RNA–Protein interactions for RNA: ENST00000634338.1

SMARCA2-220, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-220ENST00000634338 KCNA1Q09470 495 aa11.37□□□□□ -0.59
SMARCA2-220ENST00000634338 PPP1R12CQ9BZL4 782 aa11.37□□□□□ -0.59
SMARCA2-220ENST00000634338 CSB-PGBD3P0DP91 1061 aa11.36□□□□□ -0.59
SMARCA2-220ENST00000634338 GUCA2AQ02747 115 aa11.36□□□□□ -0.59
SMARCA2-220ENST00000634338 SLC10A3P09131 477 aa11.35□□□□□ -0.59
SMARCA2-220ENST00000634338 RFX1P22670 979 aa11.35□□□□□ -0.59
SMARCA2-220ENST00000634338 VAC14Q08AM6 782 aa11.35□□□□□ -0.59
SMARCA2-220ENST00000634338 HLA-CQ95604 372 aa11.34□□□□□ -0.59
SMARCA2-220ENST00000634338 ALG2Q9H553 416 aa11.34□□□□□ -0.59
SMARCA2-220ENST00000634338 SOX11P35716 441 aa11.33□□□□□ -0.6
SMARCA2-220ENST00000634338 SWT1Q5T5J6 900 aaKnown RBP11.33□□□□□ -0.6
SMARCA2-220ENST00000634338 LRRN4Q8WUT4 740 aa11.33□□□□□ -0.6
SMARCA2-220ENST00000634338 CFAP99D6REC4 459 aa11.32□□□□□ -0.6
SMARCA2-220ENST00000634338 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
SMARCA2-220ENST00000634338 KCNH8Q96L42 1107 aa11.32□□□□□ -0.6
SMARCA2-220ENST00000634338 KCNK17Q96T54 332 aa11.32□□□□□ -0.6
SMARCA2-220ENST00000634338 KIAA1468Q9P260 1216 aa11.32□□□□□ -0.6
SMARCA2-220ENST00000634338 MTMR7Q9Y216 660 aa11.32□□□□□ -0.6
SMARCA2-220ENST00000634338 PALM3A6NDB9 673 aaPredicted RBP11.31□□□□□ -0.6
SMARCA2-220ENST00000634338 GRIPAP1Q4V328 841 aa11.31□□□□□ -0.6
SMARCA2-220ENST00000634338 TSC1Q92574 1164 aa11.31□□□□□ -0.6
SMARCA2-220ENST00000634338 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
SMARCA2-220ENST00000634338 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-220ENST00000634338 MAMSTRQ6ZN01 415 aa11.29□□□□□ -0.6
SMARCA2-220ENST00000634338 UCN2Q96RP3 112 aa11.29□□□□□ -0.6
SMARCA2-220ENST00000634338 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
SMARCA2-220ENST00000634338 SLC4A3P48751 1232 aa11.28□□□□□ -0.6
SMARCA2-220ENST00000634338 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
SMARCA2-220ENST00000634338 EPS8L1Q8TE68 723 aa11.27□□□□□ -0.61
SMARCA2-220ENST00000634338 SCUBE2Q9NQ36 999 aa11.27□□□□□ -0.61
SMARCA2-220ENST00000634338 RABGEF1Q9UJ41 708 aa11.27□□□□□ -0.61
SMARCA2-220ENST00000634338 FUT2Q10981 343 aa11.26□□□□□ -0.61
SMARCA2-220ENST00000634338 SLF2Q8IX21 1173 aa11.26□□□□□ -0.61
SMARCA2-220ENST00000634338 PRR7Q8TB68 274 aa11.26□□□□□ -0.61
SMARCA2-220ENST00000634338 ATG7O95352 703 aa11.25□□□□□ -0.61
SMARCA2-220ENST00000634338 HDGFP51858 240 aaKnown RBP11.25□□□□□ -0.61
SMARCA2-220ENST00000634338 TFIP11Q9UBB9 837 aaKnown RBP11.25□□□□□ -0.61
SMARCA2-220ENST00000634338 SNPHO15079 494 aa11.23□□□□□ -0.61
SMARCA2-220ENST00000634338 SEMA3FQ13275 785 aa11.23□□□□□ -0.61
SMARCA2-220ENST00000634338 LCE2DQ5TA82 110 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-220ENST00000634338 PNMA1Q8ND90 353 aa11.23□□□□□ -0.61
SMARCA2-220ENST00000634338 SLC4A5Q9BY07 1137 aa11.23□□□□□ -0.61
SMARCA2-220ENST00000634338 MAFBQ9Y5Q3 323 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-220ENST00000634338 CFHP08603 1231 aa11.22□□□□□ -0.61
SMARCA2-220ENST00000634338 ATP6V1AP38606 617 aa11.22□□□□□ -0.61
SMARCA2-220ENST00000634338 NR6A1Q15406 480 aa11.22□□□□□ -0.61
SMARCA2-220ENST00000634338 SEPT9Q9UHD8 586 aaPredicted RBP11.22□□□□□ -0.61
SMARCA2-220ENST00000634338 FAM98CQ17RN3 349 aaKnown RBP11.21□□□□□ -0.61
SMARCA2-220ENST00000634338 TMEM88BA6NKF7 163 aa11.2□□□□□ -0.62
SMARCA2-220ENST00000634338 EIF4G2P78344 907 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMARCA2-220ENST00000634338 FOXD4L5Q5VV16 416 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-220ENST00000634338 RETREG3Q86VR2 466 aa11.2□□□□□ -0.62
SMARCA2-220ENST00000634338 FOXD4L4Q8WXT5 416 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-220ENST00000634338 FAM163AQ96GL9 167 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-220ENST00000634338 VRTNQ9H8Y1 702 aa11.2□□□□□ -0.62
SMARCA2-220ENST00000634338 CARNS1A5YM72 827 aa11.19□□□□□ -0.62
SMARCA2-220ENST00000634338 DESI1Q6ICB0 168 aa11.19□□□□□ -0.62
SMARCA2-220ENST00000634338 SYMPKQ92797 1274 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-220ENST00000634338 IVNS1ABPQ9Y6Y0 642 aa11.19□□□□□ -0.62
SMARCA2-220ENST00000634338 PER1O15534 1290 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-220ENST00000634338 ATP9BO43861 1147 aa11.18□□□□□ -0.62
SMARCA2-220ENST00000634338 PSEN2P49810 448 aa11.18□□□□□ -0.62
SMARCA2-220ENST00000634338 TBC1D9Q6ZT07 1266 aa11.17□□□□□ -0.62
SMARCA2-220ENST00000634338 KMT5BQ4FZB7 885 aa11.16□□□□□ -0.62
SMARCA2-220ENST00000634338 SAMD7Q7Z3H4 446 aa11.16□□□□□ -0.62
SMARCA2-220ENST00000634338 ARHGAP33O14559 1287 aa11.15□□□□□ -0.62
SMARCA2-220ENST00000634338 NR1H3Q13133 447 aa11.15□□□□□ -0.62
SMARCA2-220ENST00000634338 CDCA8Q53HL2 280 aa11.15□□□□□ -0.62
SMARCA2-220ENST00000634338 SND1Q7KZF4 910 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMARCA2-220ENST00000634338 RBM25P49756 843 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-220ENST00000634338 CCDC27Q2M243 656 aa11.14□□□□□ -0.63
SMARCA2-220ENST00000634338 B4GALNT3Q6L9W6 998 aa11.14□□□□□ -0.63
SMARCA2-220ENST00000634338 LAPTM4BQ86VI4 370 aa11.14□□□□□ -0.63
SMARCA2-220ENST00000634338 ELOAQ14241 798 aaKnown RBP11.13□□□□□ -0.63
SMARCA2-220ENST00000634338 Q3C1V9 767 aa11.13□□□□□ -0.63
SMARCA2-220ENST00000634338 MORN1Q5T089 497 aa11.13□□□□□ -0.63
SMARCA2-220ENST00000634338 LYPD8Q6UX82 237 aa11.12□□□□□ -0.63
SMARCA2-220ENST00000634338 NFATC2IPQ8NCF5 419 aa11.12□□□□□ -0.63
SMARCA2-220ENST00000634338 GNEQ9Y223 722 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-220ENST00000634338 KANK4Q5T7N3 995 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-220ENST00000634338 ZNF428Q96B54 188 aa11.11□□□□□ -0.63
SMARCA2-220ENST00000634338 AMOTL2Q9Y2J4 779 aa11.11□□□□□ -0.63
SMARCA2-220ENST00000634338 RNF40O75150 1001 aa11.1□□□□□ -0.63
SMARCA2-220ENST00000634338 ZBBXA8MT70 800 aa11.09□□□□□ -0.63
SMARCA2-220ENST00000634338 ACTN4O43707 911 aaKnown RBP11.09□□□□□ -0.63
SMARCA2-220ENST00000634338 FBXO45P0C2W1 286 aa11.09□□□□□ -0.63
SMARCA2-220ENST00000634338 DMRTA1Q5VZB9 504 aa11.09□□□□□ -0.63
SMARCA2-220ENST00000634338 POTEEQ6S8J3 1075 aa11.09□□□□□ -0.63
SMARCA2-220ENST00000634338 NBPF3Q9H094 633 aa11.09□□□□□ -0.63
SMARCA2-220ENST00000634338 VPS9D1Q9Y2B5 631 aa11.09□□□□□ -0.63
SMARCA2-220ENST00000634338 SLC27A5Q9Y2P5 690 aa11.09□□□□□ -0.63
SMARCA2-220ENST00000634338 ZC3H4Q9UPT8 1303 aaKnown RBP11.08□□□□□ -0.64
SMARCA2-220ENST00000634338 PBX2P40425 430 aa11.07□□□□□ -0.64
SMARCA2-220ENST00000634338 FKBPLQ9UIM3 349 aa11.07□□□□□ -0.64
SMARCA2-220ENST00000634338 ZMIZ1Q9ULJ6 1067 aa11.07□□□□□ -0.64
SMARCA2-220ENST00000634338 PUS10Q3MIT2 529 aaKnown RBP11.06□□□□□ -0.64
SMARCA2-220ENST00000634338 PLEKHM2Q8IWE5 1019 aa11.06□□□□□ -0.64
SMARCA2-220ENST00000634338 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
SMARCA2-220ENST00000634338 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
SMARCA2-220ENST00000634338 E9PSI1 815 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms