RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 TLL1O43897 1013 aa13.83□□□□□ -0.2
LINC01108-202ENST00000635227 SYMPKQ92797 1274 aaKnown RBP13.83□□□□□ -0.2
LINC01108-202ENST00000635227 THAP11Q96EK4 314 aa13.83□□□□□ -0.2
LINC01108-202ENST00000635227 BRICD5Q6PL45 260 aa13.81□□□□□ -0.2
LINC01108-202ENST00000635227 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC01108-202ENST00000635227 ATP1B4Q9UN42 357 aaPredicted RBP13.81□□□□□ -0.2
LINC01108-202ENST00000635227 KCNC4Q03721 635 aa13.8□□□□□ -0.2
LINC01108-202ENST00000635227 QPCTQ16769 361 aa13.8□□□□□ -0.2
LINC01108-202ENST00000635227 TUSC1Q2TAM9 212 aa13.8□□□□□ -0.2
LINC01108-202ENST00000635227 Q3C1V9 767 aa13.8□□□□□ -0.2
LINC01108-202ENST00000635227 NKX2-3Q8TAU0 364 aa13.8□□□□□ -0.2
LINC01108-202ENST00000635227 CABLES1Q8TDN4 633 aa13.8□□□□□ -0.2
LINC01108-202ENST00000635227 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
LINC01108-202ENST00000635227 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
LINC01108-202ENST00000635227 SALL2Q9Y467 1007 aaPredicted RBP13.79□□□□□ -0.2
LINC01108-202ENST00000635227 C6orf229H3BNL8 230 aa13.78□□□□□ -0.2
LINC01108-202ENST00000635227 FMNL1O95466 1100 aaPredicted RBP13.78□□□□□ -0.2
LINC01108-202ENST00000635227 HRCP23327 699 aa13.78□□□□□ -0.2
LINC01108-202ENST00000635227 LILRB3O75022 631 aa13.77□□□□□ -0.21
LINC01108-202ENST00000635227 SPSB2Q99619 263 aa13.77□□□□□ -0.21
LINC01108-202ENST00000635227 MTMR2Q13614 643 aa13.76□□□□□ -0.21
LINC01108-202ENST00000635227 ZBTB3Q9H5J0 574 aa13.76□□□□□ -0.21
LINC01108-202ENST00000635227 PRPF38BQ5VTL8 546 aaKnown RBP13.75□□□□□ -0.21
LINC01108-202ENST00000635227 ADH1BP00325 375 aa13.74□□□□□ -0.21
LINC01108-202ENST00000635227 PLA2G2EQ9NZK7 142 aa13.74□□□□□ -0.21
LINC01108-202ENST00000635227 NUTM2BA6NNL0 878 aaPredicted RBP13.73□□□□□ -0.21
LINC01108-202ENST00000635227 NUTM2EB1AL46 878 aaPredicted RBP13.73□□□□□ -0.21
LINC01108-202ENST00000635227 RTL5Q5HYW3 569 aaPredicted RBP13.73□□□□□ -0.21
LINC01108-202ENST00000635227 NUTM2DQ5VT03 806 aaPredicted RBP13.73□□□□□ -0.21
LINC01108-202ENST00000635227 NUTM2AQ8IVF1 878 aaPredicted RBP13.73□□□□□ -0.21
LINC01108-202ENST00000635227 FAM160A2Q8N612 972 aaPredicted RBP13.73□□□□□ -0.21
LINC01108-202ENST00000635227 USB1Q9BQ65 265 aaKnown RBP13.73□□□□□ -0.21
LINC01108-202ENST00000635227 RETREG3Q86VR2 466 aa13.72□□□□□ -0.21
LINC01108-202ENST00000635227 PRDM9Q9NQV7 894 aa13.7□□□□□ -0.22
LINC01108-202ENST00000635227 SPDYE5A6NIY4 337 aa13.69□□□□□ -0.22
LINC01108-202ENST00000635227 CFAP99D6REC4 459 aa13.69□□□□□ -0.22
LINC01108-202ENST00000635227 PPP2R2DQ66LE6 453 aa13.69□□□□□ -0.22
LINC01108-202ENST00000635227 PRR7Q8TB68 274 aa13.69□□□□□ -0.22
LINC01108-202ENST00000635227 MSS51Q4VC12 460 aa13.68□□□□□ -0.22
LINC01108-202ENST00000635227 S1PR4O95977 384 aa13.67□□□□□ -0.22
LINC01108-202ENST00000635227 IFFO2Q5TF58 517 aa13.67□□□□□ -0.22
LINC01108-202ENST00000635227 SLC6A16Q9GZN6 736 aa13.67□□□□□ -0.22
LINC01108-202ENST00000635227 RFC5P40937 340 aa13.66□□□□□ -0.22
LINC01108-202ENST00000635227 TSC1Q92574 1164 aa13.63□□□□□ -0.23
LINC01108-202ENST00000635227 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
LINC01108-202ENST00000635227 DXOO77932 396 aaKnown RBP13.61□□□□□ -0.23
LINC01108-202ENST00000635227 JUNDP17535 347 aa13.61□□□□□ -0.23
LINC01108-202ENST00000635227 MMP16P51512 607 aa13.61□□□□□ -0.23
LINC01108-202ENST00000635227 PPEF1O14829 653 aaPredicted RBP13.6□□□□□ -0.23
LINC01108-202ENST00000635227 DESI1Q6ICB0 168 aa13.59□□□□□ -0.23
LINC01108-202ENST00000635227 RNF223E7ERA6 249 aa13.58□□□□□ -0.24
LINC01108-202ENST00000635227 PER1O15534 1290 aaPredicted RBP13.58□□□□□ -0.24
LINC01108-202ENST00000635227 AP1G2O75843 785 aa13.58□□□□□ -0.24
LINC01108-202ENST00000635227 CTDSPL2Q05D32 466 aa13.58□□□□□ -0.24
LINC01108-202ENST00000635227 HELBQ8NG08 1087 aaPredicted RBP13.57□□□□□ -0.24
LINC01108-202ENST00000635227 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.57□□□□□ -0.24
LINC01108-202ENST00000635227 A0A0G2JS52 829 aa13.56□□□□□ -0.24
LINC01108-202ENST00000635227 GGCXP38435 758 aa13.55□□□□□ -0.24
LINC01108-202ENST00000635227 LYPD8Q6UX82 237 aa13.55□□□□□ -0.24
LINC01108-202ENST00000635227 TMEM259Q4ZIN3 620 aa13.54□□□□□ -0.24
LINC01108-202ENST00000635227 FCF1Q9Y324 198 aaKnown RBP13.54□□□□□ -0.24
LINC01108-202ENST00000635227 PTPRNQ16849 979 aa13.52□□□□□ -0.25
LINC01108-202ENST00000635227 LRRN4Q8WUT4 740 aa13.52□□□□□ -0.25
LINC01108-202ENST00000635227 NUDT12Q9BQG2 462 aa13.52□□□□□ -0.25
LINC01108-202ENST00000635227 USP17L8P0C7I0 530 aa13.51□□□□□ -0.25
LINC01108-202ENST00000635227 ANKLE1Q8NAG6 615 aa13.51□□□□□ -0.25
LINC01108-202ENST00000635227 CCDC24Q8N4L8 307 aa13.5□□□□□ -0.25
LINC01108-202ENST00000635227 CCNYL3P0C7X3 344 aa13.49□□□□□ -0.25
LINC01108-202ENST00000635227 PLA2G2CQ5R387 149 aa13.49□□□□□ -0.25
LINC01108-202ENST00000635227 BANK1Q8NDB2 785 aa13.48□□□□□ -0.25
LINC01108-202ENST00000635227 SNRKQ9NRH2 765 aa13.48□□□□□ -0.25
LINC01108-202ENST00000635227 HMX1Q9NP08 348 aaPredicted RBP13.47□□□□□ -0.25
LINC01108-202ENST00000635227 F12P00748 615 aaPredicted RBP13.46□□□□□ -0.25
LINC01108-202ENST00000635227 EVA1BQ9NVM1 165 aa13.46□□□□□ -0.25
LINC01108-202ENST00000635227 MAP10Q9P2G4 905 aa13.46□□□□□ -0.25
LINC01108-202ENST00000635227 PTCRAQ6ISU1 281 aaPredicted RBP13.45□□□□□ -0.26
LINC01108-202ENST00000635227 CTHP32929 405 aa13.44□□□□□ -0.26
LINC01108-202ENST00000635227 EMID1Q96A84 441 aaPredicted RBP13.44□□□□□ -0.26
LINC01108-202ENST00000635227 KCNH2Q12809 1159 aa13.43□□□□□ -0.26
LINC01108-202ENST00000635227 MTMR14Q8NCE2 650 aa13.43□□□□□ -0.26
LINC01108-202ENST00000635227 GTF3C3Q9Y5Q9 886 aa13.43□□□□□ -0.26
LINC01108-202ENST00000635227 EPS8L1Q8TE68 723 aa13.42□□□□□ -0.26
LINC01108-202ENST00000635227 NR6A1Q15406 480 aa13.41□□□□□ -0.26
LINC01108-202ENST00000635227 MCM6Q14566 821 aa13.4□□□□□ -0.26
LINC01108-202ENST00000635227 LIAT1Q6ZQX7 453 aa13.4□□□□□ -0.26
LINC01108-202ENST00000635227 GJD4Q96KN9 370 aaPredicted RBP13.39□□□□□ -0.27
LINC01108-202ENST00000635227 TRIM34Q9BYJ4 488 aa13.39□□□□□ -0.27
LINC01108-202ENST00000635227 UNC93B1Q9H1C4 597 aa13.39□□□□□ -0.27
LINC01108-202ENST00000635227 ZBTB24O43167 697 aaPredicted RBP13.35□□□□□ -0.27
LINC01108-202ENST00000635227 SLC19A1P41440 591 aa13.35□□□□□ -0.27
LINC01108-202ENST00000635227 PRKD2Q9BZL6 878 aa13.35□□□□□ -0.27
LINC01108-202ENST00000635227 FLIIQ13045 1269 aa13.34□□□□□ -0.27
LINC01108-202ENST00000635227 CCDC180Q9P1Z9 1646 aa13.34□□□□□ -0.27
LINC01108-202ENST00000635227 SOCS7O14512 581 aa13.33□□□□□ -0.28
LINC01108-202ENST00000635227 RPIAP49247 311 aa13.33□□□□□ -0.28
LINC01108-202ENST00000635227 TRIM32Q13049 653 aa13.33□□□□□ -0.28
LINC01108-202ENST00000635227 BAP1Q92560 729 aa13.31□□□□□ -0.28
LINC01108-202ENST00000635227 LINC01559Q495D7 138 aa13.3□□□□□ -0.28
LINC01108-202ENST00000635227 SPRYD7Q5W111 196 aa13.29□□□□□ -0.28
LINC01108-202ENST00000635227 FKBPLQ9UIM3 349 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms