RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 HSPA5P11021 654 aaKnown RBP7.41□□□□□ -1.22
CHD2-221ENST00000635856 CT47A1Q5JQC4 288 aaPredicted RBP7.41□□□□□ -1.22
CHD2-221ENST00000635856 TBC1D2Q9BYX2 928 aa7.41□□□□□ -1.22
CHD2-221ENST00000635856 SOGA1O94964 1423 aa7.41□□□□□ -1.22
CHD2-221ENST00000635856 BIRC2Q13490 618 aa7.41□□□□□ -1.22
CHD2-221ENST00000635856 CIZ1Q9ULV3 898 aaPredicted RBP7.41□□□□□ -1.22
CHD2-221ENST00000635856 MAP2K2P36507 400 aa7.41□□□□□ -1.22
CHD2-221ENST00000635856 USP8P40818 1118 aa7.41□□□□□ -1.22
CHD2-221ENST00000635856 RNF217Q8TC41 542 aa7.41□□□□□ -1.22
CHD2-221ENST00000635856 TSC1Q92574 1164 aa7.41□□□□□ -1.22
CHD2-221ENST00000635856 CALR3Q96L12 384 aaKnown RBP7.41□□□□□ -1.22
CHD2-221ENST00000635856 SUFUQ9UMX1 484 aa7.41□□□□□ -1.22
CHD2-221ENST00000635856 JRKLQ9Y4A0 524 aa7.41□□□□□ -1.22
CHD2-221ENST00000635856 CNTLNQ9NXG0 1405 aa7.4□□□□□ -1.22
CHD2-221ENST00000635856 CAPN2P17655 700 aa7.4□□□□□ -1.22
CHD2-221ENST00000635856 TPM4P67936 248 aa7.4□□□□□ -1.22
CHD2-221ENST00000635856 NOLC1Q14978 699 aaKnown RBP eCLIP7.4□□□□□ -1.22
CHD2-221ENST00000635856 SKAP1Q86WV1 359 aa7.4□□□□□ -1.22
CHD2-221ENST00000635856 ZNF513Q8N8E2 541 aaPredicted RBP7.4□□□□□ -1.22
CHD2-221ENST00000635856 GOLGA3Q08378 1498 aa7.4□□□□□ -1.23
CHD2-221ENST00000635856 PEG3Q9GZU2 1588 aa7.4□□□□□ -1.23
CHD2-221ENST00000635856 RAB3GAP2Q9H2M9 1393 aa7.4□□□□□ -1.23
CHD2-221ENST00000635856 GAS2L3Q86XJ1 694 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 CXorf56Q9H5V9 222 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 RAD51AP2Q09MP3 1159 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 MLECQ14165 292 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 PPP2R5AQ15172 486 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 ZKSCAN8Q15776 578 aaPredicted RBP7.39□□□□□ -1.23
CHD2-221ENST00000635856 GIMAP7Q8NHV1 300 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 ANTXR1Q9H6X2 564 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 VPS8Q8N3P4 1428 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 CUX2O14529 1486 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 CFTRP13569 1480 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 KIF16BQ96L93 1317 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 KIF3CO14782 793 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 SLFN14P0C7P3 912 aa7.39□□□□□ -1.23
CHD2-221ENST00000635856 SUDS3Q9H7L9 328 aaPredicted RBP7.39□□□□□ -1.23
CHD2-221ENST00000635856 FAM177BA6PVY3 158 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 PPP1R12AO14974 1030 aaPredicted RBP7.38□□□□□ -1.23
CHD2-221ENST00000635856 PLIN1O60240 522 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 TPM3P06753 285 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 FAM50AQ14320 339 aaKnown RBP7.38□□□□□ -1.23
CHD2-221ENST00000635856 SYAP1Q96A49 352 aaPredicted RBP7.38□□□□□ -1.23
CHD2-221ENST00000635856 AK7Q96M32 723 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 KCNA4P22459 653 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 RABEP1Q15276 862 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 ZRSR1Q15695 479 aaKnown RBP7.38□□□□□ -1.23
CHD2-221ENST00000635856 HNRNPH2P55795 449 aaKnown RBP7.38□□□□□ -1.23
CHD2-221ENST00000635856 TRDNQ13061 729 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 CAVIN1Q6NZI2 390 aaKnown RBP7.38□□□□□ -1.23
CHD2-221ENST00000635856 OTUD6BQ8N6M0 293 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 MED4Q9NPJ6 270 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 STK26Q9P289 416 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 PLCB2Q00722 1185 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 ZNF710Q8N1W2 664 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 NBPF3Q9H094 633 aa7.38□□□□□ -1.23
CHD2-221ENST00000635856 NUCKS1Q9H1E3 243 aaKnown RBP7.38□□□□□ -1.23
CHD2-221ENST00000635856 BSDC1Q9NW68 430 aaPredicted RBP7.38□□□□□ -1.23
CHD2-221ENST00000635856 PLEKHD1A6NEE1 506 aa7.37□□□□□ -1.23
CHD2-221ENST00000635856 KLHL40Q2TBA0 621 aa7.37□□□□□ -1.23
CHD2-221ENST00000635856 NBPF10Q6P3W6 841 aaKnown RBP7.37□□□□□ -1.23
CHD2-221ENST00000635856 CCNB3Q8WWL7 1395 aa7.37□□□□□ -1.23
CHD2-221ENST00000635856 LEKR1Q6ZMV7 388 aa7.37□□□□□ -1.23
CHD2-221ENST00000635856 CCDC191Q8NCU4 936 aa7.37□□□□□ -1.23
CHD2-221ENST00000635856 PRDM16Q9HAZ2 1276 aa7.37□□□□□ -1.23
CHD2-221ENST00000635856 SETD5Q9C0A6 1442 aa7.37□□□□□ -1.23
CHD2-221ENST00000635856 IPO7O95373 1038 aaKnown RBP7.36□□□□□ -1.23
CHD2-221ENST00000635856 TNPO1Q92973 898 aaKnown RBP7.36□□□□□ -1.23
CHD2-221ENST00000635856 LAMC3Q9Y6N6 1575 aa7.36□□□□□ -1.23
CHD2-221ENST00000635856 CCDC196A0A1B0GTZ2 297 aa7.36□□□□□ -1.23
CHD2-221ENST00000635856 SETSIPP0DME0 302 aa7.36□□□□□ -1.23
CHD2-221ENST00000635856 CCDC112Q8NEF3 446 aa7.36□□□□□ -1.23
CHD2-221ENST00000635856 PIBF1Q8WXW3 757 aa7.36□□□□□ -1.23
CHD2-221ENST00000635856 CWC22Q9HCG8 908 aaKnown RBP7.36□□□□□ -1.23
CHD2-221ENST00000635856 IRF6O14896 467 aa7.36□□□□□ -1.23
CHD2-221ENST00000635856 NRDCO43847 1150 aa7.36□□□□□ -1.23
CHD2-221ENST00000635856 TPM1P09493 284 aa7.36□□□□□ -1.23
CHD2-221ENST00000635856 BMS1Q14692 1282 aaKnown RBP7.36□□□□□ -1.23
CHD2-221ENST00000635856 SIRT1Q96EB6 747 aa7.36□□□□□ -1.23
CHD2-221ENST00000635856 REC8O95072 547 aa7.35□□□□□ -1.23
CHD2-221ENST00000635856 NOP2P46087 812 aaKnown RBP7.35□□□□□ -1.23
CHD2-221ENST00000635856 NUCB2P80303 420 aa7.35□□□□□ -1.23
CHD2-221ENST00000635856 RGL3Q3MIN7 710 aa7.35□□□□□ -1.23
CHD2-221ENST00000635856 DNAAF4Q8WXU2 420 aa7.35□□□□□ -1.23
CHD2-221ENST00000635856 CPSF2Q9P2I0 782 aaKnown RBP7.35□□□□□ -1.23
CHD2-221ENST00000635856 DDX41Q9UJV9 622 aaKnown RBP7.35□□□□□ -1.23
CHD2-221ENST00000635856 CCP110O43303 1012 aa7.35□□□□□ -1.23
CHD2-221ENST00000635856 KRBA2Q6ZNG9 492 aa7.35□□□□□ -1.23
CHD2-221ENST00000635856 PIK3R5Q8WYR1 880 aa7.35□□□□□ -1.23
CHD2-221ENST00000635856 FAM210AQ96ND0 272 aa7.35□□□□□ -1.23
CHD2-221ENST00000635856 C22orf23Q9BZE7 217 aa7.35□□□□□ -1.23
CHD2-221ENST00000635856 MAFGO15525 162 aa7.35□□□□□ -1.23
CHD2-221ENST00000635856 RDXP35241 583 aaKnown RBP7.35□□□□□ -1.23
CHD2-221ENST00000635856 ARMCX6Q7L4S7 300 aa7.35□□□□□ -1.23
CHD2-221ENST00000635856 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHD2-221ENST00000635856 CARMIL1Q5VZK9 1371 aa7.34□□□□□ -1.23
CHD2-221ENST00000635856 MYO1CO00159 1063 aa7.34□□□□□ -1.23
CHD2-221ENST00000635856 ZNF397Q8NF99 534 aaPredicted RBP7.34□□□□□ -1.23
CHD2-221ENST00000635856 ARGLU1Q9NWB6 273 aaPredicted RBP7.34□□□□□ -1.23
CHD2-221ENST00000635856 MORC2Q9Y6X9 1032 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms