RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 BACH2Q9BYV9 841 aa17.09■□□□□ 0.33
BRF1-222ENST00000635152 PPLO60437 1756 aa17.09■□□□□ 0.33
BRF1-222ENST00000635152 EVC2Q86UK5 1308 aa17.08■□□□□ 0.33
BRF1-222ENST00000635152 MYO3AQ8NEV4 1616 aa17.08■□□□□ 0.33
BRF1-222ENST00000635152 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.32
BRF1-222ENST00000635152 POLR3AO14802 1390 aaPredicted RBP17.08■□□□□ 0.32
BRF1-222ENST00000635152 NEO1Q92859 1461 aa17.08■□□□□ 0.32
BRF1-222ENST00000635152 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
BRF1-222ENST00000635152 NKTRP30414 1462 aaKnown RBP17.07■□□□□ 0.32
BRF1-222ENST00000635152 MS4A1P11836 297 aa17.07■□□□□ 0.32
BRF1-222ENST00000635152 SIGLEC1Q9BZZ2 1709 aa17.06■□□□□ 0.32
BRF1-222ENST00000635152 QRICH2Q9H0J4 1663 aa17.06■□□□□ 0.32
BRF1-222ENST00000635152 CAMSAP1Q5T5Y3 1602 aa17.06■□□□□ 0.32
BRF1-222ENST00000635152 SRPK2P78362 688 aaKnown RBP17.06■□□□□ 0.32
BRF1-222ENST00000635152 FBXO31Q5XUX0 539 aaPredicted RBP17.06■□□□□ 0.32
BRF1-222ENST00000635152 TCP11L2Q8N4U5 519 aa17.05■□□□□ 0.32
BRF1-222ENST00000635152 DIP2CQ9Y2E4 1556 aa17.05■□□□□ 0.32
BRF1-222ENST00000635152 KDM2BQ8NHM5 1336 aa17.04■□□□□ 0.32
BRF1-222ENST00000635152 SLC52A1Q9NWF4 448 aa17.03■□□□□ 0.32
BRF1-222ENST00000635152 CENPQQ7L2Z9 268 aaPredicted RBP17.03■□□□□ 0.32
BRF1-222ENST00000635152 GLI2P10070 1586 aa17.03■□□□□ 0.32
BRF1-222ENST00000635152 CANXP27824 592 aaKnown RBP17.03■□□□□ 0.32
BRF1-222ENST00000635152 RUNDC1Q96C34 613 aa17.03■□□□□ 0.32
BRF1-222ENST00000635152 MINK1Q8N4C8 1332 aaPredicted RBP17.02■□□□□ 0.32
BRF1-222ENST00000635152 CFAP53Q96M91 514 aa17.02■□□□□ 0.31
BRF1-222ENST00000635152 NEXMIFQ5QGS0 1516 aa17.02■□□□□ 0.31
BRF1-222ENST00000635152 RGS3P49796 1198 aa17.01■□□□□ 0.31
BRF1-222ENST00000635152 FRAT1Q92837 279 aaPredicted RBP17.01■□□□□ 0.31
BRF1-222ENST00000635152 STAG3Q9UJ98 1225 aa17.01■□□□□ 0.31
BRF1-222ENST00000635152 U2AF1L5P0DN76 240 aaPredicted RBP17.01■□□□□ 0.31
BRF1-222ENST00000635152 U2AF1Q01081 240 aaKnown RBP eCLIP17.01■□□□□ 0.31
BRF1-222ENST00000635152 FAM69CQ0P6D2 419 aa17.01■□□□□ 0.31
BRF1-222ENST00000635152 PRAM1Q96QH2 718 aa17■□□□□ 0.31
BRF1-222ENST00000635152 GGNBP2Q9H3C7 697 aa17■□□□□ 0.31
BRF1-222ENST00000635152 POGKQ9P215 609 aa17■□□□□ 0.31
BRF1-222ENST00000635152 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
BRF1-222ENST00000635152 ANKRD36BQ8N2N9 1353 aa17■□□□□ 0.31
BRF1-222ENST00000635152 NGEFQ8N5V2 710 aa16.99■□□□□ 0.31
BRF1-222ENST00000635152 PANK1Q8TE04 598 aa16.99■□□□□ 0.31
BRF1-222ENST00000635152 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
BRF1-222ENST00000635152 ZC3H13Q5T200 1668 aaKnown RBP16.98■□□□□ 0.31
BRF1-222ENST00000635152 COG6Q9Y2V7 657 aa16.98■□□□□ 0.31
BRF1-222ENST00000635152 ARHGAP31Q2M1Z3 1444 aa16.98■□□□□ 0.31
BRF1-222ENST00000635152 PIK3C2BO00750 1634 aa16.97■□□□□ 0.31
BRF1-222ENST00000635152 A0A1W2PP64 1363 aa16.97■□□□□ 0.31
BRF1-222ENST00000635152 U2SURPO15042 1029 aaKnown RBP16.96■□□□□ 0.31
BRF1-222ENST00000635152 MLECQ14165 292 aa16.96■□□□□ 0.31
BRF1-222ENST00000635152 RICTORQ6R327 1708 aa16.96■□□□□ 0.31
BRF1-222ENST00000635152 ARHGEF28Q8N1W1 1705 aaKnown RBP16.95■□□□□ 0.3
BRF1-222ENST00000635152 PUS7Q96PZ0 661 aaKnown RBP16.95■□□□□ 0.3
BRF1-222ENST00000635152 IGHDP01880 384 aa16.94■□□□□ 0.3
BRF1-222ENST00000635152 SHPRHQ149N8 1683 aa16.94■□□□□ 0.3
BRF1-222ENST00000635152 LAS1LQ9Y4W2 734 aaKnown RBP16.93■□□□□ 0.3
BRF1-222ENST00000635152 RARSP54136 660 aaKnown RBP16.93■□□□□ 0.3
BRF1-222ENST00000635152 TNNQ9UQP3 1299 aa16.93■□□□□ 0.3
BRF1-222ENST00000635152 CLUAP1Q96AJ1 413 aa16.92■□□□□ 0.3
BRF1-222ENST00000635152 PDE3AQ14432 1141 aa16.92■□□□□ 0.3
BRF1-222ENST00000635152 FYB1O15117 783 aa16.91■□□□□ 0.3
BRF1-222ENST00000635152 WDR63Q8IWG1 891 aa16.91■□□□□ 0.3
BRF1-222ENST00000635152 PHF23Q9BUL5 403 aaPredicted RBP16.91■□□□□ 0.3
BRF1-222ENST00000635152 TERF2IPQ9NYB0 399 aa16.91■□□□□ 0.3
BRF1-222ENST00000635152 ZFYVE9O95405 1425 aa16.91■□□□□ 0.3
BRF1-222ENST00000635152 MYO5BQ9ULV0 1848 aa16.91■□□□□ 0.3
BRF1-222ENST00000635152 NSD2O96028 1365 aa16.91■□□□□ 0.3
BRF1-222ENST00000635152 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
BRF1-222ENST00000635152 CABP1Q9NZU7 370 aa16.91■□□□□ 0.3
BRF1-222ENST00000635152 YTHDC2Q9H6S0 1430 aaKnown RBP16.9■□□□□ 0.3
BRF1-222ENST00000635152 ABCC11Q96J66 1382 aa16.9■□□□□ 0.3
BRF1-222ENST00000635152 FAM161AQ3B820 660 aa16.9■□□□□ 0.3
BRF1-222ENST00000635152 WAPLQ7Z5K2 1190 aa16.9■□□□□ 0.3
BRF1-222ENST00000635152 RLBP1P12271 317 aa16.89■□□□□ 0.29
BRF1-222ENST00000635152 C8orf34Q49A92 452 aa16.89■□□□□ 0.29
BRF1-222ENST00000635152 TSR2Q969E8 191 aaKnown RBP16.89■□□□□ 0.29
BRF1-222ENST00000635152 IQSEC2Q5JU85 1478 aa16.89■□□□□ 0.29
BRF1-222ENST00000635152 FBLN1P23142 703 aa16.89■□□□□ 0.29
BRF1-222ENST00000635152 SLC4A3P48751 1232 aa16.88■□□□□ 0.29
BRF1-222ENST00000635152 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.88■□□□□ 0.29
BRF1-222ENST00000635152 PTPRMP28827 1452 aa16.88■□□□□ 0.29
BRF1-222ENST00000635152 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
BRF1-222ENST00000635152 DEKP35659 375 aaKnown RBP16.88■□□□□ 0.29
BRF1-222ENST00000635152 RTL5Q5HYW3 569 aaPredicted RBP16.88■□□□□ 0.29
BRF1-222ENST00000635152 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
BRF1-222ENST00000635152 TMEM131LA2VDJ0 1609 aa16.88■□□□□ 0.29
BRF1-222ENST00000635152 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
BRF1-222ENST00000635152 CCDC27Q2M243 656 aa16.87■□□□□ 0.29
BRF1-222ENST00000635152 MYH16Q9H6N6 1097 aa16.87■□□□□ 0.29
BRF1-222ENST00000635152 USP32Q8NFA0 1604 aa16.87■□□□□ 0.29
BRF1-222ENST00000635152 HDGFL2Q7Z4V5 671 aaPredicted RBP16.87■□□□□ 0.29
BRF1-222ENST00000635152 MAPK8IP3Q9UPT6 1336 aa16.85■□□□□ 0.29
BRF1-222ENST00000635152 NINLQ9Y2I6 1382 aa16.85■□□□□ 0.29
BRF1-222ENST00000635152 TSPOAP1O95153 1857 aa16.84■□□□□ 0.29
BRF1-222ENST00000635152 TMPOP42166 694 aaKnown RBP16.84■□□□□ 0.29
BRF1-222ENST00000635152 PLEKHF1Q96S99 279 aa16.83■□□□□ 0.29
BRF1-222ENST00000635152 DDRGK1Q96HY6 314 aa16.83■□□□□ 0.28
BRF1-222ENST00000635152 PCDHB15Q9Y5E8 787 aa16.83■□□□□ 0.28
BRF1-222ENST00000635152 CD163L1Q9NR16 1453 aa16.83■□□□□ 0.28
BRF1-222ENST00000635152 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
BRF1-222ENST00000635152 EXOSC9Q06265 439 aaKnown RBP16.82■□□□□ 0.28
BRF1-222ENST00000635152 ALKQ9UM73 1620 aa16.82■□□□□ 0.28
BRF1-222ENST00000635152 TRIM35Q9UPQ4 493 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms