RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 RUNDC1Q96C34 613 aa13.84□□□□□ -0.19
PSPC1-207ENST00000635251 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
PSPC1-207ENST00000635251 NPATQ14207 1427 aa13.84□□□□□ -0.19
PSPC1-207ENST00000635251 SLC4A3P48751 1232 aa13.84□□□□□ -0.19
PSPC1-207ENST00000635251 PDE3AQ14432 1141 aa13.84□□□□□ -0.19
PSPC1-207ENST00000635251 QRICH2Q9H0J4 1663 aa13.83□□□□□ -0.19
PSPC1-207ENST00000635251 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.2
PSPC1-207ENST00000635251 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.2
PSPC1-207ENST00000635251 CFAP53Q96M91 514 aa13.83□□□□□ -0.2
PSPC1-207ENST00000635251 COG6Q9Y2V7 657 aa13.82□□□□□ -0.2
PSPC1-207ENST00000635251 RPGRIP1LQ68CZ1 1315 aa13.82□□□□□ -0.2
PSPC1-207ENST00000635251 PPLO60437 1756 aa13.82□□□□□ -0.2
PSPC1-207ENST00000635251 IGHDP01880 384 aa13.81□□□□□ -0.2
PSPC1-207ENST00000635251 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
PSPC1-207ENST00000635251 PANK1Q8TE04 598 aa13.81□□□□□ -0.2
PSPC1-207ENST00000635251 CLUAP1Q96AJ1 413 aa13.81□□□□□ -0.2
PSPC1-207ENST00000635251 MTHFSP49914 203 aa13.81□□□□□ -0.2
PSPC1-207ENST00000635251 NUTM2DQ5VT03 806 aaPredicted RBP13.81□□□□□ -0.2
PSPC1-207ENST00000635251 CD109Q6YHK3 1445 aa13.8□□□□□ -0.2
PSPC1-207ENST00000635251 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
PSPC1-207ENST00000635251 SHPRHQ149N8 1683 aa13.8□□□□□ -0.2
PSPC1-207ENST00000635251 ZC3H13Q5T200 1668 aaKnown RBP13.8□□□□□ -0.2
PSPC1-207ENST00000635251 CFAP65Q6ZU64 1925 aaKnown RBP13.8□□□□□ -0.2
PSPC1-207ENST00000635251 ADGRB1O14514 1584 aa13.8□□□□□ -0.2
PSPC1-207ENST00000635251 EVC2Q86UK5 1308 aa13.8□□□□□ -0.2
PSPC1-207ENST00000635251 CFAP74Q9C0B2 1584 aa13.79□□□□□ -0.2
PSPC1-207ENST00000635251 FRMPD1Q5SYB0 1578 aa13.78□□□□□ -0.2
PSPC1-207ENST00000635251 MLH3Q9UHC1 1453 aa13.78□□□□□ -0.2
PSPC1-207ENST00000635251 HECW2Q9P2P5 1572 aa13.78□□□□□ -0.2
PSPC1-207ENST00000635251 VGFO15240 615 aaPredicted RBP13.78□□□□□ -0.2
PSPC1-207ENST00000635251 RARSP54136 660 aaKnown RBP13.78□□□□□ -0.2
PSPC1-207ENST00000635251 WDR63Q8IWG1 891 aa13.78□□□□□ -0.2
PSPC1-207ENST00000635251 IQSEC2Q5JU85 1478 aa13.77□□□□□ -0.21
PSPC1-207ENST00000635251 NFKBIBQ15653 356 aa13.76□□□□□ -0.21
PSPC1-207ENST00000635251 MAPK8IP3Q9UPT6 1336 aa13.76□□□□□ -0.21
PSPC1-207ENST00000635251 ABCC3O15438 1527 aa13.76□□□□□ -0.21
PSPC1-207ENST00000635251 U2AF1L5P0DN76 240 aaPredicted RBP13.76□□□□□ -0.21
PSPC1-207ENST00000635251 U2AF1Q01081 240 aaKnown RBP eCLIP13.76□□□□□ -0.21
PSPC1-207ENST00000635251 SAFB2Q14151 953 aaKnown RBP eCLIP13.76□□□□□ -0.21
PSPC1-207ENST00000635251 GLI2P10070 1586 aa13.76□□□□□ -0.21
PSPC1-207ENST00000635251 USP32Q8NFA0 1604 aa13.75□□□□□ -0.21
PSPC1-207ENST00000635251 PMFBP1Q8TBY8 1022 aa13.75□□□□□ -0.21
PSPC1-207ENST00000635251 BCL2L13Q9BXK5 485 aa13.75□□□□□ -0.21
PSPC1-207ENST00000635251 CABP2Q9NPB3 220 aa13.75□□□□□ -0.21
PSPC1-207ENST00000635251 ANKRD36BQ8N2N9 1353 aa13.75□□□□□ -0.21
PSPC1-207ENST00000635251 MYH16Q9H6N6 1097 aa13.75□□□□□ -0.21
PSPC1-207ENST00000635251 CCDC27Q2M243 656 aa13.74□□□□□ -0.21
PSPC1-207ENST00000635251 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
PSPC1-207ENST00000635251 SENP3Q9H4L4 574 aaPredicted RBP13.74□□□□□ -0.21
PSPC1-207ENST00000635251 NSD2O96028 1365 aa13.74□□□□□ -0.21
PSPC1-207ENST00000635251 CAMSAP1Q5T5Y3 1602 aa13.74□□□□□ -0.21
PSPC1-207ENST00000635251 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
PSPC1-207ENST00000635251 AAMPQ13685 434 aa13.73□□□□□ -0.21
PSPC1-207ENST00000635251 TULP4Q9NRJ4 1543 aa13.73□□□□□ -0.21
PSPC1-207ENST00000635251 RAPGEF3O95398 923 aa13.73□□□□□ -0.21
PSPC1-207ENST00000635251 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
PSPC1-207ENST00000635251 SRPK2P78362 688 aaKnown RBP13.72□□□□□ -0.21
PSPC1-207ENST00000635251 STK26Q9P289 416 aa13.72□□□□□ -0.21
PSPC1-207ENST00000635251 RLBP1P12271 317 aa13.71□□□□□ -0.21
PSPC1-207ENST00000635251 ARHGEF28Q8N1W1 1705 aaKnown RBP13.71□□□□□ -0.21
PSPC1-207ENST00000635251 U2SURPO15042 1029 aaKnown RBP13.71□□□□□ -0.21
PSPC1-207ENST00000635251 NEXMIFQ5QGS0 1516 aa13.71□□□□□ -0.22
PSPC1-207ENST00000635251 GSE1Q14687 1217 aa13.7□□□□□ -0.22
PSPC1-207ENST00000635251 SIGLEC1Q9BZZ2 1709 aa13.7□□□□□ -0.22
PSPC1-207ENST00000635251 RWDD1Q9H446 243 aaPredicted RBP13.7□□□□□ -0.22
PSPC1-207ENST00000635251 PCDHB15Q9Y5E8 787 aa13.7□□□□□ -0.22
PSPC1-207ENST00000635251 FTSJ3Q8IY81 847 aaKnown RBP13.69□□□□□ -0.22
PSPC1-207ENST00000635251 IDI1Q13907 227 aa13.69□□□□□ -0.22
PSPC1-207ENST00000635251 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
PSPC1-207ENST00000635251 GGNBP2Q9H3C7 697 aa13.69□□□□□ -0.22
PSPC1-207ENST00000635251 PIK3C2BO00750 1634 aa13.68□□□□□ -0.22
PSPC1-207ENST00000635251 VIRMAQ69YN4 1812 aaKnown RBP13.68□□□□□ -0.22
PSPC1-207ENST00000635251 SEC24BO95487 1268 aa13.68□□□□□ -0.22
PSPC1-207ENST00000635251 NCBP3Q53F19 620 aaKnown RBP13.68□□□□□ -0.22
PSPC1-207ENST00000635251 ZKSCAN2Q63HK3 967 aa13.68□□□□□ -0.22
PSPC1-207ENST00000635251 PDZRN3Q9UPQ7 1066 aa13.68□□□□□ -0.22
PSPC1-207ENST00000635251 A0A1W2PP64 1363 aa13.68□□□□□ -0.22
PSPC1-207ENST00000635251 UPF2Q9HAU5 1272 aaKnown RBP13.67□□□□□ -0.22
PSPC1-207ENST00000635251 USP19O94966 1318 aa13.67□□□□□ -0.22
PSPC1-207ENST00000635251 BECN1Q14457 450 aa13.67□□□□□ -0.22
PSPC1-207ENST00000635251 MVPQ14764 893 aaKnown RBP13.67□□□□□ -0.22
PSPC1-207ENST00000635251 TSR2Q969E8 191 aaKnown RBP13.67□□□□□ -0.22
PSPC1-207ENST00000635251 DZIP1LQ8IYY4 767 aaKnown RBP13.66□□□□□ -0.22
PSPC1-207ENST00000635251 POGKQ9P215 609 aa13.66□□□□□ -0.22
PSPC1-207ENST00000635251 ABCC11Q96J66 1382 aa13.66□□□□□ -0.22
PSPC1-207ENST00000635251 NEO1Q92859 1461 aa13.66□□□□□ -0.22
PSPC1-207ENST00000635251 MINK1Q8N4C8 1332 aaPredicted RBP13.66□□□□□ -0.22
PSPC1-207ENST00000635251 FRAT2O75474 233 aaPredicted RBP13.66□□□□□ -0.22
PSPC1-207ENST00000635251 SMC4Q9NTJ3 1288 aa13.66□□□□□ -0.22
PSPC1-207ENST00000635251 SLC52A1Q9NWF4 448 aa13.66□□□□□ -0.22
PSPC1-207ENST00000635251 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
PSPC1-207ENST00000635251 DIP2CQ9Y2E4 1556 aa13.66□□□□□ -0.22
PSPC1-207ENST00000635251 EXOSC9Q06265 439 aaKnown RBP13.65□□□□□ -0.22
PSPC1-207ENST00000635251 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
PSPC1-207ENST00000635251 ADGRB2O60241 1585 aa13.65□□□□□ -0.22
PSPC1-207ENST00000635251 CT47B1P0C2W7 299 aaPredicted RBP13.65□□□□□ -0.22
PSPC1-207ENST00000635251 TMPOP42166 694 aaKnown RBP13.65□□□□□ -0.22
PSPC1-207ENST00000635251 ARHGAP31Q2M1Z3 1444 aa13.64□□□□□ -0.23
PSPC1-207ENST00000635251 ATAD2Q6PL18 1390 aa13.64□□□□□ -0.23
PSPC1-207ENST00000635251 PRAM1Q96QH2 718 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms