCCA-212ENST00000636420 KANK4Q5T7N3 995 aaPredicted RBP11.01□□□□□ -0.65
PCCA-212ENST00000636420 RTN4Q9NQC3 1192 aaKnown RBP11.01□□□□□ -0.65
PCCA-212ENST00000636420 NALCNQ8IZF0 1738 aa11□□□□□ -0.65
PCCA-212ENST00000636420 GJD4Q96KN9 370 aaPredicted RBP10.99□□□□□ -0.65
PCCA-212ENST00000636420 METP08581 1390 aa10.98□□□□□ -0.65
PCCA-212ENST00000636420 PSDA5PKW4 1024 aaPredicted RBP10.98□□□□□ -0.65
PCCA-212ENST00000636420 RALGAPBQ86X10 1494 aa10.97□□□□□ -0.65
PCCA-212ENST00000636420 SPHKAPQ2M3C7 1700 aa10.97□□□□□ -0.65
PCCA-212ENST00000636420 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.96□□□□□ -0.65
PCCA-212ENST00000636420 BRWD3Q6RI45 1802 aa10.96□□□□□ -0.65
PCCA-212ENST00000636420 POLA2Q14181 598 aa10.96□□□□□ -0.65
PCCA-212ENST00000636420 ORAI2Q96SN7 254 aa10.96□□□□□ -0.65
PCCA-212ENST00000636420 ANKRD30AQ9BXX3 1397 aa10.96□□□□□ -0.65
PCCA-212ENST00000636420 RAB3GAP2Q9H2M9 1393 aa10.96□□□□□ -0.65
PCCA-212ENST00000636420 PTPN23Q9H3S7 1636 aa10.96□□□□□ -0.66
PCCA-212ENST00000636420 MARF1Q9Y4F3 1742 aaKnown RBP10.95□□□□□ -0.66
PCCA-212ENST00000636420 SLIT2O94813 1529 aa10.94□□□□□ -0.66
PCCA-212ENST00000636420 ADGRL2O95490 1459 aa10.94□□□□□ -0.66
PCCA-212ENST00000636420 CHIC2Q9UKJ5 165 aa10.94□□□□□ -0.66
PCCA-212ENST00000636420 PXDNQ92626 1479 aa10.94□□□□□ -0.66
PCCA-212ENST00000636420 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
PCCA-212ENST00000636420 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
PCCA-212ENST00000636420 E9PCH4 1651 aa10.93□□□□□ -0.66
PCCA-212ENST00000636420 ANP32CO43423 234 aa10.92□□□□□ -0.66
PCCA-212ENST00000636420 SLC24A1O60721 1099 aa10.92□□□□□ -0.66
PCCA-212ENST00000636420 PRKCSHP14314 528 aaPredicted RBP10.92□□□□□ -0.66
PCCA-212ENST00000636420 YY1P25490 414 aa10.91□□□□□ -0.66
PCCA-212ENST00000636420 UNC5CLQ8IV45 518 aa10.91□□□□□ -0.66
PCCA-212ENST00000636420 ANKRD50Q9ULJ7 1429 aa10.9□□□□□ -0.66
PCCA-212ENST00000636420 IQGAP3Q86VI3 1631 aa10.9□□□□□ -0.66
PCCA-212ENST00000636420 ONECUT3O60422 494 aaPredicted RBP10.9□□□□□ -0.66
PCCA-212ENST00000636420 SEPT12Q8IYM1 358 aa10.9□□□□□ -0.66
PCCA-212ENST00000636420 ROBO2Q9HCK4 1378 aa10.89□□□□□ -0.67
PCCA-212ENST00000636420 SF3B2Q13435 895 aaKnown RBP10.88□□□□□ -0.67
PCCA-212ENST00000636420 PRAG1Q86YV5 1406 aa10.88□□□□□ -0.67
PCCA-212ENST00000636420 R3HDM1Q15032 1099 aaKnown RBP10.87□□□□□ -0.67
PCCA-212ENST00000636420 PPP4R2Q9NY27 417 aa10.87□□□□□ -0.67
PCCA-212ENST00000636420 KRT27Q7Z3Y8 459 aa10.86□□□□□ -0.67
PCCA-212ENST00000636420 USP32Q8NFA0 1604 aa10.85□□□□□ -0.67
PCCA-212ENST00000636420 BAG6P46379 1132 aa10.85□□□□□ -0.67
PCCA-212ENST00000636420 XPCQ01831 940 aaPredicted RBP10.85□□□□□ -0.67
PCCA-212ENST00000636420 VPS72Q15906 364 aa10.85□□□□□ -0.67
PCCA-212ENST00000636420 NPHP3Q7Z494 1330 aa10.85□□□□□ -0.67
PCCA-212ENST00000636420 DISP2A7MBM2 1401 aa10.85□□□□□ -0.67
PCCA-212ENST00000636420 NEXMIFQ5QGS0 1516 aa10.85□□□□□ -0.67
PCCA-212ENST00000636420 EN1Q05925 392 aaPredicted RBP10.84□□□□□ -0.67
PCCA-212ENST00000636420 IFFO2Q5TF58 517 aa10.84□□□□□ -0.67
PCCA-212ENST00000636420 RBM42Q9BTD8 480 aaKnown RBP10.84□□□□□ -0.67
PCCA-212ENST00000636420 DDX10Q13206 875 aaKnown RBP10.84□□□□□ -0.67
PCCA-212ENST00000636420 CDC42BPGQ6DT37 1551 aa10.83□□□□□ -0.68
PCCA-212ENST00000636420 FOXO3O43524 673 aa10.83□□□□□ -0.68
PCCA-212ENST00000636420 TNS1Q9HBL0 1735 aaKnown RBP10.82□□□□□ -0.68
PCCA-212ENST00000636420 DEKP35659 375 aaKnown RBP10.82□□□□□ -0.68
PCCA-212ENST00000636420 PLCH1Q4KWH8 1693 aa10.82□□□□□ -0.68
PCCA-212ENST00000636420 SPATA31A3Q5VYP0 1347 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms