RNA–Protein interactions for RNA: ENST00000635530.1

SMARCA2-242, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-242ENST00000635530 NUTM2DQ5VT03 806 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-242ENST00000635530 NUTM2AQ8IVF1 878 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-242ENST00000635530 MTMR14Q8NCE2 650 aa13.08□□□□□ -0.32
SMARCA2-242ENST00000635530 CLUAP1Q96AJ1 413 aa13.08□□□□□ -0.32
SMARCA2-242ENST00000635530 PRR14Q9BWN1 585 aa13.08□□□□□ -0.32
SMARCA2-242ENST00000635530 THSD4Q6ZMP0 1018 aa13.07□□□□□ -0.32
SMARCA2-242ENST00000635530 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
SMARCA2-242ENST00000635530 SLC27A5Q9Y2P5 690 aa13.07□□□□□ -0.32
SMARCA2-242ENST00000635530 SOCS7O14512 581 aa13.06□□□□□ -0.32
SMARCA2-242ENST00000635530 UBTFP17480 764 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-242ENST00000635530 A6NJR5 290 aa13.05□□□□□ -0.32
SMARCA2-242ENST00000635530 CFAP99D6REC4 459 aa13.05□□□□□ -0.32
SMARCA2-242ENST00000635530 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
SMARCA2-242ENST00000635530 SYMPKQ92797 1274 aaKnown RBP13.05□□□□□ -0.32
SMARCA2-242ENST00000635530 POM121Q96HA1 1249 aa13.05□□□□□ -0.32
SMARCA2-242ENST00000635530 WBP1LQ9NX94 342 aa13.05□□□□□ -0.32
SMARCA2-242ENST00000635530 AP1G2O75843 785 aa13.04□□□□□ -0.32
SMARCA2-242ENST00000635530 USP17L8P0C7I0 530 aa13.04□□□□□ -0.32
SMARCA2-242ENST00000635530 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
SMARCA2-242ENST00000635530 BLOC1S3Q6QNY0 202 aa13.01□□□□□ -0.33
SMARCA2-242ENST00000635530 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
SMARCA2-242ENST00000635530 KCTD12Q96CX2 325 aaKnown RBP13.01□□□□□ -0.33
SMARCA2-242ENST00000635530 COG6Q9Y2V7 657 aa13.01□□□□□ -0.33
SMARCA2-242ENST00000635530 RETREG3Q86VR2 466 aa13□□□□□ -0.33
SMARCA2-242ENST00000635530 PCDHB3Q9Y5E6 796 aa13□□□□□ -0.33
SMARCA2-242ENST00000635530 CTDSPL2Q05D32 466 aa12.99□□□□□ -0.33
SMARCA2-242ENST00000635530 PRR7Q8TB68 274 aa12.99□□□□□ -0.33
SMARCA2-242ENST00000635530 THAP11Q96EK4 314 aa12.99□□□□□ -0.33
SMARCA2-242ENST00000635530 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
SMARCA2-242ENST00000635530 Q3C1V9 767 aa12.98□□□□□ -0.33
SMARCA2-242ENST00000635530 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-242ENST00000635530 GJD4Q96KN9 370 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-242ENST00000635530 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-242ENST00000635530 BRICD5Q6PL45 260 aa12.97□□□□□ -0.33
SMARCA2-242ENST00000635530 SCUBE3Q8IX30 993 aa12.97□□□□□ -0.33
SMARCA2-242ENST00000635530 HMX1Q9NP08 348 aaPredicted RBP12.97□□□□□ -0.33
SMARCA2-242ENST00000635530 HELBQ8NG08 1087 aaPredicted RBP12.96□□□□□ -0.33
SMARCA2-242ENST00000635530 TRAK2O60296 914 aa12.95□□□□□ -0.34
SMARCA2-242ENST00000635530 PROSER2Q86WR7 435 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-242ENST00000635530 C1orf115Q9H7X2 142 aa12.95□□□□□ -0.34
SMARCA2-242ENST00000635530 LRRN4Q8WUT4 740 aa12.94□□□□□ -0.34
SMARCA2-242ENST00000635530 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
SMARCA2-242ENST00000635530 GPR37L1O60883 481 aa12.93□□□□□ -0.34
SMARCA2-242ENST00000635530 NR1I2O75469 434 aa12.93□□□□□ -0.34
SMARCA2-242ENST00000635530 DESI1Q6ICB0 168 aa12.93□□□□□ -0.34
SMARCA2-242ENST00000635530 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-242ENST00000635530 NYAP1Q6ZVC0 841 aa12.92□□□□□ -0.34
SMARCA2-242ENST00000635530 TSC1Q92574 1164 aa12.92□□□□□ -0.34
SMARCA2-242ENST00000635530 USB1Q9BQ65 265 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-242ENST00000635530 TBC1D2BQ9UPU7 963 aa12.92□□□□□ -0.34
SMARCA2-242ENST00000635530 RAD21O60216 631 aa12.91□□□□□ -0.34
SMARCA2-242ENST00000635530 GDPD2Q9HCC8 539 aa12.91□□□□□ -0.34
SMARCA2-242ENST00000635530 FMNL1O95466 1100 aaPredicted RBP12.9□□□□□ -0.34
SMARCA2-242ENST00000635530 ARID3CA6NKF2 412 aa12.88□□□□□ -0.35
SMARCA2-242ENST00000635530 APBB1O00213 710 aa12.88□□□□□ -0.35
SMARCA2-242ENST00000635530 COPS2P61201 443 aa12.88□□□□□ -0.35
SMARCA2-242ENST00000635530 EPS8L1Q8TE68 723 aa12.87□□□□□ -0.35
SMARCA2-242ENST00000635530 MYT1LQ9UL68 1186 aa12.87□□□□□ -0.35
SMARCA2-242ENST00000635530 PTPN5P54829 565 aa12.86□□□□□ -0.35
SMARCA2-242ENST00000635530 MSS51Q4VC12 460 aa12.86□□□□□ -0.35
SMARCA2-242ENST00000635530 LYPD8Q6UX82 237 aa12.86□□□□□ -0.35
SMARCA2-242ENST00000635530 MTRQ99707 1265 aa12.86□□□□□ -0.35
SMARCA2-242ENST00000635530 NDUFB9Q9Y6M9 179 aa12.86□□□□□ -0.35
SMARCA2-242ENST00000635530 FAM160A2Q8N612 972 aaPredicted RBP12.85□□□□□ -0.35
SMARCA2-242ENST00000635530 TLL1O43897 1013 aa12.84□□□□□ -0.35
SMARCA2-242ENST00000635530 JUNDP17535 347 aa12.84□□□□□ -0.35
SMARCA2-242ENST00000635530 IRF5Q13568 498 aa12.84□□□□□ -0.35
SMARCA2-242ENST00000635530 ZPR1O75312 459 aa12.83□□□□□ -0.36
SMARCA2-242ENST00000635530 TJAP1Q5JTD0 557 aa12.83□□□□□ -0.36
SMARCA2-242ENST00000635530 SPSB2Q99619 263 aa12.83□□□□□ -0.36
SMARCA2-242ENST00000635530 ABL2P42684 1182 aa12.82□□□□□ -0.36
SMARCA2-242ENST00000635530 PRDM9Q9NQV7 894 aa12.82□□□□□ -0.36
SMARCA2-242ENST00000635530 DXOO77932 396 aaKnown RBP12.81□□□□□ -0.36
SMARCA2-242ENST00000635530 F12P00748 615 aaPredicted RBP12.81□□□□□ -0.36
SMARCA2-242ENST00000635530 NR6A1Q15406 480 aa12.81□□□□□ -0.36
SMARCA2-242ENST00000635530 PRM3Q9NNZ6 103 aa12.81□□□□□ -0.36
SMARCA2-242ENST00000635530 MMP16P51512 607 aa12.8□□□□□ -0.36
SMARCA2-242ENST00000635530 PTPRNQ16849 979 aa12.8□□□□□ -0.36
SMARCA2-242ENST00000635530 ADH1BP00325 375 aa12.79□□□□□ -0.36
SMARCA2-242ENST00000635530 ZNF516Q92618 1163 aa12.79□□□□□ -0.36
SMARCA2-242ENST00000635530 IL21Q9HBE4 155 aa12.78□□□□□ -0.36
SMARCA2-242ENST00000635530 ZNF777Q9ULD5 760 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-242ENST00000635530 ZNF330Q9Y3S2 320 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-242ENST00000635530 POM121CA8CG34 1229 aa12.76□□□□□ -0.37
SMARCA2-242ENST00000635530 SPNS2Q8IVW8 549 aa12.75□□□□□ -0.37
SMARCA2-242ENST00000635530 MAP10Q9P2G4 905 aa12.75□□□□□ -0.37
SMARCA2-242ENST00000635530 CCDC82Q8N4S0 544 aa12.73□□□□□ -0.37
SMARCA2-242ENST00000635530 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
SMARCA2-242ENST00000635530 CCNYL3P0C7X3 344 aa12.72□□□□□ -0.37
SMARCA2-242ENST00000635530 WWC1Q8IX03 1113 aa12.71□□□□□ -0.37
SMARCA2-242ENST00000635530 NKX2-3Q8TAU0 364 aa12.71□□□□□ -0.37
SMARCA2-242ENST00000635530 NUDT12Q9BQG2 462 aa12.71□□□□□ -0.37
SMARCA2-242ENST00000635530 EVA1BQ9NVM1 165 aa12.7□□□□□ -0.38
SMARCA2-242ENST00000635530 ADAMTS19Q8TE59 1207 aa12.69□□□□□ -0.38
SMARCA2-242ENST00000635530 ARXQ96QS3 562 aa12.69□□□□□ -0.38
SMARCA2-242ENST00000635530 SLC6A16Q9GZN6 736 aa12.69□□□□□ -0.38
SMARCA2-242ENST00000635530 FKBPLQ9UIM3 349 aa12.69□□□□□ -0.38
SMARCA2-242ENST00000635530 VAC14Q08AM6 782 aa12.68□□□□□ -0.38
SMARCA2-242ENST00000635530 WASHC4Q2M389 1173 aa12.68□□□□□ -0.38
SMARCA2-242ENST00000635530 ARID3AQ99856 593 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms