RNA–Protein interactions for RNA: ENST00000636221.1

SMARCA2-248, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-248ENST00000636221 TOM1O60784 492 aa5.74□□□□□ -1.49
SMARCA2-248ENST00000636221 ATF3P18847 181 aa5.74□□□□□ -1.49
SMARCA2-248ENST00000636221 HIRIP3Q9BW71 556 aaPredicted RBP5.74□□□□□ -1.49
SMARCA2-248ENST00000636221 C19orf44Q9H6X5 657 aa5.74□□□□□ -1.49
SMARCA2-248ENST00000636221 PLEKHH1Q9ULM0 1364 aa5.74□□□□□ -1.49
SMARCA2-248ENST00000636221 IQSEC2Q5JU85 1478 aa5.74□□□□□ -1.49
SMARCA2-248ENST00000636221 ROBO1Q9Y6N7 1651 aa5.74□□□□□ -1.49
SMARCA2-248ENST00000636221 PHLPP1O60346 1717 aa5.74□□□□□ -1.49
SMARCA2-248ENST00000636221 TECPR2O15040 1411 aa5.74□□□□□ -1.49
SMARCA2-248ENST00000636221 NUTM2FA1L443 756 aa5.73□□□□□ -1.49
SMARCA2-248ENST00000636221 FAM135BQ49AJ0 1406 aa5.73□□□□□ -1.49
SMARCA2-248ENST00000636221 ADGRL3Q9HAR2 1447 aa5.73□□□□□ -1.49
SMARCA2-248ENST00000636221 CENPJQ9HC77 1338 aaPredicted RBP5.73□□□□□ -1.49
SMARCA2-248ENST00000636221 CDC42BPGQ6DT37 1551 aa5.72□□□□□ -1.49
SMARCA2-248ENST00000636221 EIF3AQ14152 1382 aaKnown RBP5.72□□□□□ -1.49
SMARCA2-248ENST00000636221 CADPS2Q86UW7 1296 aa5.72□□□□□ -1.49
SMARCA2-248ENST00000636221 SIRT1Q96EB6 747 aa5.72□□□□□ -1.49
SMARCA2-248ENST00000636221 NCOA3Q9Y6Q9 1424 aa5.72□□□□□ -1.49
SMARCA2-248ENST00000636221 USP32Q8NFA0 1604 aa5.71□□□□□ -1.5
SMARCA2-248ENST00000636221 SLAIN2Q9P270 581 aa5.71□□□□□ -1.5
SMARCA2-248ENST00000636221 ADGRB2O60241 1585 aa5.71□□□□□ -1.5
SMARCA2-248ENST00000636221 GPRASP1Q5JY77 1395 aa5.7□□□□□ -1.5
SMARCA2-248ENST00000636221 USP47Q96K76 1375 aa5.7□□□□□ -1.5
SMARCA2-248ENST00000636221 KIF1AQ12756 1690 aa5.7□□□□□ -1.5
SMARCA2-248ENST00000636221 TOPAZ1Q8N9V7 1692 aa5.7□□□□□ -1.5
SMARCA2-248ENST00000636221 ST20-MTHFSA0A0A6YYL1 179 aa5.7□□□□□ -1.5
SMARCA2-248ENST00000636221 SRPK2P78362 688 aaKnown RBP5.7□□□□□ -1.5
SMARCA2-248ENST00000636221 ESCO1Q5FWF5 840 aa5.7□□□□□ -1.5
SMARCA2-248ENST00000636221 FBXO41Q8TF61 875 aa5.7□□□□□ -1.5
SMARCA2-248ENST00000636221 CDK19Q9BWU1 502 aa5.7□□□□□ -1.5
SMARCA2-248ENST00000636221 DCCP43146 1447 aa5.7□□□□□ -1.5
SMARCA2-248ENST00000636221 EVC2Q86UK5 1308 aa5.7□□□□□ -1.5
SMARCA2-248ENST00000636221 AKAP12Q02952 1782 aa5.7□□□□□ -1.5
SMARCA2-248ENST00000636221 MST1RQ04912 1400 aa5.69□□□□□ -1.5
SMARCA2-248ENST00000636221 WASLO00401 505 aaPredicted RBP5.69□□□□□ -1.5
SMARCA2-248ENST00000636221 ZEB1P37275 1124 aaPredicted RBP5.69□□□□□ -1.5
SMARCA2-248ENST00000636221 EIF4G2P78344 907 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMARCA2-248ENST00000636221 ORAI2Q96SN7 254 aa5.69□□□□□ -1.5
SMARCA2-248ENST00000636221 NHSL1Q5SYE7 1610 aa5.69□□□□□ -1.5
SMARCA2-248ENST00000636221 C1orf167Q5SNV9 1468 aa5.69□□□□□ -1.5
SMARCA2-248ENST00000636221 TULP4Q9NRJ4 1543 aa5.69□□□□□ -1.5
SMARCA2-248ENST00000636221 HSPA5P11021 654 aaKnown RBP5.68□□□□□ -1.5
SMARCA2-248ENST00000636221 BRINP3Q76B58 766 aa5.68□□□□□ -1.5
SMARCA2-248ENST00000636221 PMFBP1Q8TBY8 1022 aa5.68□□□□□ -1.5
SMARCA2-248ENST00000636221 DDX17Q92841 729 aaKnown RBP5.68□□□□□ -1.5
SMARCA2-248ENST00000636221 NUDT16Q96DE0 195 aaKnown RBP5.68□□□□□ -1.5
SMARCA2-248ENST00000636221 POLR3GLQ9BT43 218 aa5.68□□□□□ -1.5
SMARCA2-248ENST00000636221 CABP2Q9NPB3 220 aa5.68□□□□□ -1.5
SMARCA2-248ENST00000636221 FOXO3O43524 673 aa5.67□□□□□ -1.5
SMARCA2-248ENST00000636221 TMF1P82094 1093 aa5.67□□□□□ -1.5
SMARCA2-248ENST00000636221 XPCQ01831 940 aaPredicted RBP5.67□□□□□ -1.5
SMARCA2-248ENST00000636221 PSME1Q06323 249 aa5.67□□□□□ -1.5
SMARCA2-248ENST00000636221 ILDR1Q86SU0 546 aaPredicted RBP5.67□□□□□ -1.5
SMARCA2-248ENST00000636221 TMC1Q8TDI8 760 aa5.67□□□□□ -1.5
SMARCA2-248ENST00000636221 ANKARQ7Z5J8 1434 aa5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 MYOM1P52179 1685 aa5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 ATP7BP35670 1465 aa5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 MON2Q7Z3U7 1717 aa5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 MARF1Q9Y4F3 1742 aaKnown RBP5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 PLEKHG5O94827 1062 aa5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 HSPA1LP34931 641 aa5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 NGDNQ8NEJ9 315 aaKnown RBP5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 PHF8Q9UPP1 1060 aa5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 KIF20BQ96Q89 1820 aa5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 PRR36Q9H6K5 1346 aa5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 COL16A1Q07092 1604 aaPredicted RBP5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 AHDC1Q5TGY3 1603 aaPredicted RBP5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 DISP3Q9P2K9 1392 aa5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 SBNO2Q9Y2G9 1366 aa5.66□□□□□ -1.5
SMARCA2-248ENST00000636221 PPIP5K1Q6PFW1 1433 aa5.65□□□□□ -1.5
SMARCA2-248ENST00000636221 TRPM3Q9HCF6 1732 aaPredicted RBP5.65□□□□□ -1.5
SMARCA2-248ENST00000636221 SLC24A1O60721 1099 aa5.65□□□□□ -1.5
SMARCA2-248ENST00000636221 PAK3O75914 559 aaPredicted RBP5.65□□□□□ -1.5
SMARCA2-248ENST00000636221 LMOD2Q6P5Q4 547 aa5.65□□□□□ -1.5
SMARCA2-248ENST00000636221 TESK2Q96S53 571 aa5.65□□□□□ -1.5
SMARCA2-248ENST00000636221 CABP1Q9NZU7 370 aa5.65□□□□□ -1.5
SMARCA2-248ENST00000636221 CCDC61Q9Y6R9 512 aa5.65□□□□□ -1.5
SMARCA2-248ENST00000636221 SHPRHQ149N8 1683 aa5.65□□□□□ -1.51
SMARCA2-248ENST00000636221 RGPD5Q99666 1765 aa5.65□□□□□ -1.51
SMARCA2-248ENST00000636221 MAP2P11137 1827 aaKnown RBP5.64□□□□□ -1.51
SMARCA2-248ENST00000636221 ALS2Q96Q42 1657 aa5.64□□□□□ -1.51
SMARCA2-248ENST00000636221 CDCA8Q53HL2 280 aa5.64□□□□□ -1.51
SMARCA2-248ENST00000636221 KRT28Q7Z3Y7 464 aa5.64□□□□□ -1.51
SMARCA2-248ENST00000636221 ACEP12821 1306 aa5.64□□□□□ -1.51
SMARCA2-248ENST00000636221 NPHP3Q7Z494 1330 aa5.64□□□□□ -1.51
SMARCA2-248ENST00000636221 ATAD2Q6PL18 1390 aa5.64□□□□□ -1.51
SMARCA2-248ENST00000636221 KAT6BQ8WYB5 2073 aa5.63□□□□□ -1.51
SMARCA2-248ENST00000636221 ABCA3Q99758 1704 aa5.63□□□□□ -1.51
SMARCA2-248ENST00000636221 LTN1O94822 1766 aa5.63□□□□□ -1.51
SMARCA2-248ENST00000636221 LRRC59Q96AG4 307 aaKnown RBP5.63□□□□□ -1.51
SMARCA2-248ENST00000636221 SLC12A5Q9H2X9 1139 aa5.63□□□□□ -1.51
SMARCA2-248ENST00000636221 PXDNQ92626 1479 aa5.63□□□□□ -1.51
SMARCA2-248ENST00000636221 PLEKHG3A1L390 1219 aa5.62□□□□□ -1.51
SMARCA2-248ENST00000636221 NUTM2BA6NNL0 878 aaPredicted RBP5.62□□□□□ -1.51
SMARCA2-248ENST00000636221 NUTM2EB1AL46 878 aaPredicted RBP5.62□□□□□ -1.51
SMARCA2-248ENST00000636221 C11orf95C9JLR9 678 aaPredicted RBP5.62□□□□□ -1.51
SMARCA2-248ENST00000636221 HDGFL2Q7Z4V5 671 aaPredicted RBP5.62□□□□□ -1.51
SMARCA2-248ENST00000636221 NUTM2AQ8IVF1 878 aaPredicted RBP5.62□□□□□ -1.51
SMARCA2-248ENST00000636221 KTN1Q86UP2 1357 aaKnown RBP5.62□□□□□ -1.51
SMARCA2-248ENST00000636221 NRKQ7Z2Y5 1582 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms